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Mouse SNP Summary
Symbol
Name
ID 		Rr587961
regulatory region 587961
MGI:8050093

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/J
AKR
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258254803
MGI SNP Detail		 Chr3:156265679 4930570G19Rik within coordinates of
Rr587959 within coordinates of
Rr587961 1938 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224172067
MGI SNP Detail		 Chr3:156265737 4930570G19Rik within coordinates of
Rr587959 within coordinates of
Rr587961 1880 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585141863
MGI SNP Detail		 Chr3:156265894 4930570G19Rik within coordinates of
Rr587959 within coordinates of
Rr587961 1723 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs587291675
MGI SNP Detail		 Chr3:156265916 4930570G19Rik within coordinates of
Rr587959 within coordinates of
Rr587961 1701 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244282269
MGI SNP Detail		 Chr3:156266036 4930570G19Rik within coordinates of
Rr587959 within coordinates of
Rr587961 1581 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs51477608
MGI SNP Detail		 Chr3:156266052 4930570G19Rik within coordinates of
Rr587959 within coordinates of
Rr587961 1565 bp proximal
 SNP C C
rs260674097
MGI SNP Detail		 Chr3:156266059 4930570G19Rik within coordinates of
Rr587959 within coordinates of
Rr587961 1558 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235067830
MGI SNP Detail		 Chr3:156266078 4930570G19Rik within coordinates of
Rr587959 within coordinates of
Rr587961 1539 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252406803
MGI SNP Detail
Alliance Variant		 Chr3:156266121 4930570G19Rik within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1496 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs217386000
MGI SNP Detail
Alliance Variant		 Chr3:156266156 4930570G19Rik within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1461 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs256590979
MGI SNP Detail
Alliance Variant		 Chr3:156266358 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1259 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212390701
MGI SNP Detail
Alliance Variant		 Chr3:156266381 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1236 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231025082
MGI SNP Detail
Alliance Variant		 Chr3:156266411 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1206 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252899416
MGI SNP Detail
Alliance Variant		 Chr3:156266420 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1197 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30509988
MGI SNP Detail
Alliance Variant		 Chr3:156266524 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1093 bp proximal
 SNP C/T T T C C C
rs30750613
MGI SNP Detail
Alliance Variant		 Chr3:156266529 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1088 bp proximal
 SNP A/C C C A A A
rs258378879
MGI SNP Detail
Alliance Variant		 Chr3:156266544 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1073 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224895348
MGI SNP Detail
Alliance Variant		 Chr3:156266545 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 1072 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G A G G G G
rs242899357
MGI SNP Detail
Alliance Variant		 Chr3:156266770 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 847 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs251892299
MGI SNP Detail
Alliance Variant		 Chr3:156266794 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 823 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581276679
MGI SNP Detail
Alliance Variant		 Chr3:156266874 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 743 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs584479424
MGI SNP Detail
Alliance Variant		 Chr3:156266877 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 740 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs578744682
MGI SNP Detail
Alliance Variant		 Chr3:156266973 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 644 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G
rs581975785
MGI SNP Detail
Alliance Variant		 Chr3:156266978 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 639 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs387578249
MGI SNP Detail
Alliance Variant		 Chr3:156266983 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 634 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A G A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/J
AKR
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs386955710
MGI SNP Detail
Alliance Variant		 Chr3:156266988 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 629 bp proximal
 SNP A/G A A A A G A A A A A A A A A A A A A G A A A A A A
rs218066509
MGI SNP Detail
Alliance Variant		 Chr3:156267173 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 444 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238005773
MGI SNP Detail
Alliance Variant		 Chr3:156267222 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587959 within coordinates of
Rr587961 395 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260625035
MGI SNP Detail
Alliance Variant		 Chr3:156267287 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587960 within coordinates of
Rr587961 330 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52369876
MGI SNP Detail
Alliance Variant		 Chr3:156267383 4930570G19Rik within coordinates of
Cpgi13974 within coordinates of
Negr1 mRNA-UTR
Rr587960 within coordinates of
Rr587961 234 bp proximal
 SNP C/T T C
rs247898018
MGI SNP Detail
Alliance Variant		 Chr3:156267933 Cpgi13974 within coordinates of
Negr1 Coding-Synonymous
Rr587961 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs3090130
MGI SNP Detail
Alliance Variant		 Chr3:156268051 Cpgi13974 within coordinates of
Negr1 Intron
Rr587961 within coordinates of
 SNP C/T T T T T T T C T
rs3090131
MGI SNP Detail
Alliance Variant		 Chr3:156268070 Cpgi13974 within coordinates of
Negr1 Intron
Rr587961 within coordinates of
 SNP A/G A A A A A A G A
rs244736272
MGI SNP Detail
Alliance Variant		 Chr3:156268180 Cpgi13974 within coordinates of
Negr1 Intron
Rr587961 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31329628
MGI SNP Detail
Alliance Variant		 Chr3:156268206 Cpgi13974 within coordinates of
Negr1 Intron
Rr587961 within coordinates of
 SNP A/T A A T T T
rs224720103
MGI SNP Detail
Alliance Variant		 Chr3:156268214 Cpgi13974 within coordinates of
Negr1 Intron
Rr587961 within coordinates of
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C C C C C C C C C G C C C T
rs247009155
MGI SNP Detail
Alliance Variant		 Chr3:156268262 Cpgi13974 within coordinates of
Negr1 Intron
Rr587961 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31488077
MGI SNP Detail
Alliance Variant		 Chr3:156268278 Negr1 Intron
Rr587961 within coordinates of
 SNP A/G G G A A A
rs238297494
MGI SNP Detail
Alliance Variant		 Chr3:156268426 Negr1 Intron
Rr587961 within coordinates of
Tssr32481 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262708493
MGI SNP Detail
Alliance Variant		 Chr3:156268451 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216330393
MGI SNP Detail
Alliance Variant		 Chr3:156268470 Negr1 Intron
Rr587961 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G G G G G G G G G T G G G G
rs237747225
MGI SNP Detail
Alliance Variant		 Chr3:156268511 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs33862728
MGI SNP Detail
Alliance Variant		 Chr3:156268527 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T T T C C C
rs30453765
MGI SNP Detail
Alliance Variant		 Chr3:156268595 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T T T C C C
rs31009471
MGI SNP Detail
Alliance Variant		 Chr3:156268631 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T C C T T T
rs254321138
MGI SNP Detail
Alliance Variant		 Chr3:156268653 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227117362
MGI SNP Detail
Alliance Variant		 Chr3:156268687 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs245252921
MGI SNP Detail
Alliance Variant		 Chr3:156268742 Negr1 Intron
Rr587961 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs265727280
MGI SNP Detail
Alliance Variant		 Chr3:156268780 Negr1 Intron
Rr587961 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs230075984
MGI SNP Detail
Alliance Variant		 Chr3:156268799 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/J
AKR
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238512800
MGI SNP Detail
Alliance Variant		 Chr3:156268821 Negr1 Intron
Rr587961 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs582963319
MGI SNP Detail
Alliance Variant		 Chr3:156268964 Negr1 Intron
Rr587961 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs30412272
MGI SNP Detail
Alliance Variant		 Chr3:156269010 Negr1 Intron
Rr587961 within coordinates of
 SNP C/T C C T T C C C
rs224648187
MGI SNP Detail
Alliance Variant		 Chr3:156269048 Negr1 Intron
Rr587961 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs246947047
MGI SNP Detail
Alliance Variant		 Chr3:156269107 Negr1 Intron
Rr587961 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219658175
MGI SNP Detail
Alliance Variant		 Chr3:156269187 Negr1 Intron
Rr587961 within coordinates of
 SNP A/C A A A A C A C A A A A A A A A A A C A A A C A A A A C A A A A A
rs232553142
MGI SNP Detail
Alliance Variant		 Chr3:156269188 Negr1 Intron
Rr587961 within coordinates of
 SNP A/C A A A A A C A A A A A A A A A A A A C A A A A A A A A A C A A A A A
rs253541807
MGI SNP Detail
Alliance Variant		 Chr3:156269189 Negr1 Intron
Rr587961 within coordinates of
 SNP A/C A A A A A C A A A A A A A A A C A A A C A A A A A A A A A C A A A A A A A
rs50856278
MGI SNP Detail
Alliance Variant		 Chr3:156269217 Negr1 Intron
Rr587961 within coordinates of
 SNP A/C C A C C C
rs231284202
MGI SNP Detail
Alliance Variant		 Chr3:156269234 Negr1 Intron
Rr587961 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs251733787
MGI SNP Detail
Alliance Variant		 Chr3:156269337 Negr1 Intron
Rr587961 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A C A A A C A A A A A A A A A A A A A A C A A A A
rs211837427
MGI SNP Detail
Alliance Variant		 Chr3:156269446 Negr1 Intron
Rr587961 101 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs31383990
MGI SNP Detail
Alliance Variant		 Chr3:156269576 Negr1 Intron
Rr587961 231 bp distal
 SNP C/T C C T T C C C
rs254230050
MGI SNP Detail
Alliance Variant		 Chr3:156269578 Negr1 Intron
Rr587961 233 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226590012
MGI SNP Detail
Alliance Variant		 Chr3:156269599 Negr1 Intron
Rr587961 254 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30502724
MGI SNP Detail
Alliance Variant		 Chr3:156269628 Negr1 Intron
Rr587961 283 bp distal
 SNP C/T T T C C T T T
rs259454969
MGI SNP Detail
Alliance Variant		 Chr3:156269635 Negr1 Intron
Rr587961 290 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222159040
MGI SNP Detail
Alliance Variant		 Chr3:156269657 Negr1 Intron
Rr587961 312 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238446127
MGI SNP Detail
Alliance Variant		 Chr3:156269666 Negr1 Intron
Rr587961 321 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254004976
MGI SNP Detail
Alliance Variant		 Chr3:156269693 Negr1 Intron
Rr587961 348 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A A A A A A A A A G A A A A
rs218808698
MGI SNP Detail
Alliance Variant		 Chr3:156269694 Negr1 Intron
Rr587961 349 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31032813
MGI SNP Detail
Alliance Variant		 Chr3:156269775 Negr1 Intron
Rr587961 430 bp distal
 SNP C/G C C G G C C C
rs586430533
MGI SNP Detail
Alliance Variant		 Chr3:156269808 Negr1 Intron
Rr587961 463 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs266207547
MGI SNP Detail
Alliance Variant		 Chr3:156269895 Negr1 Intron
Rr587961 550 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A A A A A A A A A T A A A A
rs231920367
MGI SNP Detail
Alliance Variant		 Chr3:156269898 Negr1 Intron
Rr587961 553 bp distal
 SNP A/G/T G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/J
AKR
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258682774
MGI SNP Detail
Alliance Variant		 Chr3:156269920 Negr1 Intron
Rr587961 575 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262566660
MGI SNP Detail
Alliance Variant		 Chr3:156269935 Negr1 Intron
Rr587961 590 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs226992056
MGI SNP Detail
Alliance Variant		 Chr3:156269956 Negr1 Intron
Rr587961 611 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs30199911
MGI SNP Detail
Alliance Variant		 Chr3:156269962 Negr1 Intron
Rr587961 617 bp distal
 SNP C/T T C C T T T
rs211777769
MGI SNP Detail
Alliance Variant		 Chr3:156269970 Negr1 Intron
Rr587961 625 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs230369667
MGI SNP Detail
Alliance Variant		 Chr3:156270035 Negr1 Intron
Rr587961 690 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253735057
MGI SNP Detail
Alliance Variant		 Chr3:156270048 Negr1 Intron
Rr587961 703 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218895460
MGI SNP Detail
Alliance Variant		 Chr3:156270076 Negr1 Intron
Rr587961 731 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs237758874
MGI SNP Detail
Alliance Variant		 Chr3:156270138 Negr1 Intron
Rr587961 793 bp distal
 SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C A C C C C C A C C C C C C C C C C C C C C T C C C C
rs263310737
MGI SNP Detail
Alliance Variant		 Chr3:156270147 Negr1 Intron
Rr587961 802 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222546318
MGI SNP Detail
Alliance Variant		 Chr3:156270156 Negr1 Intron
Rr587961 811 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs232145956
MGI SNP Detail
Alliance Variant		 Chr3:156270167 Negr1 Intron
Rr587961 822 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs248211841
MGI SNP Detail
Alliance Variant		 Chr3:156270246 Negr1 Intron
Rr587961 901 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs218748269
MGI SNP Detail
Alliance Variant		 Chr3:156270304 Negr1 Intron
Rr587961 959 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs582497205
MGI SNP Detail
Alliance Variant		 Chr3:156270321 Negr1 Intron
Rr587961 976 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs240969747
MGI SNP Detail
Alliance Variant		 Chr3:156270438 Negr1 Intron
Rr587961 1093 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264514768
MGI SNP Detail
Alliance Variant		 Chr3:156270549 Negr1 Intron
Rr587961 1204 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224489344
MGI SNP Detail
Alliance Variant		 Chr3:156270605 Negr1 Intron
Rr587961 1260 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246731452
MGI SNP Detail
Alliance Variant		 Chr3:156270641 Negr1 Intron
Rr587961 1296 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265156095
MGI SNP Detail
Alliance Variant		 Chr3:156270670 Negr1 Intron
Rr587961 1325 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226935435
MGI SNP Detail
Alliance Variant		 Chr3:156270680 Negr1 Intron
Rr587961 1335 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243902526
MGI SNP Detail
Alliance Variant		 Chr3:156270697 Negr1 Intron
Rr587961 1352 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255696839
MGI SNP Detail
Alliance Variant		 Chr3:156270710 Negr1 Intron
Rr587961 1365 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224681206
MGI SNP Detail
Alliance Variant		 Chr3:156270720 Negr1 Intron
Rr587961 1375 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258908399
MGI SNP Detail
Alliance Variant		 Chr3:156270749 Negr1 Intron
Rr587961 1404 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
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Showing SNP(s) 1 - 100 of 111
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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