Rr588123 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr588123
regulatory region 588123
MGI:8050255

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Showing SNP(s) 1 - 51 of 51

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SNPs to Text File

SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs37573200 MGI SNP Detail Alliance Variant	Chr3:159221492	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1839 bp proximal	SNP	C/T		T			T	T		T		T			T								T					T	T			T					T	T				T		T												C
rs221646610 MGI SNP Detail Alliance Variant	Chr3:159221619	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1712 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A		A	A	A		A		A	A	A	A	A	A	A
rs246390945 MGI SNP Detail Alliance Variant	Chr3:159221629	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1702 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	A	C	C	A	C	C	C	C	A	C	C	C	C	C	C		C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs36411255 MGI SNP Detail Alliance Variant	Chr3:159221832	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1499 bp proximal	SNP	A/G		G			G	G		G		G			G								A					G	G			G					G	G				G		G												G
rs228222184 MGI SNP Detail Alliance Variant	Chr3:159221844	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1487 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs38232016 MGI SNP Detail Alliance Variant	Chr3:159221845	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1486 bp proximal	SNP	G/T		T			T	T		T		T			T								G					T	T			T					T	T				T		T												T
rs260717453 MGI SNP Detail Alliance Variant	Chr3:159221869	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1462 bp proximal	SNP	C/T	C	C			C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C		C	C	C		C	C	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C
rs229371161 MGI SNP Detail Alliance Variant	Chr3:159221870	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1461 bp proximal	SNP	C/T	C	C			C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C		C	C	C		C	C	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C
rs246714889 MGI SNP Detail Alliance Variant	Chr3:159221879	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1452 bp proximal	SNP	A/G	A	A			A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		G	A	A	A	A
rs215058052 MGI SNP Detail Alliance Variant	Chr3:159221940	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1391 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A		A		A		T	A	A	A	A
rs30662046 MGI SNP Detail Alliance Variant	Chr3:159221953	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1378 bp proximal	SNP	G/T		G		G	T	T		T		G			T			T					T					T	T			G						T																		T
rs37555271 MGI SNP Detail Alliance Variant	Chr3:159221975	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1356 bp proximal	SNP	A/T		A			A	A		A		A			A								T					A	A			A					A	A				A		A												A
rs255178573 MGI SNP Detail Alliance Variant	Chr3:159222059	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1272 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs214752951 MGI SNP Detail Alliance Variant	Chr3:159222062	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1269 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs235829640 MGI SNP Detail Alliance Variant	Chr3:159222192	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1139 bp proximal	SNP	A/G	G	G			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G		G	G	G	G	A	G	G	G	G
rs248607936 MGI SNP Detail Alliance Variant	Chr3:159222222	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1109 bp proximal	SNP	A/C	A	A			A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs6381443 MGI SNP Detail Alliance Variant	Chr3:159222226	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1105 bp proximal	SNP	C/T																C								T
rs234947298 MGI SNP Detail Alliance Variant	Chr3:159222380	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 951 bp proximal	SNP	A/G	G	G			G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G	G		G		G		A	G	G	G	G
rs583034872 MGI SNP Detail Alliance Variant	Chr3:159222515	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 816 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs586771944 MGI SNP Detail Alliance Variant	Chr3:159222663	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 668 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A		A	A	A	A
rs36613172 MGI SNP Detail Alliance Variant	Chr3:159222692	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 639 bp proximal	SNP	A/G		G			G	G		G		G			G								A					G	G			G					G	G				G		G												G
rs38296107 MGI SNP Detail Alliance Variant	Chr3:159223028	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 303 bp proximal	SNP	G/T		T			T	T		T		T			T								G					T	T			T					T	T				T														T
rs36313297 MGI SNP Detail Alliance Variant	Chr3:159223092	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 239 bp proximal	SNP	A/G		A			A	A		A		A			A								A					A	A			A						A				A		G												A
rs243494119 MGI SNP Detail Alliance Variant	Chr3:159223190	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 141 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs580978157 MGI SNP Detail Alliance Variant	Chr3:159223334	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 within coordinates of	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs262643086 MGI SNP Detail Alliance Variant	Chr3:159223378	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 26 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs220885807 MGI SNP Detail Alliance Variant	Chr3:159223444	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 92 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs245506825 MGI SNP Detail Alliance Variant	Chr3:159223494	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 142 bp distal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs260687455 MGI SNP Detail Alliance Variant	Chr3:159223593	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 241 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs229337851 MGI SNP Detail Alliance Variant	Chr3:159223787	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 435 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs240643097 MGI SNP Detail Alliance Variant	Chr3:159223797	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 445 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs36923900 MGI SNP Detail Alliance Variant	Chr3:159223808	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 456 bp distal	SNP	A/G		A			A	A		A		A			A								G					A	A			A					A	A				A		G												A
rs232893978 MGI SNP Detail Alliance Variant	Chr3:159223867	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 515 bp distal	SNP	C/T	T	T			T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T		T		T		C	T	T		T
rs583421249 MGI SNP Detail Alliance Variant	Chr3:159223893	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 541 bp distal	SNP	C/T	C	C			C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C		C		T	C	C	C	C
rs37095805 MGI SNP Detail Alliance Variant	Chr3:159224184	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 832 bp distal	SNP	C/G		C			C	C		C		C			C								G					C	C			C					C	C				C		C												C
rs215026473 MGI SNP Detail Alliance Variant	Chr3:159224401	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1049 bp distal	SNP	A/G	G	G			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G
rs227593879 MGI SNP Detail Alliance Variant	Chr3:159224475	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1123 bp distal	SNP	A/G	A	A			A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs37431974 MGI SNP Detail Alliance Variant	Chr3:159224543	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1191 bp distal	SNP	C/T		T			T	T		T		T			T								C					T	T			T					C	T				T		C												T
rs36982719 MGI SNP Detail Alliance Variant	Chr3:159224718	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1366 bp distal	SNP	G/T		G			G	G		G		G			G								T					G	G			G					G	G				G		G												G
rs234854278 MGI SNP Detail Alliance Variant	Chr3:159224850	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1498 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs250986545 MGI SNP Detail Alliance Variant	Chr3:159224957	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1605 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs216431726 MGI SNP Detail Alliance Variant	Chr3:159224973	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1621 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs237811366 MGI SNP Detail Alliance Variant	Chr3:159225012	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1660 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs258114191 MGI SNP Detail Alliance Variant	Chr3:159225013	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1661 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs220474130 MGI SNP Detail Alliance Variant	Chr3:159225019	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1667 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs238443731 MGI SNP Detail Alliance Variant	Chr3:159225084	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1732 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs254824310 MGI SNP Detail Alliance Variant	Chr3:159225150	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1798 bp distal	SNP	A/G	G	G			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs223491067 MGI SNP Detail Alliance Variant	Chr3:159225222	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1870 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs240608167 MGI SNP Detail Alliance Variant	Chr3:159225260	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1908 bp distal	SNP	C/T	C	C			C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs36799883 MGI SNP Detail Alliance Variant	Chr3:159225286	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1934 bp distal	SNP	A/G		A			A	A		A		A			A								G					A	A			A					G	A				A		G												A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs230164262 MGI SNP Detail Alliance Variant	Chr3:159225328	Depdc1a Intron Depdc1a Noncoding-Transcript-Variant Rr588123 1976 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		A	C	C	C	C

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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