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Mouse SNP Summary
Symbol
Name
ID 		Rr588567
regulatory region 588567
MGI:8050699

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225247895
MGI SNP Detail
Alliance Variant		 Chr4:8704931 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588565 within coordinates of
Rr588567 1889 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs27676106
MGI SNP Detail
Alliance Variant		 Chr4:8704961 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588565 within coordinates of
Rr588567 1859 bp proximal
 SNP G/T T T T T T G T T G T T T G T
rs27676105
MGI SNP Detail
Alliance Variant		 Chr4:8705112 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588565 within coordinates of
Rr588567 1708 bp proximal
 SNP C/T C C C C C C C C C C C C T C
rs218348040
MGI SNP Detail
Alliance Variant		 Chr4:8705233 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1587 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238125729
MGI SNP Detail
Alliance Variant		 Chr4:8705248 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1572 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs260720464
MGI SNP Detail
Alliance Variant		 Chr4:8705276 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1544 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27676104
MGI SNP Detail
Alliance Variant		 Chr4:8705302 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1518 bp proximal
 SNP C/T T T T T T C T T T T T T C T
rs252262132
MGI SNP Detail
Alliance Variant		 Chr4:8705337 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1483 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265668968
MGI SNP Detail
Alliance Variant		 Chr4:8705340 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1480 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229735641
MGI SNP Detail
Alliance Variant		 Chr4:8705357 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1463 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256171290
MGI SNP Detail
Alliance Variant		 Chr4:8705471 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1349 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs211823876
MGI SNP Detail
Alliance Variant		 Chr4:8705472 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1348 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs27676103
MGI SNP Detail
Alliance Variant		 Chr4:8705517 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1303 bp proximal
 SNP C/T T T T T T T T T T T T T C T
rs27676102
MGI SNP Detail
Alliance Variant		 Chr4:8705564 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1256 bp proximal
 SNP C/T C C C C C C C C C C C C T C
rs246379654
MGI SNP Detail
Alliance Variant		 Chr4:8705612 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1208 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217110210
MGI SNP Detail
Alliance Variant		 Chr4:8705661 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1159 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235476510
MGI SNP Detail
Alliance Variant		 Chr4:8705662 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1158 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259012920
MGI SNP Detail
Alliance Variant		 Chr4:8705670 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1150 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C C C C C C C C G C C C C C C C G C C C C
rs27676101
MGI SNP Detail
Alliance Variant		 Chr4:8705687 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1133 bp proximal
 SNP C/T T T T T T C T T T T T T C T
rs236456421
MGI SNP Detail
Alliance Variant		 Chr4:8705689 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1131 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs262625582
MGI SNP Detail
Alliance Variant		 Chr4:8705759 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1061 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218295295
MGI SNP Detail
Alliance Variant		 Chr4:8705803 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 1017 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G
rs27676100
MGI SNP Detail
Alliance Variant		 Chr4:8705833 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 987 bp proximal
 SNP C/T T T T T C T C T T C T T T C T
rs260669559
MGI SNP Detail
Alliance Variant		 Chr4:8705959 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 861 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223524794
MGI SNP Detail
Alliance Variant		 Chr4:8705974 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 846 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247937677
MGI SNP Detail
Alliance Variant		 Chr4:8706014 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 806 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263552711
MGI SNP Detail
Alliance Variant		 Chr4:8706055 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 765 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230214262
MGI SNP Detail
Alliance Variant		 Chr4:8706075 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 745 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243942574
MGI SNP Detail
Alliance Variant		 Chr4:8706081 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 739 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27676099
MGI SNP Detail
Alliance Variant		 Chr4:8706084 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 736 bp proximal
 SNP C/T T T T T T C T T C T T T C T
rs224046773
MGI SNP Detail
Alliance Variant		 Chr4:8706294 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588566 within coordinates of
Rr588567 526 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246506204
MGI SNP Detail
Alliance Variant		 Chr4:8706379 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 441 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs217055296
MGI SNP Detail
Alliance Variant		 Chr4:8706409 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 411 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583759829
MGI SNP Detail
Alliance Variant		 Chr4:8706419 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 401 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27676098
MGI SNP Detail
Alliance Variant		 Chr4:8706439 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 381 bp proximal
 SNP C/T C C C C C T C C C C C T C
rs231358876
MGI SNP Detail
Alliance Variant		 Chr4:8706450 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 370 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257907444
MGI SNP Detail
Alliance Variant		 Chr4:8706472 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 348 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217263597
MGI SNP Detail
Alliance Variant		 Chr4:8706547 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 273 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238610477
MGI SNP Detail
Alliance Variant		 Chr4:8706562 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 258 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27676097
MGI SNP Detail
Alliance Variant		 Chr4:8706603 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 217 bp proximal
 SNP C/G G G G G G G G G G G G G G C
rs212362017
MGI SNP Detail
Alliance Variant		 Chr4:8706655 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 165 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587112838
MGI SNP Detail
Alliance Variant		 Chr4:8706764 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 56 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs230807614
MGI SNP Detail
Alliance Variant		 Chr4:8706800 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 20 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254596455
MGI SNP Detail
Alliance Variant		 Chr4:8706869 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27676096
MGI SNP Detail
Alliance Variant		 Chr4:8706951 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP C/G C C C C C G C C C C C C G C
rs245316765
MGI SNP Detail
Alliance Variant		 Chr4:8706963 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs579862861
MGI SNP Detail
Alliance Variant		 Chr4:8706996 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263412516
MGI SNP Detail
Alliance Variant		 Chr4:8707018 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP A/C/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs583463717
MGI SNP Detail
Alliance Variant		 Chr4:8707024 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27676095
MGI SNP Detail
Alliance Variant		 Chr4:8707030 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP A/G G G G G G A G G G G G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586513885
MGI SNP Detail
Alliance Variant		 Chr4:8707057 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246861242
MGI SNP Detail
Alliance Variant		 Chr4:8707066 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253754044
MGI SNP Detail
Alliance Variant		 Chr4:8707076 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 10 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224222004
MGI SNP Detail
Alliance Variant		 Chr4:8707094 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 28 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27676094
MGI SNP Detail
Alliance Variant		 Chr4:8707097 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 31 bp distal
 SNP C/T T T T T C T T T T T T
rs259628704
MGI SNP Detail
Alliance Variant		 Chr4:8707106 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 40 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs27676093
MGI SNP Detail
Alliance Variant		 Chr4:8707171 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 105 bp distal
 SNP A/G A A A A A G A A A A A A G A
rs252788126
MGI SNP Detail
Alliance Variant		 Chr4:8707178 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 112 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs213845376
MGI SNP Detail
Alliance Variant		 Chr4:8707197 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 131 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230430013
MGI SNP Detail
Alliance Variant		 Chr4:8707229 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 163 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs246084329
MGI SNP Detail
Alliance Variant		 Chr4:8707244 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 178 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212489403
MGI SNP Detail
Alliance Variant		 Chr4:8707272 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 206 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs230978181
MGI SNP Detail
Alliance Variant		 Chr4:8707274 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 208 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254743448
MGI SNP Detail
Alliance Variant		 Chr4:8707320 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 254 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219428284
MGI SNP Detail
Alliance Variant		 Chr4:8707343 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 277 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240214227
MGI SNP Detail
Alliance Variant		 Chr4:8707373 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 307 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs580846997
MGI SNP Detail
Alliance Variant		 Chr4:8707462 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 396 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259506949
MGI SNP Detail
Alliance Variant		 Chr4:8707526 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 460 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584348149
MGI SNP Detail
Alliance Variant		 Chr4:8707549 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 483 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587555308
MGI SNP Detail
Alliance Variant		 Chr4:8707583 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 517 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C A C C C C C C C C C C C C
rs581535787
MGI SNP Detail
Alliance Variant		 Chr4:8707589 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 523 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222214890
MGI SNP Detail
Alliance Variant		 Chr4:8707624 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 558 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27676092
MGI SNP Detail
Alliance Variant		 Chr4:8707634 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 568 bp distal
 SNP A/T A A A A A A A A A A A T A
rs248147447
MGI SNP Detail
Alliance Variant		 Chr4:8707658 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 592 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218679136
MGI SNP Detail
Alliance Variant		 Chr4:8707743 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 677 bp distal
Rr588568 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240700155
MGI SNP Detail
Alliance Variant		 Chr4:8707759 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 693 bp distal
Rr588568 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259767877
MGI SNP Detail
Alliance Variant		 Chr4:8707829 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 763 bp distal
Rr588568 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223964383
MGI SNP Detail
Alliance Variant		 Chr4:8707846 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 780 bp distal
Rr588568 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248690949
MGI SNP Detail
Alliance Variant		 Chr4:8707859 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 793 bp distal
Rr588568 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262185329
MGI SNP Detail
Alliance Variant		 Chr4:8707945 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 879 bp distal
Rr588568 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243251177
MGI SNP Detail
Alliance Variant		 Chr4:8708002 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 936 bp distal
Rr588568 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs256363654
MGI SNP Detail
Alliance Variant		 Chr4:8708018 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 952 bp distal
Rr588568 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs225357749
MGI SNP Detail
Alliance Variant		 Chr4:8708019 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 953 bp distal
Rr588568 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs248241920
MGI SNP Detail
Alliance Variant		 Chr4:8708023 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 957 bp distal
Rr588568 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585001245
MGI SNP Detail
Alliance Variant		 Chr4:8708041 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 975 bp distal
Rr588568 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219453479
MGI SNP Detail
Alliance Variant		 Chr4:8708089 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1023 bp distal
Rr588568 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238016003
MGI SNP Detail
Alliance Variant		 Chr4:8708188 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1122 bp distal
Rr588568 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578926890
MGI SNP Detail
Alliance Variant		 Chr4:8708246 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1180 bp distal
Rr588568 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27676091
MGI SNP Detail
Alliance Variant		 Chr4:8708257 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1191 bp distal
Rr588568 within coordinates of
 SNP C/G G G G G G C G G G G G G C G
rs214080091
MGI SNP Detail
Alliance Variant		 Chr4:8708301 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1235 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232193413
MGI SNP Detail
Alliance Variant		 Chr4:8708306 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1240 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs581179996
MGI SNP Detail
Alliance Variant		 Chr4:8708327 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1261 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs584657888
MGI SNP Detail
Alliance Variant		 Chr4:8708328 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1262 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs578683916
MGI SNP Detail
Alliance Variant		 Chr4:8708329 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1263 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs581904054
MGI SNP Detail
Alliance Variant		 Chr4:8708335 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1269 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs248264311
MGI SNP Detail
Alliance Variant		 Chr4:8708390 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1324 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs218618621
MGI SNP Detail
Alliance Variant		 Chr4:8708432 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1366 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27676090
MGI SNP Detail
Alliance Variant		 Chr4:8708433 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1367 bp distal
 SNP A/G G G G G G A G G G G G G G G
rs27676089
MGI SNP Detail
Alliance Variant		 Chr4:8708500 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1434 bp distal
Rr588569 within coordinates of
 SNP C/G C C C C C G C C C C C C G C
rs224060057
MGI SNP Detail
Alliance Variant		 Chr4:8708542 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588567 1476 bp distal
Rr588569 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 113
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory