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Mouse SNP Summary
Symbol
Name
ID
Rr588593
regulatory region 588593
MGI:8050725

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223122897
MGI SNP Detail
Alliance Variant
Chr4:8785902 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1985 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239484278
MGI SNP Detail
Alliance Variant
Chr4:8785931 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1956 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs27707899
MGI SNP Detail
Alliance Variant
Chr4:8785939 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1948 bp proximal
SNP C/T C C C C C C C C C C C C T C
rs27707898
MGI SNP Detail
Alliance Variant
Chr4:8786019 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1868 bp proximal
SNP C/T C C C C C C C C C C C C T C
rs251693408
MGI SNP Detail
Alliance Variant
Chr4:8786021 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1866 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264659327
MGI SNP Detail
Alliance Variant
Chr4:8786083 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1804 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228895269
MGI SNP Detail
Alliance Variant
Chr4:8786102 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1785 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27707897
MGI SNP Detail
Alliance Variant
Chr4:8786136 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1751 bp proximal
SNP C/T T T T T T C T T T T T T T T
rs217371009
MGI SNP Detail
Alliance Variant
Chr4:8786163 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1724 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27707896
MGI SNP Detail
Alliance Variant
Chr4:8786208 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1679 bp proximal
SNP A/G A A A A A G A A A A A A A A
rs27707895
MGI SNP Detail
Alliance Variant
Chr4:8786226 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1661 bp proximal
SNP A/C A A A A A C A A A A A A A A
rs213661270
MGI SNP Detail
Alliance Variant
Chr4:8786234 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1653 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238766507
MGI SNP Detail
Alliance Variant
Chr4:8786275 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1612 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255284602
MGI SNP Detail
Alliance Variant
Chr4:8786330 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1557 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220636531
MGI SNP Detail
Alliance Variant
Chr4:8786395 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1492 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233983594
MGI SNP Detail
Alliance Variant
Chr4:8786416 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1471 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs252967165
MGI SNP Detail
Alliance Variant
Chr4:8786419 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1468 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585328796
MGI SNP Detail
Alliance Variant
Chr4:8786458 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1429 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223087464
MGI SNP Detail
Alliance Variant
Chr4:8786475 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1412 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239644162
MGI SNP Detail
Alliance Variant
Chr4:8786481 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1406 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258353579
MGI SNP Detail
Alliance Variant
Chr4:8786486 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1401 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222839245
MGI SNP Detail
Alliance Variant
Chr4:8786505 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1382 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27707894
MGI SNP Detail
Alliance Variant
Chr4:8786540 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1347 bp proximal
SNP G/T G G G G G G G G G G G G T G
rs27707893
MGI SNP Detail
Alliance Variant
Chr4:8786570 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1317 bp proximal
SNP A/T T T T T T A T T T T T T A T
rs229493212
MGI SNP Detail
Alliance Variant
Chr4:8786729 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1158 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27707892
MGI SNP Detail
Alliance Variant
Chr4:8786744 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1143 bp proximal
SNP C/T C C C C C C C C C C C C C T
rs261362786
MGI SNP Detail
Alliance Variant
Chr4:8786821 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1066 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs27707891
MGI SNP Detail
Alliance Variant
Chr4:8786824 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1063 bp proximal
SNP C/T T T T T T C T T T T T T
rs247229360
MGI SNP Detail
Alliance Variant
Chr4:8786832 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1055 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213991859
MGI SNP Detail
Alliance Variant
Chr4:8786833 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1054 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236890416
MGI SNP Detail
Alliance Variant
Chr4:8786837 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1050 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs252433379
MGI SNP Detail
Alliance Variant
Chr4:8786843 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1044 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212579315
MGI SNP Detail
Alliance Variant
Chr4:8786870 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 1017 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579346957
MGI SNP Detail
Alliance Variant
Chr4:8786892 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 995 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234126656
MGI SNP Detail
Alliance Variant
Chr4:8787000 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 887 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252943660
MGI SNP Detail
Alliance Variant
Chr4:8787074 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 813 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27707890
MGI SNP Detail
Alliance Variant
Chr4:8787116 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 771 bp proximal
SNP C/T C C C C C C C C C C C T C
rs27707889
MGI SNP Detail
Alliance Variant
Chr4:8787128 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 759 bp proximal
SNP A/T T T T T T A T T A T T T T T
rs259861112
MGI SNP Detail
Alliance Variant
Chr4:8787197 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 690 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222423301
MGI SNP Detail
Alliance Variant
Chr4:8787215 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 672 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs244438663
MGI SNP Detail
Alliance Variant
Chr4:8787216 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 671 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs261136047
MGI SNP Detail
Alliance Variant
Chr4:8787259 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 628 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G A G G G G G G G G G G A G G G G G G G A G G G A
rs219018641
MGI SNP Detail
Alliance Variant
Chr4:8787310 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 577 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242206266
MGI SNP Detail
Alliance Variant
Chr4:8787346 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 541 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261294983
MGI SNP Detail
Alliance Variant
Chr4:8787353 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 534 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27707888
MGI SNP Detail
Alliance Variant
Chr4:8787377 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 510 bp proximal
SNP A/G A A A A A G A A A A A A G A
rs27707887
MGI SNP Detail
Alliance Variant
Chr4:8787412 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 475 bp proximal
SNP C/T T T T T T C T T T T T T C T
rs262349562
MGI SNP Detail
Alliance Variant
Chr4:8787425 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 462 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231179662
MGI SNP Detail
Alliance Variant
Chr4:8787433 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 454 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27707886
MGI SNP Detail
Alliance Variant
Chr4:8787444 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 443 bp proximal
SNP C/G G G G G G C G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27707885
MGI SNP Detail
Alliance Variant
Chr4:8787484 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 403 bp proximal
SNP C/T C C C C C T C C C C C C C C
rs228054490
MGI SNP Detail
Alliance Variant
Chr4:8787490 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 397 bp proximal
SNP C/G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T G T T T T
rs27707884
MGI SNP Detail
Alliance Variant
Chr4:8787550 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 337 bp proximal
SNP C/T C C C C C C C C C C C T C
rs27707883
MGI SNP Detail
Alliance Variant
Chr4:8787592 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 295 bp proximal
Rr719 within coordinates of
SNP C/G C C C G
rs27707882
MGI SNP Detail
Alliance Variant
Chr4:8787595 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 292 bp proximal
Rr719 within coordinates of
SNP C/T T T T T T C C T T T T T T C T
rs586331481
MGI SNP Detail
Alliance Variant
Chr4:8787629 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 258 bp proximal
Rr719 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs580352162
MGI SNP Detail
Alliance Variant
Chr4:8787634 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 253 bp proximal
Rr719 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261847741
MGI SNP Detail
Alliance Variant
Chr4:8787672 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 215 bp proximal
Rr719 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214238619
MGI SNP Detail
Alliance Variant
Chr4:8787684 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 203 bp proximal
Rr719 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27707881
MGI SNP Detail
Alliance Variant
Chr4:8787750 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 137 bp proximal
Rr719 within coordinates of
SNP G/T T T T T T G T T T T T T G T
rs255746970
MGI SNP Detail
Alliance Variant
Chr4:8787767 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 120 bp proximal
Rr719 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27707880
MGI SNP Detail
Alliance Variant
Chr4:8787828 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 59 bp proximal
Rr719 within coordinates of
SNP G/T G G G G G T G G G G G G G G
rs242121930
MGI SNP Detail
Alliance Variant
Chr4:8787830 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 57 bp proximal
Rr719 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27707879
MGI SNP Detail
Alliance Variant
Chr4:8787841 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 46 bp proximal
Rr719 within coordinates of
SNP C/G C C C C C G C C C C C C C C
rs221194019
MGI SNP Detail
Alliance Variant
Chr4:8787849 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 38 bp proximal
Rr719 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246482642
MGI SNP Detail
Alliance Variant
Chr4:8787862 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 25 bp proximal
Rr719 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265105055
MGI SNP Detail
Alliance Variant
Chr4:8787871 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 16 bp proximal
Rr719 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230867614
MGI SNP Detail
Alliance Variant
Chr4:8787884 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 3 bp proximal
Rr719 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27707878
MGI SNP Detail
Alliance Variant
Chr4:8787887 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 within coordinates of
Rr719 within coordinates of
SNP C/T C C C C C C C C C C C T C
rs261857004
MGI SNP Detail
Alliance Variant
Chr4:8787892 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 within coordinates of
Rr719 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228277439
MGI SNP Detail
Alliance Variant
Chr4:8787985 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 within coordinates of
Rr719 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27707877
MGI SNP Detail
Alliance Variant
Chr4:8787992 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 within coordinates of
Rr719 within coordinates of
SNP A/C C C C C C C A C C C C C C C C
rs583735246
MGI SNP Detail
Alliance Variant
Chr4:8788310 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 within coordinates of
Rr719 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214960895
MGI SNP Detail
Alliance Variant
Chr4:8788477 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 85 bp distal
Rr719 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227385091
MGI SNP Detail
Alliance Variant
Chr4:8788506 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 114 bp distal
Rr719 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250370025
MGI SNP Detail
Alliance Variant
Chr4:8788553 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 161 bp distal
Rr719 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214803240
MGI SNP Detail
Alliance Variant
Chr4:8788554 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 162 bp distal
Rr719 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237348641
MGI SNP Detail
Alliance Variant
Chr4:8788616 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 224 bp distal
Rr719 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27707876
MGI SNP Detail
Alliance Variant
Chr4:8788687 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 295 bp distal
Rr719 within coordinates of
SNP G/T G G G G G T G G G G G G T G
rs585429545
MGI SNP Detail
Alliance Variant
Chr4:8788711 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 319 bp distal
Rr719 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27707875
MGI SNP Detail
Alliance Variant
Chr4:8788717 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 325 bp distal
Rr719 within coordinates of
SNP G/T G G G G G T G G G G G G G G
rs213121980
MGI SNP Detail
Alliance Variant
Chr4:8788738 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 346 bp distal
Rr719 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27707874
MGI SNP Detail
Alliance Variant
Chr4:8788739 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 347 bp distal
Rr719 within coordinates of
SNP A/G A A A A A G A A A A A A A
rs27707873
MGI SNP Detail
Alliance Variant
Chr4:8788744 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 352 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP C/G C C C C C C C C C C C G C
rs221162969
MGI SNP Detail
Alliance Variant
Chr4:8788747 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 355 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27707872
MGI SNP Detail
Alliance Variant
Chr4:8788760 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 368 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/G G G G G G A G G G G G G G
rs257115621
MGI SNP Detail
Alliance Variant
Chr4:8788774 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 382 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223224031
MGI SNP Detail
Alliance Variant
Chr4:8788800 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 408 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs27707871
MGI SNP Detail
Alliance Variant
Chr4:8788804 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 412 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/G G G G G G A G G G G G G A G
rs254617148
MGI SNP Detail
Alliance Variant
Chr4:8788811 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 419 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27707870
MGI SNP Detail
Alliance Variant
Chr4:8788828 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 436 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/G G G G G G A G G G G G G A G
rs241416748
MGI SNP Detail
Alliance Variant
Chr4:8788836 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 444 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs257135122
MGI SNP Detail
Alliance Variant
Chr4:8788843 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 451 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs232164308
MGI SNP Detail
Alliance Variant
Chr4:8788844 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 452 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254969657
MGI SNP Detail
Alliance Variant
Chr4:8788882 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 490 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs262589578
MGI SNP Detail
Alliance Variant
Chr4:8788898 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 506 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227758852
MGI SNP Detail
Alliance Variant
Chr4:8788928 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 536 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs582964993
MGI SNP Detail
Alliance Variant
Chr4:8788961 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 569 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27707869
MGI SNP Detail
Alliance Variant
Chr4:8789084 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 692 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP A/T T T T T T A T T T T T T A T
rs213229751
MGI SNP Detail
Alliance Variant
Chr4:8789092 Chd7 Intron
Chd7 Noncoding-Transcript-Variant
Rr588593 700 bp distal
Rr588594 within coordinates of
Rr719 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 100 of 136

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory