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Mouse SNP Summary
Symbol
Name
ID
Rr588684
regulatory region 588684
MGI:8050816

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219525059
MGI SNP Detail
Alliance Variant
Chr4:9267331 Clvs1 Intron
Rr588684 1997 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240131045
MGI SNP Detail
Alliance Variant
Chr4:9267381 Clvs1 Intron
Rr588684 1947 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253262922
MGI SNP Detail
Alliance Variant
Chr4:9267411 Clvs1 Intron
Rr588684 1917 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G A G A G G G G G G G A G G G G
rs214259930
MGI SNP Detail
Alliance Variant
Chr4:9267448 Clvs1 Intron
Rr588684 1880 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232922944
MGI SNP Detail
Alliance Variant
Chr4:9267485 Clvs1 Intron
Rr588684 1843 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249614489
MGI SNP Detail
Alliance Variant
Chr4:9267512 Clvs1 Intron
Rr588684 1816 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218843204
MGI SNP Detail
Alliance Variant
Chr4:9267543 Clvs1 Intron
Rr588684 1785 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T C T T T T T T T T T T T
rs235464477
MGI SNP Detail
Alliance Variant
Chr4:9267582 Clvs1 Intron
Rr588684 1746 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27708249
MGI SNP Detail
Alliance Variant
Chr4:9267602 Clvs1 Intron
Rr588684 1726 bp proximal
SNP A/G G G G G G A G G G G G G G
rs223992765
MGI SNP Detail
Alliance Variant
Chr4:9267639 Clvs1 Intron
Rr588684 1689 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A T A T A A A A A A A A A A A A
rs248602163
MGI SNP Detail
Alliance Variant
Chr4:9267645 Clvs1 Intron
Rr588684 1683 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C T C T C C C C C C C T C C C C
rs27708248
MGI SNP Detail
Alliance Variant
Chr4:9267656 Clvs1 Intron
Rr588684 1672 bp proximal
SNP C/T T T T T C T T T
rs219811081
MGI SNP Detail
Alliance Variant
Chr4:9267733 Clvs1 Intron
Rr588684 1595 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235572987
MGI SNP Detail
Alliance Variant
Chr4:9267840 Clvs1 Intron
Rr588684 1488 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254277668
MGI SNP Detail
Alliance Variant
Chr4:9267923 Clvs1 Intron
Rr588684 1405 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224806250
MGI SNP Detail
Alliance Variant
Chr4:9267930 Clvs1 Intron
Rr588684 1398 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T C T T T T T T T T T T T T
rs27708247
MGI SNP Detail
Alliance Variant
Chr4:9267950 Clvs1 Intron
Rr588684 1378 bp proximal
SNP A/G A A A A A G A A A A A A
rs266207796
MGI SNP Detail
Alliance Variant
Chr4:9268017 Clvs1 Intron
Rr588684 1311 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231826840
MGI SNP Detail
Alliance Variant
Chr4:9268032 Clvs1 Intron
Rr588684 1296 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258518870
MGI SNP Detail
Alliance Variant
Chr4:9268047 Clvs1 Intron
Rr588684 1281 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6242184
MGI SNP Detail
Alliance Variant
Chr4:9268063 Clvs1 Intron
Rr588684 1265 bp proximal
SNP A/G A G
rs6242196
MGI SNP Detail
Alliance Variant
Chr4:9268072 Clvs1 Intron
Rr588684 1256 bp proximal
SNP C/G G C
rs6242199
MGI SNP Detail
Alliance Variant
Chr4:9268073 Clvs1 Intron
Rr588684 1255 bp proximal
SNP A/C C A
rs212857980
MGI SNP Detail
Alliance Variant
Chr4:9268096 Clvs1 Intron
Rr588684 1232 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs6242266
MGI SNP Detail
Alliance Variant
Chr4:9268103 Clvs1 Intron
Rr588684 1225 bp proximal
SNP C/T T T T T T T C C T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs6242769
MGI SNP Detail
Alliance Variant
Chr4:9268179 Clvs1 Intron
Rr588684 1149 bp proximal
SNP A/G G A
rs6243272
MGI SNP Detail
Alliance Variant
Chr4:9268281 Clvs1 Intron
Rr588684 1047 bp proximal
SNP A/G G G G G G G A A G G G G G G G
rs6243304
MGI SNP Detail
Alliance Variant
Chr4:9268301 Clvs1 Intron
Rr588684 1027 bp proximal
SNP C/T T C
rs261900663
MGI SNP Detail
Alliance Variant
Chr4:9268304 Clvs1 Intron
Rr588684 1024 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6243308
MGI SNP Detail
Alliance Variant
Chr4:9268307 Clvs1 Intron
Rr588684 1021 bp proximal
SNP C/T T T T T T T C C T T T T T T T
rs6243727
MGI SNP Detail
Alliance Variant
Chr4:9268329 Clvs1 Intron
Rr588684 999 bp proximal
SNP G/T T T T T T T G G T T T T T T G
rs6243780
MGI SNP Detail
Alliance Variant
Chr4:9268363 Clvs1 Intron
Rr588684 965 bp proximal
SNP C/T T C
rs6243832
MGI SNP Detail
Alliance Variant
Chr4:9268397 Clvs1 Intron
Rr588684 931 bp proximal
SNP A/G G G G G G G A A G G G G G G G
rs250583913
MGI SNP Detail
Alliance Variant
Chr4:9268470 Clvs1 Intron
Rr588684 858 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs6244935
MGI SNP Detail
Alliance Variant
Chr4:9268548 Clvs1 Intron
Rr588684 780 bp proximal
SNP A/G A A A A A A G G A A A A A A A
rs6257820
MGI SNP Detail
Alliance Variant
Chr4:9268662 Clvs1 Intron
Rr588684 666 bp proximal
SNP C/T C T
rs27708246
MGI SNP Detail
Alliance Variant
Chr4:9268742 Clvs1 Intron
Rr588684 586 bp proximal
SNP A/G G G G G G A G G G G G G G
rs257753295
MGI SNP Detail
Alliance Variant
Chr4:9268861 Clvs1 Intron
Rr588684 467 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27708245
MGI SNP Detail
Alliance Variant
Chr4:9269008 Clvs1 Intron
Rr588684 320 bp proximal
SNP C/T C C C C C T C C C C C C C
rs243600906
MGI SNP Detail
Alliance Variant
Chr4:9269013 Clvs1 Intron
Rr588684 315 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212920735
MGI SNP Detail
Alliance Variant
Chr4:9269045 Clvs1 Intron
Rr588684 283 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228539288
MGI SNP Detail
Alliance Variant
Chr4:9269080 Clvs1 Intron
Rr588683 within coordinates of
Rr588684 248 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A G A G A A A A A A A A A A A A
rs260202375
MGI SNP Detail
Alliance Variant
Chr4:9269184 Clvs1 Intron
Rr588683 within coordinates of
Rr588684 144 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215673459
MGI SNP Detail
Alliance Variant
Chr4:9269189 Clvs1 Intron
Rr588683 within coordinates of
Rr588684 139 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G A G G G G G G G A G G G G
rs240927869
MGI SNP Detail
Alliance Variant
Chr4:9269201 Clvs1 Intron
Rr588683 within coordinates of
Rr588684 127 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256951307
MGI SNP Detail
Alliance Variant
Chr4:9269214 Clvs1 Intron
Rr588683 within coordinates of
Rr588684 114 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T C T T T T T T T T T T T T
rs214189553
MGI SNP Detail
Alliance Variant
Chr4:9269381 Clvs1 Intron
Clvs1 mRNA-UTR
Clvs1 Noncoding-Transcript-Variant
Cpgi14015 within coordinates of
Rr588684 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T C T T T T T T T T T T T T
rs229698925
MGI SNP Detail
Alliance Variant
Chr4:9269388 Clvs1 Intron
Clvs1 mRNA-UTR
Clvs1 Noncoding-Transcript-Variant
Clvs1 Splice-Site
Cpgi14015 within coordinates of
Rr588684 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G A G G G G G G G A G G G G
rs248634410
MGI SNP Detail
Alliance Variant
Chr4:9269393 Clvs1 Intron
Clvs1 mRNA-UTR
Clvs1 Noncoding-Transcript-Variant
Clvs1 Splice-Site
Cpgi14015 within coordinates of
Rr588684 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G A G G G G G G G G G G G G
rs221773904
MGI SNP Detail
Alliance Variant
Chr4:9269459 Clvs1 Intron
Clvs1 mRNA-UTR
Clvs1 Noncoding-Transcript-Variant
Cpgi14015 within coordinates of
Rr588684 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A C A C A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239959111
MGI SNP Detail
Alliance Variant
Chr4:9269503 Clvs1 Intron
Clvs1 mRNA-UTR
Clvs1 Noncoding-Transcript-Variant
Clvs1 Splice-Site
Cpgi14015 within coordinates of
Rr588684 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C T C T C C C C C C C C C C C C
rs27708244
MGI SNP Detail
Alliance Variant
Chr4:9269726 Clvs1 Coding-Synonymous
Clvs1 Intron
Clvs1 mRNA-UTR
Clvs1 Noncoding-Transcript-Variant
Cpgi14015 within coordinates of
Rr588684 within coordinates of
SNP A/T A A A A A A T A A A A A A A
rs224557634
MGI SNP Detail
Alliance Variant
Chr4:9269801 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Cpgi14015 within coordinates of
Rr588684 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G A G A G G G G G G G G G G G G
rs27708243
MGI SNP Detail
Alliance Variant
Chr4:9269871 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP C/T C C C C C T C C C C C C C
rs257765664
MGI SNP Detail
Alliance Variant
Chr4:9269879 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220470901
MGI SNP Detail
Alliance Variant
Chr4:9269890 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T G T G T T T T T T T G T T T T
rs237339773
MGI SNP Detail
Alliance Variant
Chr4:9270057 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580668031
MGI SNP Detail
Alliance Variant
Chr4:9270211 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs256927112
MGI SNP Detail
Alliance Variant
Chr4:9270464 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234194136
MGI SNP Detail
Alliance Variant
Chr4:9270646 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A G A G A A A A A A A A A A A A
rs254771380
MGI SNP Detail
Alliance Variant
Chr4:9270694 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T G T G T T T T T T T T T T T T
rs265507828
MGI SNP Detail
Alliance Variant
Chr4:9270698 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T C T C T T T T T T T C T T T T
rs232312353
MGI SNP Detail
Alliance Variant
Chr4:9270701 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255088065
MGI SNP Detail
Alliance Variant
Chr4:9270706 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214249426
MGI SNP Detail
Alliance Variant
Chr4:9270714 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229852535
MGI SNP Detail
Alliance Variant
Chr4:9270729 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 3 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242887334
MGI SNP Detail
Alliance Variant
Chr4:9270808 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 82 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C G C G C C C C C C C C C C C C
rs27708242
MGI SNP Detail
Alliance Variant
Chr4:9270809 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 83 bp distal
SNP A/G G G G G G A G G G G G G G
rs242714481
MGI SNP Detail
Alliance Variant
Chr4:9270842 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 116 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27708241
MGI SNP Detail
Alliance Variant
Chr4:9270898 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 172 bp distal
SNP C/T C C C C C T C C C C C C
rs224665423
MGI SNP Detail
Alliance Variant
Chr4:9270984 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 258 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239034916
MGI SNP Detail
Alliance Variant
Chr4:9271025 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 299 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27708240
MGI SNP Detail
Alliance Variant
Chr4:9271083 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 357 bp distal
SNP C/G C C C C C C C C C C C C G
rs27708239
MGI SNP Detail
Alliance Variant
Chr4:9271105 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 379 bp distal
SNP A/G A A A A A G A A A A A A
rs237496440
MGI SNP Detail
Alliance Variant
Chr4:9271123 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 397 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256984640
MGI SNP Detail
Alliance Variant
Chr4:9271197 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 471 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27708238
MGI SNP Detail
Alliance Variant
Chr4:9271215 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 489 bp distal
SNP A/G A A A A A G A A A A A A
rs27708237
MGI SNP Detail
Alliance Variant
Chr4:9271313 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 587 bp distal
SNP C/T C C C C C T C C C C C C C
rs586191411
MGI SNP Detail
Alliance Variant
Chr4:9271358 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 632 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs580271918
MGI SNP Detail
Alliance Variant
Chr4:9271369 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 643 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs583397533
MGI SNP Detail
Alliance Variant
Chr4:9271375 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 649 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs263192901
MGI SNP Detail
Alliance Variant
Chr4:9271481 Clvs1 Intron
Clvs1 mRNA-UTR
Clvs1 Noncoding-Transcript-Variant
Rr588684 755 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233092347
MGI SNP Detail
Alliance Variant
Chr4:9271561 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 835 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32493845
MGI SNP Detail
Alliance Variant
Chr4:9271590 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 864 bp distal
SNP A/G A G G A G
rs256254150
MGI SNP Detail
Alliance Variant
Chr4:9271649 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 923 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223435499
MGI SNP Detail
Alliance Variant
Chr4:9271702 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 976 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs242950786
MGI SNP Detail
Alliance Variant
Chr4:9271826 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1100 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs32888233
MGI SNP Detail
Alliance Variant
Chr4:9271843 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1117 bp distal
SNP C/T C T T C C T
rs240035859
MGI SNP Detail
Alliance Variant
Chr4:9271884 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1158 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C A C A C C C C C C C C C C C C
rs256876771
MGI SNP Detail
Alliance Variant
Chr4:9271899 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1173 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27708236
MGI SNP Detail
Alliance Variant
Chr4:9271968 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1242 bp distal
SNP A/G G G G G G A G G G G G G G
rs27708235
MGI SNP Detail
Alliance Variant
Chr4:9272017 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1291 bp distal
SNP A/T T T T T T A T T T T T T T
rs237629285
MGI SNP Detail
Alliance Variant
Chr4:9272049 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1323 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C T C T C C C C C C C C C C C C
rs27708234
MGI SNP Detail
Alliance Variant
Chr4:9272051 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1325 bp distal
SNP C/T C C C C C T C C C C C C C
rs214757914
MGI SNP Detail
Alliance Variant
Chr4:9272082 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1356 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230163828
MGI SNP Detail
Alliance Variant
Chr4:9272119 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1393 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T C T C T T T T T T T C T T T T
rs250673222
MGI SNP Detail
Alliance Variant
Chr4:9272303 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1577 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225074218
MGI SNP Detail
Alliance Variant
Chr4:9272364 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1638 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237652986
MGI SNP Detail
Alliance Variant
Chr4:9272404 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1678 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27708233
MGI SNP Detail
Alliance Variant
Chr4:9272540 Clvs1 Intron
Clvs1 Noncoding-Transcript-Variant
Rr588684 1814 bp distal
SNP C/T T T C T T T C T T T C T T C T C T
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Showing SNP(s) 1 - 100 of 105

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory