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Mouse SNP Summary
Symbol
Name
ID 		Rr591971
regulatory region 591971
MGI:8054103

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221093039
MGI SNP Detail
Alliance Variant		 Chr4:48401275 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1998 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C T T C C C C C C C C C C C C C C C C C C C
rs47231590
MGI SNP Detail
Alliance Variant		 Chr4:48401278 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1995 bp proximal
 SNP A/G A A G
rs250372775
MGI SNP Detail
Alliance Variant		 Chr4:48401299 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1974 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48341769
MGI SNP Detail
Alliance Variant		 Chr4:48401307 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1966 bp proximal
 SNP A/T T T T A
rs239892549
MGI SNP Detail
Alliance Variant		 Chr4:48401315 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1958 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs51620859
MGI SNP Detail
Alliance Variant		 Chr4:48401342 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1931 bp proximal
 SNP A/G A G
rs231795232
MGI SNP Detail
Alliance Variant		 Chr4:48401357 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1916 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251510059
MGI SNP Detail
Alliance Variant		 Chr4:48401358 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1915 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264041028
MGI SNP Detail
Alliance Variant		 Chr4:48401399 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1874 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225352284
MGI SNP Detail
Alliance Variant		 Chr4:48401433 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1840 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243833851
MGI SNP Detail
Alliance Variant		 Chr4:48401462 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1811 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214669241
MGI SNP Detail
Alliance Variant		 Chr4:48401475 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1798 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226092882
MGI SNP Detail
Alliance Variant		 Chr4:48401579 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1694 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C G C
rs253420514
MGI SNP Detail
Alliance Variant		 Chr4:48401623 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1650 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27841237
MGI SNP Detail
Alliance Variant		 Chr4:48401693 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1580 bp proximal
 SNP C/T C C C C C T C C C T C C C C
rs585810455
MGI SNP Detail
Alliance Variant		 Chr4:48401709 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1564 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579955024
MGI SNP Detail
Alliance Variant		 Chr4:48401784 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1489 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240064163
MGI SNP Detail
Alliance Variant		 Chr4:48401804 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1469 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs263635861
MGI SNP Detail
Alliance Variant		 Chr4:48401871 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1402 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212513348
MGI SNP Detail
Alliance Variant		 Chr4:48401904 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1369 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581944172
MGI SNP Detail
Alliance Variant		 Chr4:48401924 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1349 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46232590
MGI SNP Detail
Alliance Variant		 Chr4:48401950 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1323 bp proximal
 SNP C/T C C T T T T T T C T T T T T T T T T C T T C T T T T C C C T C C C T T T T C T C T T T T T T T C T T C C
rs250497187
MGI SNP Detail
Alliance Variant		 Chr4:48401977 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1296 bp proximal
 SNP C/T C C C C C C C C T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C T C
rs32371956
MGI SNP Detail
Alliance Variant		 Chr4:48401998 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1275 bp proximal
 SNP A/G G A A A
rs233491190
MGI SNP Detail
Alliance Variant		 Chr4:48402001 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1272 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258511150
MGI SNP Detail
Alliance Variant		 Chr4:48402043 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1230 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224440361
MGI SNP Detail
Alliance Variant		 Chr4:48402049 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1224 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248488576
MGI SNP Detail
Alliance Variant		 Chr4:48402064 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1209 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32847554
MGI SNP Detail
Alliance Variant		 Chr4:48402091 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1182 bp proximal
 SNP A/G G A A A
rs585553676
MGI SNP Detail
Alliance Variant		 Chr4:48402142 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1131 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218892752
MGI SNP Detail
Alliance Variant		 Chr4:48402216 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1057 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237254272
MGI SNP Detail
Alliance Variant		 Chr4:48402220 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1053 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258738187
MGI SNP Detail
Alliance Variant		 Chr4:48402235 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1038 bp proximal
 SNP C/T T T T T T T T T T C T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T C T
rs226126304
MGI SNP Detail
Alliance Variant		 Chr4:48402248 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1025 bp proximal
 SNP A/G A A A A A A A A A G A A A A A A A A A A A A A A A A A A G G A A A A A A A A A A A A A A A A A A A A A G A
rs258648675
MGI SNP Detail
Alliance Variant		 Chr4:48402260 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1013 bp proximal
 SNP G/T T T T T T T T T T G T T T T T T T T T T T T T T T T T T G G T T T T T T T T T T T T T T T T T T T T T G T
rs32219626
MGI SNP Detail
Alliance Variant		 Chr4:48402276 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 997 bp proximal
 SNP A/G A G G G
rs234724542
MGI SNP Detail
Alliance Variant		 Chr4:48402278 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 995 bp proximal
 SNP C/T T T T T T T T T T C T T T T T T T T T T T T T T T T T T C C T T T T T T T T T T T T T T T T T T T T T C T
rs253687241
MGI SNP Detail
Alliance Variant		 Chr4:48402297 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 976 bp proximal
 SNP G/T G G G G G G G G G T G G G G G G G G G T G G G G G G G T T T G G T T G G G G G G G G G G G G G G T G G T G
rs212656178
MGI SNP Detail
Alliance Variant		 Chr4:48402313 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 960 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229697304
MGI SNP Detail
Alliance Variant		 Chr4:48402318 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 955 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244256724
MGI SNP Detail
Alliance Variant		 Chr4:48402320 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 953 bp proximal
 SNP A/G A A A A A A A A A G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A G A
rs213656375
MGI SNP Detail
Alliance Variant		 Chr4:48402488 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 785 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238628195
MGI SNP Detail
Alliance Variant		 Chr4:48402544 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 729 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262843050
MGI SNP Detail
Alliance Variant		 Chr4:48402582 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 691 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226504302
MGI SNP Detail
Alliance Variant		 Chr4:48402632 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 641 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243270800
MGI SNP Detail
Alliance Variant		 Chr4:48402661 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 612 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254642255
MGI SNP Detail
Alliance Variant		 Chr4:48402681 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 592 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G A A G G G G G G G G G G G G G G G G G G G
rs219018748
MGI SNP Detail
Alliance Variant		 Chr4:48402689 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 584 bp proximal
 SNP A/G A A A A A A A A A G A A A A A A A A A G A A A A A A A G G A A A G G A A A A A A A A A A A A A A G A A G A
rs237292410
MGI SNP Detail
Alliance Variant		 Chr4:48402704 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 569 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C T T C C C C C C C C C C C C C C C C C C C
rs27841236
MGI SNP Detail
Alliance Variant		 Chr4:48402711 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 562 bp proximal
 SNP C/G C C C C C C G C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27841235
MGI SNP Detail
Alliance Variant		 Chr4:48402774 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 499 bp proximal
 SNP A/T T T T T A T T T A T T
rs27841234
MGI SNP Detail
Alliance Variant		 Chr4:48402781 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 492 bp proximal
 SNP C/T C C C C C C C C C C T C
rs27841233
MGI SNP Detail
Alliance Variant		 Chr4:48402787 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 486 bp proximal
 SNP C/T T T T T T T T T C T T T C
rs27841232
MGI SNP Detail
Alliance Variant		 Chr4:48402799 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 474 bp proximal
 SNP C/T C C C C C T C C T T C T T T
rs259500348
MGI SNP Detail
Alliance Variant		 Chr4:48402812 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 461 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254458369
MGI SNP Detail
Alliance Variant		 Chr4:48402862 Gm68641 within coordinates of
Invs Coding-Synonymous
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 411 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223279092
MGI SNP Detail
Alliance Variant		 Chr4:48402947 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Invs Splice-Site
Rr591971 326 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579552387
MGI SNP Detail
Alliance Variant		 Chr4:48402988 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 285 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244289634
MGI SNP Detail
Alliance Variant		 Chr4:48403132 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591970 within coordinates of
Rr591971 141 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27841231
MGI SNP Detail
Alliance Variant		 Chr4:48403148 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591970 within coordinates of
Rr591971 125 bp proximal
 SNP C/T C C C C C C C C C T C C C C T
rs233068738
MGI SNP Detail
Alliance Variant		 Chr4:48403178 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591970 within coordinates of
Rr591971 95 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A G A A G G A A A A A A A A A A A A A A G A A A A
rs252202291
MGI SNP Detail
Alliance Variant		 Chr4:48403180 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591970 within coordinates of
Rr591971 93 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G A A G G G G G G G G G G G G G G A G G G G
rs219047735
MGI SNP Detail
Alliance Variant		 Chr4:48403255 Gm68641 within coordinates of
Invs Intron
Invs Noncoding-Transcript-Variant
Rr591970 within coordinates of
Rr591971 18 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239407925
MGI SNP Detail
Alliance Variant		 Chr4:48403296 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250281968
MGI SNP Detail
Alliance Variant		 Chr4:48403350 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213085731
MGI SNP Detail
Alliance Variant		 Chr4:48403402 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230006182
MGI SNP Detail
Alliance Variant		 Chr4:48403417 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27841230
MGI SNP Detail
Alliance Variant		 Chr4:48403436 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP A/G A A A A A A G A A G G A A A G
rs27841229
MGI SNP Detail
Alliance Variant		 Chr4:48403443 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP A/G G G G G G G G G G G G G G A G
rs249191946
MGI SNP Detail
Alliance Variant		 Chr4:48403446 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259050292
MGI SNP Detail
Alliance Variant		 Chr4:48403510 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227595050
MGI SNP Detail
Alliance Variant		 Chr4:48403538 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247854574
MGI SNP Detail
Alliance Variant		 Chr4:48403550 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP A/C/G G G G G G G G G G C G G G G G G G G G C G G G G G G G C C G G G C C G G G G G G G G G G G G G G A G G C G
rs27841228
MGI SNP Detail
Alliance Variant		 Chr4:48403551 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP C/G C C C C C C G C C C G C C C C
rs223312874
MGI SNP Detail
Alliance Variant		 Chr4:48403559 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238108885
MGI SNP Detail
Alliance Variant		 Chr4:48403561 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 within coordinates of
 SNP A/C A A A A A A A A A C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A C A
rs27841227
MGI SNP Detail
Alliance Variant		 Chr4:48403686 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 115 bp distal
 SNP C/T C C C C C C C C T C C C C T
rs232119014
MGI SNP Detail
Alliance Variant		 Chr4:48403697 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 126 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs256832060
MGI SNP Detail
Alliance Variant		 Chr4:48403783 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 212 bp distal
 SNP C/T T T T C C C C C C C C C C C C C C C C C C C T C C C C C C C C T C C C C C C T C T C C C C C C C C C C C T
rs219198175
MGI SNP Detail
Alliance Variant		 Chr4:48403834 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 263 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234027316
MGI SNP Detail
Alliance Variant		 Chr4:48403868 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 297 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244172455
MGI SNP Detail
Alliance Variant		 Chr4:48403870 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 299 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33031054
MGI SNP Detail
Alliance Variant		 Chr4:48403914 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 343 bp distal
 SNP A/G G A
rs587160883
MGI SNP Detail
Alliance Variant		 Chr4:48403954 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 383 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A G G A A A A A A A A A A A A A A G A A A A
rs583823001
MGI SNP Detail
Alliance Variant		 Chr4:48403959 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 388 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A G G A A A A A A A A A A A A A A A A A A A
rs211909415
MGI SNP Detail
Alliance Variant		 Chr4:48403962 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 391 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T G G T T T T T T T T T T T T T T G T T T T
rs230048754
MGI SNP Detail
Alliance Variant		 Chr4:48403972 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 401 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252262381
MGI SNP Detail
Alliance Variant		 Chr4:48403978 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 407 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214403731
MGI SNP Detail
Alliance Variant		 Chr4:48403979 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 408 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A G G A A A A A A A A A A A A A A G A A A A
rs238778629
MGI SNP Detail
Alliance Variant		 Chr4:48404003 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 432 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27841226
MGI SNP Detail
Alliance Variant		 Chr4:48404009 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 438 bp distal
 SNP A/G A A A A A A G A A A A
rs27841225
MGI SNP Detail
Alliance Variant		 Chr4:48404180 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 609 bp distal
 SNP C/T C C C C C C T C C C T C C C C
rs241143727
MGI SNP Detail
Alliance Variant		 Chr4:48404490 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 919 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs249166432
MGI SNP Detail
Alliance Variant		 Chr4:48404532 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 961 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218163949
MGI SNP Detail
Alliance Variant		 Chr4:48404591 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1020 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238644982
MGI SNP Detail
Alliance Variant		 Chr4:48404605 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1034 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262277775
MGI SNP Detail
Alliance Variant		 Chr4:48404632 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1061 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27841224
MGI SNP Detail
Alliance Variant		 Chr4:48404684 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1113 bp distal
 SNP A/T A A A A A T A A A T A A T A
rs244830265
MGI SNP Detail
Alliance Variant		 Chr4:48404731 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1160 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27841223
MGI SNP Detail
Alliance Variant		 Chr4:48404744 Invs Intron
Invs Noncoding-Transcript-Variant
Rr591971 1173 bp distal
 SNP C/T T T T T T C T T C C T T C
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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