Rr595849 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr595849
regulatory region 595849
MGI:8057981

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs583888259 MGI SNP Detail Alliance Variant	Chr4:99120788	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1947 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs587302087 MGI SNP Detail Alliance Variant	Chr4:99120793	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1942 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs214930227 MGI SNP Detail Alliance Variant	Chr4:99120794	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1941 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	T		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs238703621 MGI SNP Detail Alliance Variant	Chr4:99120800	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1935 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	G		A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs3666812 MGI SNP Detail Alliance Variant	Chr4:99120805	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1930 bp proximal	SNP	C/T		T		T	C	T				C						C										C	T			C							T				C		C												C
rs28075373 MGI SNP Detail Alliance Variant	Chr4:99120826	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1909 bp proximal	SNP	C/G		G			G	G		G		G			G								G					G	G			G					G		G				G		C												G
rs234686318 MGI SNP Detail Alliance Variant	Chr4:99120843	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1892 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs255236197 MGI SNP Detail Alliance Variant	Chr4:99120848	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1887 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	G		A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs222590032 MGI SNP Detail Alliance Variant	Chr4:99120856	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1879 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs28075372 MGI SNP Detail Alliance Variant	Chr4:99120909	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1826 bp proximal	SNP	A/C		A			A	A		A		A											A					A	A			A					A		A				A		C												A
rs31890774 MGI SNP Detail Alliance Variant	Chr4:99120916	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1819 bp proximal	SNP	A/G				A	G											A
rs3667902 MGI SNP Detail Alliance Variant	Chr4:99120949	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1786 bp proximal	SNP	A/T		A		A	T	A		T		T			T			T					A					A	A			A					A		A				T		T												A
rs246985523 MGI SNP Detail Alliance Variant	Chr4:99121131	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1604 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C		C	C	C	C	C	C		C	C	C	C	C		C		T	C	C	C	C
rs262420422 MGI SNP Detail Alliance Variant	Chr4:99121143	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1592 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T		T	T	C		T	T	T	T	T	T		T	T	T	T	T		T	T	C	T	T	T	T
rs229300837 MGI SNP Detail Alliance Variant	Chr4:99121233	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1502 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G		G	G	A		G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs28075371 MGI SNP Detail Alliance Variant	Chr4:99121271	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1464 bp proximal	SNP	C/T		C		C	T	C		T		T			T													C	C			C						T	C				T		T
rs260243334 MGI SNP Detail Alliance Variant	Chr4:99121284	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1451 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs228749489 MGI SNP Detail Alliance Variant	Chr4:99121311	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1424 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs246191689 MGI SNP Detail Alliance Variant	Chr4:99121328	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1407 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs28075370 MGI SNP Detail Alliance Variant	Chr4:99121380	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1355 bp proximal	SNP	C/T		T		T	C			C		C			C													T	T			T							T				C		C
rs230676708 MGI SNP Detail Alliance Variant	Chr4:99121485	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1250 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs254945702 MGI SNP Detail Alliance Variant	Chr4:99121553	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1182 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs212542198 MGI SNP Detail Alliance Variant	Chr4:99121563	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1172 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs235866348 MGI SNP Detail Alliance Variant	Chr4:99121584	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1151 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs255250127 MGI SNP Detail Alliance Variant	Chr4:99121605	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1130 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs216628013 MGI SNP Detail Alliance Variant	Chr4:99121610	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1125 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs28075369 MGI SNP Detail Alliance Variant	Chr4:99121614	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1121 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			C					T		C				C		C												C
rs28075368 MGI SNP Detail Alliance Variant	Chr4:99121682	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1053 bp proximal	SNP	A/G		G			G	G		G		G			G								A					G	G			G					A		G				G		G												G
rs222970505 MGI SNP Detail Alliance Variant	Chr4:99121702	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1033 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs244371439 MGI SNP Detail Alliance Variant	Chr4:99121721	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1014 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs28131243 MGI SNP Detail Alliance Variant	Chr4:99121732	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 1003 bp proximal	SNP	C/T		C		C	T	C		T		T			T								T					C				C					T						T		T												C
rs49977034 MGI SNP Detail Alliance Variant	Chr4:99121744	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 991 bp proximal	SNP	A/T				A	T																					A
rs28131242 MGI SNP Detail Alliance Variant	Chr4:99121749	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 986 bp proximal	SNP	C/G		C		C	G	G		G		G			G								C					C	C			C					C						G		G
rs260253660 MGI SNP Detail Alliance Variant	Chr4:99121757	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 978 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs228807743 MGI SNP Detail Alliance Variant	Chr4:99121775	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 960 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T		C	T	T	T	T
rs51288095 MGI SNP Detail Alliance Variant	Chr4:99121784	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 951 bp proximal	SNP	A/G				G	A																					G
rs28131241 MGI SNP Detail Alliance Variant	Chr4:99121832	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 903 bp proximal	SNP	A/T		A		A	T	A		T		T			T								A					A	A			A					A		A				A		A												A
rs28131240 MGI SNP Detail Alliance Variant	Chr4:99121881	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 854 bp proximal	SNP	G/T		G		G	T	G		T		T			T								G					G	G			G					G		G				T		T												G
rs28131239 MGI SNP Detail Alliance Variant	Chr4:99121902	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 833 bp proximal	SNP	C/T		C			T	C		T		T			T								C					C	C			C					C		C				T		T												C
rs212929823 MGI SNP Detail Alliance Variant	Chr4:99121933	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 802 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs28131238 MGI SNP Detail Alliance Variant	Chr4:99121961	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 774 bp proximal	SNP	C/T		C			T	C		T		T			T								C					C	C			C		C			C		C				C		T								T				C
rs28131237 MGI SNP Detail Alliance Variant	Chr4:99122061	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 674 bp proximal	SNP	C/T		C		C	C	C		C		C			C								C					C	C			C					C		C				T		T												C
rs216686727 MGI SNP Detail Alliance Variant	Chr4:99122067	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 668 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs234781490 MGI SNP Detail Alliance Variant	Chr4:99122070	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 665 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs28131236 MGI SNP Detail Alliance Variant	Chr4:99122112	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 623 bp proximal	SNP	A/C		C			A	C		A		A			A								C					C	C			C					C		C				C		C												C
rs28131235 MGI SNP Detail Alliance Variant	Chr4:99122125	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 610 bp proximal	SNP	A/G		G		G	G	G		G		G			G								G					A	G			G					G		G				G		G												G
rs237896345 MGI SNP Detail Alliance Variant	Chr4:99122146	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 589 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs28131234 MGI SNP Detail Alliance Variant	Chr4:99122155	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 580 bp proximal	SNP	C/T		C			C	C		C		C			C								C					C	C			C		C			C		C				C		T								T				C
rs28131233 MGI SNP Detail Alliance Variant	Chr4:99122200	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 535 bp proximal	SNP	A/T		T			T	T		T		T			T								A					A	T			T					A		T				T		A												T
rs28131232 MGI SNP Detail Alliance Variant	Chr4:99122245	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 490 bp proximal	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G		G				G		A												G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs28131231 MGI SNP Detail Alliance Variant	Chr4:99122273	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 462 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			C							C				C		C												C
rs253223680 MGI SNP Detail Alliance Variant	Chr4:99122326	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 409 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs51292413 MGI SNP Detail Alliance Variant	Chr4:99122340	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 395 bp proximal	SNP	C/T				C	T																					C
rs52463992 MGI SNP Detail Alliance Variant	Chr4:99122421	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 314 bp proximal	SNP	A/G				A	G																					A
rs265602769 MGI SNP Detail Alliance Variant	Chr4:99122424	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 311 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	G		T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs231173137 MGI SNP Detail Alliance Variant	Chr4:99122425	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 310 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A		A	A	A	A	A	A			A	A	A			A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A
rs246233656 MGI SNP Detail Alliance Variant	Chr4:99122491	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 244 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	G		T	T	T	T	T	T		T	T	T	T	T	T	T		T	T	T	T	T
rs261837152 MGI SNP Detail Alliance Variant	Chr4:99122548	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 187 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs223987030 MGI SNP Detail Alliance Variant	Chr4:99122549	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 186 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs248552197 MGI SNP Detail Alliance Variant	Chr4:99122552	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 183 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs260396565 MGI SNP Detail Alliance Variant	Chr4:99122560	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 175 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	C		T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs227811977 MGI SNP Detail Alliance Variant	Chr4:99122563	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 172 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs252289730 MGI SNP Detail Alliance Variant	Chr4:99122567	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 168 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs28131230 MGI SNP Detail Alliance Variant	Chr4:99122599	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 136 bp proximal	SNP	A/G		G		G	A	G		A		A			A								A					A	G			A		A			A		G				A		G								G				A
rs236100758 MGI SNP Detail Alliance Variant	Chr4:99122619	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 116 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs253948994 MGI SNP Detail Alliance Variant	Chr4:99122626	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 109 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs213090237 MGI SNP Detail Alliance Variant	Chr4:99122634	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 101 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs230176370 MGI SNP Detail Alliance Variant	Chr4:99122658	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 77 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	G		T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs253339401 MGI SNP Detail Alliance Variant	Chr4:99122662	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 73 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs222049723 MGI SNP Detail Alliance Variant	Chr4:99122691	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 44 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs48391914 MGI SNP Detail Alliance Variant	Chr4:99122694	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 41 bp proximal	SNP	A/T					T																					A
rs259019396 MGI SNP Detail Alliance Variant	Chr4:99122698	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 37 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs50723397 MGI SNP Detail Alliance Variant	Chr4:99122706	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 29 bp proximal	SNP	A/G				G	A																					A
rs243510619 MGI SNP Detail Alliance Variant	Chr4:99122708	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 27 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs264940831 MGI SNP Detail Alliance Variant	Chr4:99122718	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 17 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	C		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs218386504 MGI SNP Detail Alliance Variant	Chr4:99122731	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 4 bp proximal	SNP	C/T	T	T	T		C	T	T	C	C	C	T	C	C	T	T	T	T	T	T	T	C	C	T	C	T	T	T	T	C	T	T	T	T	C	C		T	T	T	T	T	T		C	T	T	T	T	C	T	T	C	T	T	T	T
rs242589187 MGI SNP Detail Alliance Variant	Chr4:99122732	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 3 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs260443188 MGI SNP Detail Alliance Variant	Chr4:99122752	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 within coordinates of	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	G		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs227825424 MGI SNP Detail Alliance Variant	Chr4:99122759	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 3 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs584608072 MGI SNP Detail Alliance Variant	Chr4:99122770	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 14 bp distal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs256782711 MGI SNP Detail Alliance Variant	Chr4:99122784	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 28 bp distal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	G	G	C		G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs262772767 MGI SNP Detail Alliance Variant	Chr4:99122807	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 51 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs230145687 MGI SNP Detail Alliance Variant	Chr4:99122818	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 62 bp distal	SNP	A/G	G	G	G		A	G	G	A	A	A	G		A	G	G	G	G	G	G	G	A	A	G	A	G	G	G	G	A	G	G	G	G	A	A		G	G	G	G	G	G		A	G	G	G	G	A	G	G	A	G	G	G	G
rs249847390 MGI SNP Detail Alliance Variant	Chr4:99122819	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 63 bp distal	SNP	A/C	C	C	C		A	C	C	A	A	A	C		A	C	C	C	C	C	C	C	A	A	C	A	C	C	C	C	A	C	C	C	C	A	A		C	C	C	C	C	C		A	C	C	C	C	A	C	C	C	C	C	C	C
rs211973587 MGI SNP Detail Alliance Variant	Chr4:99122820	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 64 bp distal	SNP	A/G	A	A	A		G	A	A	G	G	G	A		G	A	A	A	A	A	A	A	G	G	A	G	A	A	A	A	G	A	A	A	A	G	G		A	A	A	A	A	A		G	A	A	A	A	G	A	A	A	A	A	A	A
rs235069245 MGI SNP Detail Alliance Variant	Chr4:99122836	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 80 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs48114342 MGI SNP Detail Alliance Variant	Chr4:99122852	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 96 bp distal	SNP	C/G				G	C																					G
rs47405272 MGI SNP Detail Alliance Variant	Chr4:99122854	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 98 bp distal	SNP	A/T				A	T																					A
rs238763061 MGI SNP Detail Alliance Variant	Chr4:99122867	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 111 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs262929296 MGI SNP Detail Alliance Variant	Chr4:99122874	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 118 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs46612659 MGI SNP Detail Alliance Variant	Chr4:99122878	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 122 bp distal	SNP	G/T				T	G																					T
rs238618566 MGI SNP Detail Alliance Variant	Chr4:99122880	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 124 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs250821413 MGI SNP Detail Alliance Variant	Chr4:99122892	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 136 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	C		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs49728142 MGI SNP Detail Alliance Variant	Chr4:99122938	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 182 bp distal	SNP	C/T				T	C																					T
rs47799915 MGI SNP Detail Alliance Variant	Chr4:99122974	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 218 bp distal	SNP	A/C				C	A																					C
rs260451932 MGI SNP Detail Alliance Variant	Chr4:99122996	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 240 bp distal	SNP	C/T	C	C	C		T	C	C	T	T	T	C	T	T	C	C	C	C	C	C	C	T	T	C	T	C	C	C	C	T	C	C	C	C	T	T		C	C	C	C	C	C		T	C	C	C	C	T	C	C	T	C	C	C	C
rs221550256 MGI SNP Detail Alliance Variant	Chr4:99122997	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 241 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs244805482 MGI SNP Detail Alliance Variant	Chr4:99123012	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 256 bp distal	SNP	A/G	G	G	G		A	G	G	A	A	A	G	A	A	G	G	G	G	G	G	G	A	A	G	A	G	G	G	G	A	G	G	G	G	A	A		G	G	G	G	G	G		A	G	G	G	G	A	G	G	A	G	G	G	G
rs50819679 MGI SNP Detail Alliance Variant	Chr4:99123046	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 290 bp distal	SNP	C/T				T	C																					T
rs28131229 MGI SNP Detail Alliance Variant	Chr4:99123047	Atg4c Intron Atg4c Noncoding-Transcript-Variant Rr595849 291 bp distal	SNP	C/T		T		T	C	T		C		C			C								C					T	T			T					C		T				T		C												T

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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