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Mouse SNP Summary
Symbol
Name
ID
Rr596045
regulatory region 596045
MGI:8058177

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs28201008
MGI SNP Detail
Alliance Variant
Chr4:100745430 Cachd1 Intron
Rr596045 1951 bp proximal
SNP A/G A A A A A G A A A G A G
rs253171464
MGI SNP Detail
Alliance Variant
Chr4:100745537 Cachd1 Intron
Rr596045 1844 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216165468
MGI SNP Detail
Alliance Variant
Chr4:100745637 Cachd1 Intron
Rr596045 1744 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs236833495
MGI SNP Detail
Alliance Variant
Chr4:100745652 Cachd1 Intron
Rr596045 1729 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261948273
MGI SNP Detail
Alliance Variant
Chr4:100745658 Cachd1 Intron
Rr596045 1723 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28201007
MGI SNP Detail
Alliance Variant
Chr4:100745697 Cachd1 Intron
Rr596045 1684 bp proximal
SNP C/T C C C T C C T C T T T C C C C T
rs229774837
MGI SNP Detail
Alliance Variant
Chr4:100745723 Cachd1 Intron
Rr596045 1658 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28201006
MGI SNP Detail
Alliance Variant
Chr4:100745737 Cachd1 Intron
Rr596045 1644 bp proximal
SNP C/T C C C C C T C C C T T C T C
rs222377805
MGI SNP Detail
Alliance Variant
Chr4:100745749 Cachd1 Intron
Rr596045 1632 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28201005
MGI SNP Detail
Alliance Variant
Chr4:100745786 Cachd1 Intron
Rr596045 1595 bp proximal
SNP C/T T T T T T C T T T C T C
rs259809067
MGI SNP Detail
Alliance Variant
Chr4:100745806 Cachd1 Intron
Rr596045 1575 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224680417
MGI SNP Detail
Alliance Variant
Chr4:100745825 Cachd1 Intron
Rr596045 1556 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244411107
MGI SNP Detail
Alliance Variant
Chr4:100745917 Cachd1 Intron
Rr596045 1464 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265145903
MGI SNP Detail
Alliance Variant
Chr4:100745940 Cachd1 Intron
Rr596045 1441 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28201004
MGI SNP Detail
Alliance Variant
Chr4:100745950 Cachd1 Intron
Rr596045 1431 bp proximal
SNP A/G G G G A G G A G A A A G G G G A
rs587366126
MGI SNP Detail
Alliance Variant
Chr4:100745994 Cachd1 Intron
Rr596045 1387 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28201003
MGI SNP Detail
Alliance Variant
Chr4:100746065 Cachd1 Intron
Rr596045 1316 bp proximal
SNP A/G A A G A G G G G G A G A G G
rs259920385
MGI SNP Detail
Alliance Variant
Chr4:100746106 Cachd1 Intron
Rr596045 1275 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs228480594
MGI SNP Detail
Alliance Variant
Chr4:100746123 Cachd1 Intron
Rr596045 1258 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32627701
MGI SNP Detail
Alliance Variant
Chr4:100746230 Cachd1 Intron
Rr596045 1151 bp proximal
SNP A/T T A A
rs33023232
MGI SNP Detail
Alliance Variant
Chr4:100746288 Cachd1 Intron
Rr596045 1093 bp proximal
SNP A/G G A A G A
rs231143925
MGI SNP Detail
Alliance Variant
Chr4:100746289 Cachd1 Intron
Rr596045 1092 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250580467
MGI SNP Detail
Alliance Variant
Chr4:100746310 Cachd1 Intron
Rr596045 1071 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212783188
MGI SNP Detail
Alliance Variant
Chr4:100746383 Cachd1 Intron
Rr596045 998 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs229738064
MGI SNP Detail
Alliance Variant
Chr4:100746412 Cachd1 Intron
Rr596045 969 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32998502
MGI SNP Detail
Alliance Variant
Chr4:100746443 Cachd1 Intron
Rr596045 938 bp proximal
SNP C/T T T C C T C
rs216494342
MGI SNP Detail
Alliance Variant
Chr4:100746469 Cachd1 Intron
Rr596045 912 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238320007
MGI SNP Detail
Alliance Variant
Chr4:100746621 Cachd1 Intron
Rr596045 760 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262723707
MGI SNP Detail
Alliance Variant
Chr4:100746649 Cachd1 Intron
Rr596045 732 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224519399
MGI SNP Detail
Alliance Variant
Chr4:100746650 Cachd1 Intron
Rr596045 731 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247359901
MGI SNP Detail
Alliance Variant
Chr4:100746654 Cachd1 Intron
Rr596045 727 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249970082
MGI SNP Detail
Alliance Variant
Chr4:100746719 Cachd1 Intron
Rr596045 662 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs218933610
MGI SNP Detail
Alliance Variant
Chr4:100746733 Cachd1 Intron
Rr596045 648 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs236172493
MGI SNP Detail
Alliance Variant
Chr4:100746860 Cachd1 Intron
Rr596045 521 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28201002
MGI SNP Detail
Alliance Variant
Chr4:100746961 Cachd1 Intron
Rr596045 420 bp proximal
SNP A/G G G G G G G G G A G
rs260012292
MGI SNP Detail
Alliance Variant
Chr4:100747041 Cachd1 Intron
Rr596045 340 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28201001
MGI SNP Detail
Alliance Variant
Chr4:100747056 Cachd1 Intron
Rr596045 325 bp proximal
SNP C/T C C C C C C C C C C C T
rs246452975
MGI SNP Detail
Alliance Variant
Chr4:100747115 Cachd1 Intron
Rr596045 266 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265536082
MGI SNP Detail
Alliance Variant
Chr4:100747201 Cachd1 Intron
Rr596045 180 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs230864988
MGI SNP Detail
Alliance Variant
Chr4:100747207 Cachd1 Intron
Rr596045 174 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs255262233
MGI SNP Detail
Alliance Variant
Chr4:100747538 Cachd1 Intron
Rr596045 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28201000
MGI SNP Detail
Alliance Variant
Chr4:100747701 Cachd1 Intron
Rr596045 within coordinates of
SNP A/T T T T T T T T T T A
rs248692962
MGI SNP Detail
Alliance Variant
Chr4:100747809 Cachd1 Intron
Rr596045 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28200999
MGI SNP Detail
Alliance Variant
Chr4:100747995 Cachd1 Intron
Rr596045 within coordinates of
SNP C/T T T T T T C T T T C T C
rs240726351
MGI SNP Detail
Alliance Variant
Chr4:100748001 Cachd1 Intron
Rr596045 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs258325718
MGI SNP Detail
Alliance Variant
Chr4:100748185 Cachd1 Intron
Rr596045 56 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214809165
MGI SNP Detail
Alliance Variant
Chr4:100748225 Cachd1 Intron
Rr596045 96 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581503321
MGI SNP Detail
Alliance Variant
Chr4:100748335 Cachd1 Intron
Rr596045 206 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs584793335
MGI SNP Detail
Alliance Variant
Chr4:100748340 Cachd1 Intron
Rr596045 211 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs586663669
MGI SNP Detail
Alliance Variant
Chr4:100748358 Cachd1 Intron
Rr596045 229 bp distal
SNP A/C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237376976
MGI SNP Detail
Alliance Variant
Chr4:100748494 Cachd1 Intron
Rr596045 365 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250051270
MGI SNP Detail
Alliance Variant
Chr4:100748573 Cachd1 Intron
Rr596045 444 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs219018167
MGI SNP Detail
Alliance Variant
Chr4:100748574 Cachd1 Intron
Rr596045 445 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230202792
MGI SNP Detail
Alliance Variant
Chr4:100748690 Cachd1 Intron
Rr596045 561 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253436780
MGI SNP Detail
Alliance Variant
Chr4:100748812 Cachd1 Intron
Rr596045 683 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs28200998
MGI SNP Detail
Alliance Variant
Chr4:100748848 Cachd1 Intron
Rr596045 719 bp distal
SNP A/G G G G G G A G G G A G A
rs28200997
MGI SNP Detail
Alliance Variant
Chr4:100748878 Cachd1 Intron
Rr596045 749 bp distal
SNP G/T T T T T T G T T T G T G
rs32518674
MGI SNP Detail
Alliance Variant
Chr4:100748927 Cachd1 Intron
Rr596045 798 bp distal
SNP C/T C C T T C T
rs223257958
MGI SNP Detail
Alliance Variant
Chr4:100748973 Cachd1 Intron
Rr596045 844 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs238993286
MGI SNP Detail
Alliance Variant
Chr4:100748979 Cachd1 Intron
Rr596045 850 bp distal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs28200996
MGI SNP Detail
Alliance Variant
Chr4:100748999 Cachd1 Intron
Rr596045 870 bp distal
SNP A/G G G G G G A G G G A A G A G
rs224198879
MGI SNP Detail
Alliance Variant
Chr4:100749050 Cachd1 Intron
Rr596045 921 bp distal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252904238
MGI SNP Detail
Alliance Variant
Chr4:100749185 Cachd1 Intron
Rr596045 1056 bp distal
SNP A/G G A
rs581008654
MGI SNP Detail
Alliance Variant
Chr4:100749448 Cachd1 Intron
Rr596045 1319 bp distal
SNP A/C C A A C C C C C C C C C C C C C C C C
rs584192830
MGI SNP Detail
Alliance Variant
Chr4:100750126 Cachd1 Intron
Rr596045 1997 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 65 of 65

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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