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Mouse SNP Summary
Symbol
Name
ID 		Rr596093
regulatory region 596093
MGI:8058225

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221453187
MGI SNP Detail
Alliance Variant		 Chr4:101072215 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1966 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs237504661
MGI SNP Detail
Alliance Variant		 Chr4:101072286 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1895 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261416576
MGI SNP Detail
Alliance Variant		 Chr4:101072413 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1768 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222826048
MGI SNP Detail
Alliance Variant		 Chr4:101072414 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1767 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs28326408
MGI SNP Detail
Alliance Variant		 Chr4:101072481 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1700 bp proximal
 SNP C/T T T T T T T T T T C T T T T
rs241336802
MGI SNP Detail
Alliance Variant		 Chr4:101072486 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1695 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265512952
MGI SNP Detail
Alliance Variant		 Chr4:101072537 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1644 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28326407
MGI SNP Detail
Alliance Variant		 Chr4:101072628 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1553 bp proximal
 SNP A/T A A A A A A A A A T A A T A
rs255275133
MGI SNP Detail
Alliance Variant		 Chr4:101072699 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1482 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs28326406
MGI SNP Detail
Alliance Variant		 Chr4:101072848 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1333 bp proximal
 SNP C/T T T T T T T C T T T T
rs28326405
MGI SNP Detail
Alliance Variant		 Chr4:101072912 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1269 bp proximal
 SNP A/G A A A A A A G A A A G A A G G G
rs28326404
MGI SNP Detail
Alliance Variant		 Chr4:101072948 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1233 bp proximal
 SNP A/G A A A A A A G A A G A A G G
rs216485264
MGI SNP Detail
Alliance Variant		 Chr4:101072971 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1210 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233335788
MGI SNP Detail
Alliance Variant		 Chr4:101072992 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1189 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs251969507
MGI SNP Detail
Alliance Variant		 Chr4:101073020 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1161 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214811019
MGI SNP Detail
Alliance Variant		 Chr4:101073022 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1159 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235863740
MGI SNP Detail
Alliance Variant		 Chr4:101073026 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1155 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262230240
MGI SNP Detail
Alliance Variant		 Chr4:101073114 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1067 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213218776
MGI SNP Detail
Alliance Variant		 Chr4:101073153 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1028 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230148857
MGI SNP Detail
Alliance Variant		 Chr4:101073166 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1015 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs28326403
MGI SNP Detail
Alliance Variant		 Chr4:101073220 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 961 bp proximal
 SNP C/T T T T T T T T T T T T T T C
rs222866794
MGI SNP Detail
Alliance Variant		 Chr4:101073265 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 916 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28326402
MGI SNP Detail
Alliance Variant		 Chr4:101073290 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 891 bp proximal
 SNP A/G G G G G G G G G G G G G G G A
rs28326401
MGI SNP Detail
Alliance Variant		 Chr4:101073291 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 890 bp proximal
 SNP A/T T T T T T T A T T T T T T T
rs223257874
MGI SNP Detail
Alliance Variant		 Chr4:101073343 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 838 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243219862
MGI SNP Detail
Alliance Variant		 Chr4:101073359 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 822 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264859551
MGI SNP Detail
Alliance Variant		 Chr4:101073422 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 759 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223464263
MGI SNP Detail
Alliance Variant		 Chr4:101073441 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 740 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241448993
MGI SNP Detail
Alliance Variant		 Chr4:101073550 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 631 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs258798806
MGI SNP Detail
Alliance Variant		 Chr4:101073610 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 571 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs227443857
MGI SNP Detail
Alliance Variant		 Chr4:101073618 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 563 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs257005668
MGI SNP Detail
Alliance Variant		 Chr4:101073641 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 540 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214478921
MGI SNP Detail
Alliance Variant		 Chr4:101073656 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 525 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs28326400
MGI SNP Detail
Alliance Variant		 Chr4:101073686 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 495 bp proximal
 SNP C/G G G G G G G C G G G C G G C G
rs249540708
MGI SNP Detail
Alliance Variant		 Chr4:101073714 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 467 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213246886
MGI SNP Detail
Alliance Variant		 Chr4:101073715 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 466 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs28326399
MGI SNP Detail
Alliance Variant		 Chr4:101073767 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 414 bp proximal
 SNP A/G A A A A A A G A A A G A A G G
rs28326398
MGI SNP Detail
Alliance Variant		 Chr4:101073850 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 331 bp proximal
 SNP A/T T T T T T T T T T T A T T A T
rs216969598
MGI SNP Detail
Alliance Variant		 Chr4:101073869 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 312 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28326397
MGI SNP Detail
Alliance Variant		 Chr4:101073962 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 219 bp proximal
 SNP G/T T T T T T T G T T G T T G G
rs28326396
MGI SNP Detail
Alliance Variant		 Chr4:101074088 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 93 bp proximal
 SNP A/G A A A A A A G A A G A A G G
rs28326395
MGI SNP Detail
Alliance Variant		 Chr4:101074325 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs246069662
MGI SNP Detail
Alliance Variant		 Chr4:101074360 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248946539
MGI SNP Detail
Alliance Variant		 Chr4:101074444 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs217955182
MGI SNP Detail
Alliance Variant		 Chr4:101074496 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs241574388
MGI SNP Detail
Alliance Variant		 Chr4:101074614 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs258945527
MGI SNP Detail
Alliance Variant		 Chr4:101074644 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28326394
MGI SNP Detail
Alliance Variant		 Chr4:101074687 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP C/T C C C C T C C C C C C C C
rs245006871
MGI SNP Detail
Alliance Variant		 Chr4:101074699 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265230513
MGI SNP Detail
Alliance Variant		 Chr4:101074707 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229518846
MGI SNP Detail
Alliance Variant		 Chr4:101074785 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253596924
MGI SNP Detail
Alliance Variant		 Chr4:101074819 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255764191
MGI SNP Detail
Alliance Variant		 Chr4:101074852 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228937072
MGI SNP Detail
Alliance Variant		 Chr4:101074936 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 40 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs249215458
MGI SNP Detail
Alliance Variant		 Chr4:101074949 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 53 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217003743
MGI SNP Detail
Alliance Variant		 Chr4:101075017 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 121 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241465533
MGI SNP Detail
Alliance Variant		 Chr4:101075045 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 149 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs252531502
MGI SNP Detail
Alliance Variant		 Chr4:101075046 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 150 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215371709
MGI SNP Detail
Alliance Variant		 Chr4:101075052 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 156 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236335416
MGI SNP Detail
Alliance Variant		 Chr4:101075195 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 299 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249061755
MGI SNP Detail
Alliance Variant		 Chr4:101075233 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 337 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs218049681
MGI SNP Detail
Alliance Variant		 Chr4:101075303 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 407 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235246138
MGI SNP Detail
Alliance Variant		 Chr4:101075813 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 917 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28326393
MGI SNP Detail
Alliance Variant		 Chr4:101075894 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 998 bp distal
 SNP G/T T T T T T T T T T T G T T G T
rs224909052
MGI SNP Detail
Alliance Variant		 Chr4:101075950 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1054 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs28326392
MGI SNP Detail
Alliance Variant		 Chr4:101076212 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1316 bp distal
 SNP A/G G G G G G G A G G G G G G G G
rs262700073
MGI SNP Detail
Alliance Variant		 Chr4:101076215 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1319 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs221941275
MGI SNP Detail
Alliance Variant		 Chr4:101076247 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1351 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237868997
MGI SNP Detail
Alliance Variant		 Chr4:101076320 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1424 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs28326391
MGI SNP Detail
Alliance Variant		 Chr4:101076540 Jak1 Intron
Jak1 mRNA-UTR
Jak1 Noncoding-Transcript-Variant
Rr596093 1644 bp distal
 SNP C/G G G G G G G C G G G G G G G G
rs228972553
MGI SNP Detail
Alliance Variant		 Chr4:101076553 Jak1 Intron
Jak1 mRNA-UTR
Jak1 Noncoding-Transcript-Variant
Rr596093 1657 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs28326390
MGI SNP Detail
Alliance Variant		 Chr4:101076734 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1838 bp distal
 SNP C/T C C C C C C T C C C C C C C C
rs28326389
MGI SNP Detail
Alliance Variant		 Chr4:101076780 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1884 bp distal
 SNP A/G A A A A A A A A A G A A G A
rs215112305
MGI SNP Detail
Alliance Variant		 Chr4:101076809 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1913 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs238401816
MGI SNP Detail
Alliance Variant		 Chr4:101076827 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1931 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243278456
MGI SNP Detail
Alliance Variant		 Chr4:101076831 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596093 1935 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
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Showing SNP(s) 1 - 76 of 76
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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