About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr596105
regulatory region 596105
MGI:8058237

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 117

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264087082
MGI SNP Detail
Alliance Variant
Chr4:101119463 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1988 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233224545
MGI SNP Detail
Alliance Variant
Chr4:101119535 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1916 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs245297600
MGI SNP Detail
Alliance Variant
Chr4:101119565 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1886 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265302637
MGI SNP Detail
Alliance Variant
Chr4:101119595 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1856 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229944912
MGI SNP Detail
Alliance Variant
Chr4:101119602 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1849 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581916839
MGI SNP Detail
Alliance Variant
Chr4:101119654 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1797 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs244246367
MGI SNP Detail
Alliance Variant
Chr4:101119699 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1752 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255923137
MGI SNP Detail
Alliance Variant
Chr4:101119713 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1738 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229072446
MGI SNP Detail
Alliance Variant
Chr4:101119721 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1730 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247806643
MGI SNP Detail
Alliance Variant
Chr4:101119731 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1720 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578556685
MGI SNP Detail
Alliance Variant
Chr4:101119745 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1706 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6364655
MGI SNP Detail
Alliance Variant
Chr4:101119837 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1614 bp proximal
SNP A/T T A
rs216372636
MGI SNP Detail
Alliance Variant
Chr4:101119941 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1510 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239665277
MGI SNP Detail
Alliance Variant
Chr4:101119942 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1509 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs6378081
MGI SNP Detail
Alliance Variant
Chr4:101119986 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1465 bp proximal
SNP A/G G A
rs251216705
MGI SNP Detail
Alliance Variant
Chr4:101119987 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1464 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213809147
MGI SNP Detail
Alliance Variant
Chr4:101120117 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1334 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231790792
MGI SNP Detail
Alliance Variant
Chr4:101120220 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1231 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249241324
MGI SNP Detail
Alliance Variant
Chr4:101120283 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1168 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs218206810
MGI SNP Detail
Alliance Variant
Chr4:101120285 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1166 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235409300
MGI SNP Detail
Alliance Variant
Chr4:101120290 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1161 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs263858081
MGI SNP Detail
Alliance Variant
Chr4:101120424 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1027 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs225177830
MGI SNP Detail
Alliance Variant
Chr4:101120451 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 1000 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247978512
MGI SNP Detail
Alliance Variant
Chr4:101120472 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 979 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262836288
MGI SNP Detail
Alliance Variant
Chr4:101120476 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 975 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219596814
MGI SNP Detail
Alliance Variant
Chr4:101120482 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 969 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238039596
MGI SNP Detail
Alliance Variant
Chr4:101120577 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 874 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs255975025
MGI SNP Detail
Alliance Variant
Chr4:101120582 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 869 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs582072890
MGI SNP Detail
Alliance Variant
Chr4:101120711 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 740 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265675324
MGI SNP Detail
Alliance Variant
Chr4:101121021 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 430 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231487215
MGI SNP Detail
Alliance Variant
Chr4:101121127 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 324 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255988147
MGI SNP Detail
Alliance Variant
Chr4:101121146 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 305 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213372298
MGI SNP Detail
Alliance Variant
Chr4:101121152 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 299 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs230383560
MGI SNP Detail
Alliance Variant
Chr4:101121207 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 244 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A C C A A A A A A C C C A A A A A A A A A A A A A A
rs243447919
MGI SNP Detail
Alliance Variant
Chr4:101121233 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 218 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs212426922
MGI SNP Detail
Alliance Variant
Chr4:101121263 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 188 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235498007
MGI SNP Detail
Alliance Variant
Chr4:101121298 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 153 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C A C C C C
rs260504583
MGI SNP Detail
Alliance Variant
Chr4:101121387 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 64 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213837833
MGI SNP Detail
Alliance Variant
Chr4:101121388 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 63 bp proximal
SNP A A A
rs238063868
MGI SNP Detail
Alliance Variant
Chr4:101121427 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 24 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262519851
MGI SNP Detail
Alliance Variant
Chr4:101121473 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219650541
MGI SNP Detail
Alliance Variant
Chr4:101121504 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238102656
MGI SNP Detail
Alliance Variant
Chr4:101121534 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256085385
MGI SNP Detail
Alliance Variant
Chr4:101121561 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs223465391
MGI SNP Detail
Alliance Variant
Chr4:101121589 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250093156
MGI SNP Detail
Alliance Variant
Chr4:101121625 Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T A T A T T T T T T T A T
rs263525636
MGI SNP Detail
Alliance Variant
Chr4:101121645 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231934097
MGI SNP Detail
Alliance Variant
Chr4:101121659 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243862636
MGI SNP Detail
Alliance Variant
Chr4:101121683 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs230814124
MGI SNP Detail
Alliance Variant
Chr4:101121728 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP G/T T G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223997927
MGI SNP Detail
Alliance Variant
Chr4:101121755 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs242041564
MGI SNP Detail
Alliance Variant
Chr4:101121764 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217078316
MGI SNP Detail
Alliance Variant
Chr4:101121783 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229604032
MGI SNP Detail
Alliance Variant
Chr4:101121807 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs259641011
MGI SNP Detail
Alliance Variant
Chr4:101121817 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217099475
MGI SNP Detail
Alliance Variant
Chr4:101121818 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240279099
MGI SNP Detail
Alliance Variant
Chr4:101121829 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs258049357
MGI SNP Detail
Alliance Variant
Chr4:101121871 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T
rs213848744
MGI SNP Detail
Alliance Variant
Chr4:101121877 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs230830446
MGI SNP Detail
Alliance Variant
Chr4:101121892 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249730952
MGI SNP Detail
Alliance Variant
Chr4:101121967 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs223516790
MGI SNP Detail
Alliance Variant
Chr4:101122018 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247428707
MGI SNP Detail
Alliance Variant
Chr4:101122153 Cpgi14497 within coordinates of
Jak1 Intron
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263313000
MGI SNP Detail
Alliance Variant
Chr4:101122271 Cpgi14497 within coordinates of
Jak1 mRNA-UTR
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224115486
MGI SNP Detail
Alliance Variant
Chr4:101122310 Cpgi14497 within coordinates of
Jak1 mRNA-UTR
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6305466
MGI SNP Detail
Alliance Variant
Chr4:101122325 Cpgi14497 within coordinates of
Jak1 mRNA-UTR
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/G A G
rs6305481
MGI SNP Detail
Alliance Variant
Chr4:101122337 Cpgi14497 within coordinates of
Jak1 mRNA-UTR
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP G/T G T
rs255226193
MGI SNP Detail
Alliance Variant
Chr4:101122396 Cpgi14497 within coordinates of
Jak1 mRNA-UTR
Jak1 Noncoding-Transcript-Variant
Rr596105 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C
rs224139286
MGI SNP Detail
Alliance Variant
Chr4:101122486 Cpgi14497 within coordinates of
Jak1 mRNA-UTR
Rr596105 18 bp distal
Rr596106 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs235685409
MGI SNP Detail
Chr4:101122495 Cpgi14497 within coordinates of
Rr596105 27 bp distal
Rr596106 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585870599
MGI SNP Detail
Chr4:101122589 Cpgi14497 within coordinates of
Rr596105 121 bp distal
Rr596106 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259576221
MGI SNP Detail
Chr4:101122601 Cpgi14497 within coordinates of
Rr596105 133 bp distal
Rr596106 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs233625862
MGI SNP Detail
Chr4:101122602 Cpgi14497 within coordinates of
Rr596105 134 bp distal
Rr596106 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A G A
rs254303152
MGI SNP Detail
Chr4:101122613 Cpgi14497 within coordinates of
Rr596105 145 bp distal
Rr596106 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217561153
MGI SNP Detail
Chr4:101122648 Cpgi14497 within coordinates of
Rr596105 180 bp distal
Rr596106 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580052587
MGI SNP Detail
Chr4:101122747 Cpgi14497 within coordinates of
Rr596105 279 bp distal
Rr596106 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs231978144
MGI SNP Detail
Chr4:101122772 Cpgi14497 within coordinates of
Rr596105 304 bp distal
Rr596106 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580524539
MGI SNP Detail
Chr4:101122844 Cpgi14497 within coordinates of
Rr596105 376 bp distal
Rr596106 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A
rs583034590
MGI SNP Detail
Chr4:101122851 Cpgi14497 within coordinates of
Rr596105 383 bp distal
Rr596106 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579700467
MGI SNP Detail
Chr4:101122863 Cpgi14497 within coordinates of
Rr596105 395 bp distal
Rr596106 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C A
rs246002624
MGI SNP Detail
Chr4:101122870 Cpgi14497 within coordinates of
Rr596105 402 bp distal
Rr596106 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213911729
MGI SNP Detail
Chr4:101122895 Cpgi14497 within coordinates of
Rr596105 427 bp distal
Rr596106 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230911110
MGI SNP Detail
Chr4:101122901 Rr596105 433 bp distal
Rr596106 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249743830
MGI SNP Detail
Chr4:101122916 Rr596105 448 bp distal
Rr596106 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217493451
MGI SNP Detail
Chr4:101122934 Rr596105 466 bp distal
Rr596106 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242146533
MGI SNP Detail
Chr4:101122966 Rr596105 498 bp distal
Rr596106 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259460642
MGI SNP Detail
Chr4:101122980 Rr596105 512 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs224216348
MGI SNP Detail
Chr4:101123060 Rr596105 592 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244070755
MGI SNP Detail
Chr4:101123103 Rr596105 635 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs249614961
MGI SNP Detail
Chr4:101123115 Rr596105 647 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218543027
MGI SNP Detail
Chr4:101123125 Rr596105 657 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235698423
MGI SNP Detail
Chr4:101123142 Rr596105 674 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259609404
MGI SNP Detail
Chr4:101123160 Rr596105 692 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G G A G G G G G A G G G G G G A G G G G G G G A G G A A
rs225452938
MGI SNP Detail
Chr4:101123187 Rr596105 719 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248561629
MGI SNP Detail
Chr4:101123188 Rr596105 720 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263002079
MGI SNP Detail
Chr4:101123196 Rr596105 728 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232639859
MGI SNP Detail
Chr4:101123245 Rr596105 777 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246063909
MGI SNP Detail
Chr4:101123366 Rr596105 898 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257821966
MGI SNP Detail
Chr4:101123393 Rr596105 925 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs225187666
MGI SNP Detail
Chr4:101123394 Rr596105 926 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 117

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory