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Mouse SNP Summary
Symbol
Name
ID
Rr596839
regulatory region 596839
MGI:8058971

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585415699
MGI SNP Detail
Chr4:106694281 Rr596839 1963 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580013746
MGI SNP Detail
Chr4:106694295 Rr596839 1949 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs234044959
MGI SNP Detail
Chr4:106694314 Rr596839 1930 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T T T T C T T T T T T T C T T T T
rs51027428
MGI SNP Detail
Chr4:106694316 Rr596839 1928 bp proximal
SNP C/T T C T
rs215742923
MGI SNP Detail
Chr4:106694333 Rr596834 within coordinates of
Rr596839 1911 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238392585
MGI SNP Detail
Chr4:106694348 Rr596834 within coordinates of
Rr596839 1896 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T A A T T T T T T A T T T T T T T T T T T T
rs587408081
MGI SNP Detail
Chr4:106694388 Rr596834 within coordinates of
Rr596839 1856 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs580159959
MGI SNP Detail
Chr4:106694390 Rr596834 within coordinates of
Rr596839 1854 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261998863
MGI SNP Detail
Chr4:106694429 Rr596834 within coordinates of
Rr596839 1815 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C C C C T C C C C C C C T C C C C
rs223443143
MGI SNP Detail
Chr4:106694468 Rr596839 1776 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236200424
MGI SNP Detail
Chr4:106694521 Rr596839 1723 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs583574190
MGI SNP Detail
Chr4:106694548 Rr596839 1696 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587140567
MGI SNP Detail
Chr4:106694573 Rr596839 1671 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250263847
MGI SNP Detail
Chr4:106694619 Rr596835 within coordinates of
Rr596839 1625 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222555578
MGI SNP Detail
Chr4:106694698 Rr596835 within coordinates of
Rr596839 1546 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs31748345
MGI SNP Detail
Chr4:106694707 Rr596835 within coordinates of
Rr596839 1537 bp proximal
SNP A/G A A A G
rs261427338
MGI SNP Detail
Chr4:106694713 Rr596835 within coordinates of
Rr596839 1531 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G G G G A G G G G G G G A G G G G
rs224272816
MGI SNP Detail
Chr4:106694715 Rr596835 within coordinates of
Rr596839 1529 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T T C C C C C C T C C C C C C C T C C C C
rs246561581
MGI SNP Detail
Chr4:106694798 Gm57074 within coordinates of
Gm69615 within coordinates of
Rr596836 within coordinates of
Rr596839 1446 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T T C C C C C C T C C C C C C C C C C C C
rs265169679
MGI SNP Detail
Chr4:106694875 Gm57074 within coordinates of
Gm69615 within coordinates of
Rr596836 within coordinates of
Rr596839 1369 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T T G G G G G G T G G G G G G G G G G G G
rs231216740
MGI SNP Detail
Chr4:106694901 Gm57074 within coordinates of
Gm69615 within coordinates of
Rr596836 within coordinates of
Rr596839 1343 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs242675003
MGI SNP Detail
Chr4:106695438 Cpgi14533 within coordinates of
Gm57074 within coordinates of
Rr596838 within coordinates of
Rr596839 806 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs254829826
MGI SNP Detail
Chr4:106695448 Cpgi14533 within coordinates of
Gm57074 within coordinates of
Rr596838 within coordinates of
Rr596839 796 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228778560
MGI SNP Detail
Chr4:106695488 Gm57074 within coordinates of
Rr596838 within coordinates of
Rr596839 756 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C T T C C C C C C T C C C C C C C C C C C C
rs584476800
MGI SNP Detail
Chr4:106695500 Gm57074 within coordinates of
Rr596838 within coordinates of
Rr596839 744 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233626471
MGI SNP Detail
Chr4:106695527 Gm57074 within coordinates of
Rr596838 within coordinates of
Rr596839 717 bp proximal
SNP C/G G C
rs215460458
MGI SNP Detail
Chr4:106695670 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596838 within coordinates of
Rr596839 574 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586621099
MGI SNP Detail
Chr4:106695852 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596838 within coordinates of
Rr596839 392 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs240579777
MGI SNP Detail
Chr4:106695874 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596838 within coordinates of
Rr596839 370 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G T G
rs250325589
MGI SNP Detail
Chr4:106695901 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596838 within coordinates of
Rr596839 343 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs581210838
MGI SNP Detail
Chr4:106695923 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 321 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214768327
MGI SNP Detail
Chr4:106696035 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 209 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T T C C C C C C T C C C C C C C C C C C C
rs229849728
MGI SNP Detail
Chr4:106696043 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 201 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C C C C T C C C C C C C C C C C C
rs250435295
MGI SNP Detail
Chr4:106696105 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 139 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216548487
MGI SNP Detail
Chr4:106696323 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 58 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs584567255
MGI SNP Detail
Chr4:106696343 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 78 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G G A A A A A A G A A A A A A G A A A
rs32208370
MGI SNP Detail
Chr4:106696456 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 191 bp distal
SNP C/G G G C G C
rs255423770
MGI SNP Detail
Chr4:106696523 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 258 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582387626
MGI SNP Detail
Chr4:106696578 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 313 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224410885
MGI SNP Detail
Chr4:106696587 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 322 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249334366
MGI SNP Detail
Chr4:106696597 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 332 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T T C C C C C C T C C C C C C C C C C C C
rs257112141
MGI SNP Detail
Chr4:106696722 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 457 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223236250
MGI SNP Detail
Chr4:106696729 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 464 bp distal
SNP C/T C C C C C C T T C T T T C C C C C C C C T C C C C C C C C C C C C T C C C C T C C T T C T T C C C C C
rs236236555
MGI SNP Detail
Chr4:106696738 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 473 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255005605
MGI SNP Detail
Chr4:106696810 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 545 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228742251
MGI SNP Detail
Chr4:106696835 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 570 bp distal
SNP A/G/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A T A
rs241860378
MGI SNP Detail
Chr4:106696836 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 571 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs265577669
MGI SNP Detail
Chr4:106696909 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 644 bp distal
Rr596840 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232140270
MGI SNP Detail
Chr4:106696923 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 658 bp distal
Rr596840 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs254981774
MGI SNP Detail
Chr4:106696992 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 727 bp distal
Rr596840 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T A A T T T T T T A T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214358227
MGI SNP Detail
Chr4:106697175 Cpgi14534 within coordinates of
Gm31125 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 910 bp distal
Rr596840 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs584706940
MGI SNP Detail
Chr4:106697397 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1132 bp distal
Rr596841 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257794330
MGI SNP Detail
Chr4:106697453 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1188 bp distal
Rr596842 within coordinates of
SNP A/G G A
rs32456809
MGI SNP Detail
Chr4:106697681 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1416 bp distal
Rr596842 within coordinates of
SNP A/G G A G A G
rs236256183
MGI SNP Detail
Chr4:106697706 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1441 bp distal
Rr596842 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C
rs258476249
MGI SNP Detail
Chr4:106697724 Cpgi14534 within coordinates of
Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1459 bp distal
Rr596842 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579255648
MGI SNP Detail
Chr4:106697925 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1660 bp distal
Rr596843 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217018711
MGI SNP Detail
Chr4:106697951 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1686 bp distal
Rr596843 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238809684
MGI SNP Detail
Chr4:106698016 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1751 bp distal
Rr596843 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs50433367
MGI SNP Detail
Chr4:106698163 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1898 bp distal
Rr596843 within coordinates of
SNP A/C C C A C A
rs32197884
MGI SNP Detail
Chr4:106698172 Gm57074 within coordinates of
Rr376971 within coordinates of
Rr596839 1907 bp distal
Rr596843 within coordinates of
SNP G/T G G T T
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Showing SNP(s) 1 - 61 of 61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory