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Mouse SNP Summary
Symbol
Name
ID
Rr596956
regulatory region 596956
MGI:8059088

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Showing SNP(s) 1 - 61 of 61

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228132565
MGI SNP Detail
Alliance Variant
Chr4:107105865 Lrrc42 Intron
Rr596956 1997 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs247198358
MGI SNP Detail
Alliance Variant
Chr4:107105887 Lrrc42 Intron
Rr596956 1975 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214881888
MGI SNP Detail
Alliance Variant
Chr4:107105995 Lrrc42 Intron
Rr596956 1867 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233244110
MGI SNP Detail
Alliance Variant
Chr4:107106116 Lrrc42 Intron
Rr596956 1746 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249704871
MGI SNP Detail
Alliance Variant
Chr4:107106118 Lrrc42 Intron
Rr596956 1744 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214731170
MGI SNP Detail
Alliance Variant
Chr4:107106129 Lrrc42 Intron
Rr596956 1733 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236096011
MGI SNP Detail
Alliance Variant
Chr4:107106130 Lrrc42 Intron
Rr596956 1732 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256167083
MGI SNP Detail
Alliance Variant
Chr4:107106237 Lrrc42 Intron
Rr596956 1625 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226012543
MGI SNP Detail
Alliance Variant
Chr4:107106286 Lrrc42 Intron
Rr596956 1576 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242174012
MGI SNP Detail
Alliance Variant
Chr4:107106475 Lrrc42 Intron
Rr596956 1387 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T T T T C T T T T T T T T T T T T
rs255400971
MGI SNP Detail
Alliance Variant
Chr4:107106666 Lrrc42 Intron
Rr596954 within coordinates of
Rr596956 1196 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221119148
MGI SNP Detail
Alliance Variant
Chr4:107106783 Lrrc42 Intron
Rr596954 within coordinates of
Rr596956 1079 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs241333654
MGI SNP Detail
Alliance Variant
Chr4:107106789 Lrrc42 Intron
Rr596954 within coordinates of
Rr596956 1073 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265178563
MGI SNP Detail
Alliance Variant
Chr4:107106825 Lrrc42 Intron
Rr596954 within coordinates of
Rr596956 1037 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231250414
MGI SNP Detail
Alliance Variant
Chr4:107107074 Lrrc42 Intron
Rr596954 within coordinates of
Rr596956 788 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244447432
MGI SNP Detail
Alliance Variant
Chr4:107107116 Lrrc42 Intron
Rr596954 within coordinates of
Rr596956 746 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262096714
MGI SNP Detail
Alliance Variant
Chr4:107107223 Lrrc42 Intron
Rr596956 639 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228703835
MGI SNP Detail
Alliance Variant
Chr4:107107238 Lrrc42 Intron
Rr596956 624 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T C C T T T T T T C T T T T T T T C T T T T
rs247230607
MGI SNP Detail
Alliance Variant
Chr4:107107242 Lrrc42 Intron
Rr596956 620 bp proximal
SNP A/C/G C C C C C C C C C C C C C C C C C C C G C A C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256959257
MGI SNP Detail
Alliance Variant
Chr4:107107334 Lrrc42 Intron
Rr596956 528 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227312533
MGI SNP Detail
Alliance Variant
Chr4:107107343 Lrrc42 Intron
Rr596956 519 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250351103
MGI SNP Detail
Alliance Variant
Chr4:107107458 Lrrc42 Intron
Rr596956 404 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215155207
MGI SNP Detail
Alliance Variant
Chr4:107107608 Lrrc42 Intron
Rr596956 254 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234675380
MGI SNP Detail
Alliance Variant
Chr4:107107703 Lrrc42 Intron
Rr596956 159 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254099035
MGI SNP Detail
Alliance Variant
Chr4:107107740 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 122 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217856531
MGI SNP Detail
Alliance Variant
Chr4:107107749 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 113 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236251827
MGI SNP Detail
Alliance Variant
Chr4:107107753 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 109 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255472948
MGI SNP Detail
Alliance Variant
Chr4:107107754 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 108 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221146652
MGI SNP Detail
Alliance Variant
Chr4:107107764 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 98 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234887068
MGI SNP Detail
Alliance Variant
Chr4:107107780 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 82 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T T T T C T T T T T T T C T T T T
rs257169977
MGI SNP Detail
Alliance Variant
Chr4:107107784 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 78 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223199171
MGI SNP Detail
Alliance Variant
Chr4:107107835 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 27 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C C T T T T T T C T T T T T T T C T T T T
rs241661748
MGI SNP Detail
Alliance Variant
Chr4:107107915 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 32 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs264948111
MGI SNP Detail
Alliance Variant
Chr4:107107952 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 69 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C A A C C C C A C C C C A A C C C C C C A C C C C C C C A C C C C
rs222223204
MGI SNP Detail
Alliance Variant
Chr4:107107965 Lrrc42 Intron
Rr596955 within coordinates of
Rr596956 82 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241813769
MGI SNP Detail
Alliance Variant
Chr4:107108054 Lrrc42 Intron
Rr596956 171 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs257002117
MGI SNP Detail
Alliance Variant
Chr4:107108055 Lrrc42 Intron
Rr596956 172 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227341826
MGI SNP Detail
Alliance Variant
Chr4:107108158 Lrrc42 Intron
Rr596956 275 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A T T A A A A A A A A A A A A A A A A
rs254931792
MGI SNP Detail
Alliance Variant
Chr4:107108173 Lrrc42 Intron
Rr596956 290 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262617909
MGI SNP Detail
Alliance Variant
Chr4:107108352 Lrrc42 Intron
Rr596956 469 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583122455
MGI SNP Detail
Alliance Variant
Chr4:107108370 Lrrc42 Intron
Rr596956 487 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585888274
MGI SNP Detail
Alliance Variant
Chr4:107108374 Lrrc42 Intron
Rr596956 491 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227694493
MGI SNP Detail
Alliance Variant
Chr4:107108498 Lrrc42 Intron
Rr596956 615 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs249917044
MGI SNP Detail
Alliance Variant
Chr4:107108673 Lrrc42 Intron
Rr596956 790 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216665240
MGI SNP Detail
Alliance Variant
Chr4:107108694 Lrrc42 Intron
Rr596956 811 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236288747
MGI SNP Detail
Alliance Variant
Chr4:107108704 Lrrc42 Intron
Rr596956 821 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246330932
MGI SNP Detail
Alliance Variant
Chr4:107108715 Lrrc42 Intron
Rr596956 832 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579874998
MGI SNP Detail
Alliance Variant
Chr4:107108837 Lrrc42 Intron
Rr596956 954 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262089449
MGI SNP Detail
Alliance Variant
Chr4:107108998 Lrrc42 Intron
Rr596956 1115 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223517053
MGI SNP Detail
Alliance Variant
Chr4:107109150 Lrrc42 Intron
Rr596956 1267 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236333040
MGI SNP Detail
Alliance Variant
Chr4:107109157 Lrrc42 Intron
Rr596956 1274 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256709999
MGI SNP Detail
Alliance Variant
Chr4:107109375 Lrrc42 Intron
Rr596956 1492 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222253006
MGI SNP Detail
Alliance Variant
Chr4:107109415 Lrrc42 Intron
Rr596956 1532 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241846788
MGI SNP Detail
Alliance Variant
Chr4:107109447 Lrrc42 Intron
Rr596956 1564 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T G G T T T T G T T T T G G T T T T T T G T T T T T T T G T T T T
rs257554343
MGI SNP Detail
Alliance Variant
Chr4:107109461 Lrrc42 Intron
Rr596956 1578 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221591698
MGI SNP Detail
Alliance Variant
Chr4:107109525 Lrrc42 Intron
Rr596956 1642 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242872678
MGI SNP Detail
Alliance Variant
Chr4:107109535 Lrrc42 Intron
Rr596956 1652 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265223191
MGI SNP Detail
Alliance Variant
Chr4:107109654 Lrrc42 Intron
Rr596956 1771 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs227351056
MGI SNP Detail
Alliance Variant
Chr4:107109719 Lrrc42 Intron
Rr596956 1836 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs244605109
MGI SNP Detail
Alliance Variant
Chr4:107109840 Lrrc42 Intron
Rr596956 1957 bp distal
Rr596957 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260643518
MGI SNP Detail
Alliance Variant
Chr4:107109855 Lrrc42 Intron
Rr596956 1972 bp distal
Rr596957 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 61 of 61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory