Mouse SNP Summary

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BLKS/J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	I/LnJ	JF1/Ms	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MAI/Pas	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SEG/Pas	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs253102140 MGI SNP Detail Alliance Variant	Chr4:107423573	Glis1 Intron Rr597017 1947 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		T	C	C	C	C
rs237798210 MGI SNP Detail Alliance Variant	Chr4:107423574	Glis1 Intron Rr597017 1946 bp proximal	SNP	A/G																																			A																							G
rs236636616 MGI SNP Detail Alliance Variant	Chr4:107423591	Glis1 Intron Rr597017 1929 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		G	C	C	C	C
rs249299278 MGI SNP Detail Alliance Variant	Chr4:107423618	Glis1 Intron Rr597017 1902 bp proximal	SNP	C/T	T	T	T		T	C	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T	C	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T		C	T	T	C	C
rs218606729 MGI SNP Detail Alliance Variant	Chr4:107423623	Glis1 Intron Rr597017 1897 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		A	G	G	G	G
rs235330635 MGI SNP Detail Alliance Variant	Chr4:107423651	Glis1 Intron Rr597017 1869 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		A	G	G	G	G
rs28129537 MGI SNP Detail Alliance Variant	Chr4:107423673	Glis1 Intron Rr597017 1847 bp proximal	SNP	A/G		G			G	A		G		G			G									G					G		G				G						G		G				G				G													A
rs28129536 MGI SNP Detail Alliance Variant	Chr4:107423719	Glis1 Intron Rr597017 1801 bp proximal	SNP	A/G		G			G	G				G												A					G		G				G		A				A		G				G				G									G				G
rs248274925 MGI SNP Detail Alliance Variant	Chr4:107423723	Glis1 Intron Rr597017 1797 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs259786600 MGI SNP Detail Alliance Variant	Chr4:107423784	Glis1 Intron Rr597017 1736 bp proximal	SNP	A/G	A	A	A		A	G	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	G	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	A	A	G	G
rs222647446 MGI SNP Detail Alliance Variant	Chr4:107423803	Glis1 Intron Rr597017 1717 bp proximal	SNP	G/T	T	T	T		T	G	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T	G	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	T	T	T	G	G
rs585969830 MGI SNP Detail Alliance Variant	Chr4:107423804	Glis1 Intron Rr597017 1716 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	T	G	G	G	G
rs580645009 MGI SNP Detail Alliance Variant	Chr4:107423805	Glis1 Intron Rr597017 1715 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	C	A	A	A	A
rs244171397 MGI SNP Detail Alliance Variant	Chr4:107423806	Glis1 Intron Rr597017 1714 bp proximal	SNP	G/T	T	T	T		T	G	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T	G	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	G	T	T	G	G
rs253949994 MGI SNP Detail Alliance Variant	Chr4:107423809	Glis1 Intron Rr597017 1711 bp proximal	SNP	A/T	A	A	A		A	T	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	T	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	T	A	A	T	T
rs224503321 MGI SNP Detail Alliance Variant	Chr4:107423834	Glis1 Intron Rr597017 1686 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	T	G	G	G	G
rs240995402 MGI SNP Detail Alliance Variant	Chr4:107423837	Glis1 Intron Rr597017 1683 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	T	A	A	A	A
rs260090033 MGI SNP Detail Alliance Variant	Chr4:107423871	Glis1 Intron Rr597017 1649 bp proximal	SNP	C/T	T	T	T		T	C	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T	C	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	C	T	T	C	C
rs231495673 MGI SNP Detail Alliance Variant	Chr4:107423890	Glis1 Intron Rr597017 1630 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs28129535 MGI SNP Detail Alliance Variant	Chr4:107423901	Glis1 Intron Rr597017 1619 bp proximal	SNP	C/T		T			T	C		T		T			T									T					T		T				T						T		T				T				T													C
rs213693581 MGI SNP Detail Alliance Variant	Chr4:107423934	Glis1 Intron Rr597017 1586 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs28129534 MGI SNP Detail Alliance Variant	Chr4:107423942	Glis1 Intron Rr597017 1578 bp proximal	SNP	A/G		G			G	A				G												G					G		G				G						G		G				G				G													A
rs243530078 MGI SNP Detail Alliance Variant	Chr4:107423969	Glis1 Intron Rr597017 1551 bp proximal	SNP	C/T	C	C	C		C	T	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C		C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	C	C	C	T
rs212544816 MGI SNP Detail Alliance Variant	Chr4:107423970	Glis1 Intron Rr597017 1550 bp proximal	SNP	A/G	G	G	G		G	A	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G		G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	G	G	G	A
rs235301457 MGI SNP Detail Alliance Variant	Chr4:107424039	Glis1 Intron Rr597017 1481 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BLKS/J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	I/LnJ	JF1/Ms	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MAI/Pas	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SEG/Pas	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs222376984 MGI SNP Detail Alliance Variant	Chr4:107424092	Glis1 Intron Rr597017 1428 bp proximal	SNP	C/T																																			C																							T
rs230369866 MGI SNP Detail Alliance Variant	Chr4:107424130	Glis1 Intron Rr597017 1390 bp proximal	SNP	C/T																																			T																							C
rs238125360 MGI SNP Detail Alliance Variant	Chr4:107424135	Glis1 Intron Rr597017 1385 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	A	C	C	C	C
rs263522650 MGI SNP Detail Alliance Variant	Chr4:107424247	Glis1 Intron Rr597017 1273 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	A	G	G	G	G
rs222863120 MGI SNP Detail Alliance Variant	Chr4:107424255	Glis1 Intron Rr597017 1265 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs28129533 MGI SNP Detail Alliance Variant	Chr4:107424290	Glis1 Intron Rr597017 1230 bp proximal	SNP	G/T		T			T			T		T			T									G					T		T				T		G				G		T				T				G									T				G
rs248575862 MGI SNP Detail Alliance Variant	Chr4:107424349	Glis1 Intron Rr597017 1171 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	A	A	A	A
rs218722782 MGI SNP Detail Alliance Variant	Chr4:107424362	Glis1 Intron Rr597017 1158 bp proximal	SNP	A/C	C	C	C		C	A	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	A	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	C	C	C	A	A
rs28129532 MGI SNP Detail Alliance Variant	Chr4:107424382	Glis1 Intron Rr597017 1138 bp proximal	SNP	C/T		T			T			T		T			T									C					T		T				T		C				C		T				T				T									T
rs28129531 MGI SNP Detail Alliance Variant	Chr4:107424399	Glis1 Intron Rr597017 1121 bp proximal	SNP	C/T		C			C	T		C		C			C									C					C		C				C						C		C				C				C													T
rs232367179 MGI SNP Detail Alliance Variant	Chr4:107424497	Glis1 Intron Rr597017 1023 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	A	G	G	G	G
rs28129530 MGI SNP Detail Alliance Variant	Chr4:107424505	Glis1 Intron Rr597017 1015 bp proximal	SNP	A/G		A			A	G		G		G			G									G					G		A				G						G		G				G				G													G
rs28129529 MGI SNP Detail Alliance Variant	Chr4:107424586	Glis1 Intron Rr597017 934 bp proximal	SNP	G/T		G			G			G		G			G									G					G		G				G						G		G				G				G													T
rs230827448 MGI SNP Detail Alliance Variant	Chr4:107424591	Glis1 Intron Rr597017 929 bp proximal	SNP	C/G	G	G	G		G	C	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	C	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		C	G	G	C	C
rs243496020 MGI SNP Detail Alliance Variant	Chr4:107424629	Glis1 Intron Rr597017 891 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		A	G	G	G	G
rs212858187 MGI SNP Detail Alliance Variant	Chr4:107424762	Glis1 Intron Rr597017 758 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		A	G	G	G	G
rs28129528 MGI SNP Detail Alliance Variant	Chr4:107424781	Glis1 Intron Rr597017 739 bp proximal	SNP	A/C		A			A	C		A		A			A									C					A		A				A		C				C		A				A													A				C
rs28129527 MGI SNP Detail Alliance Variant	Chr4:107424837	Glis1 Coding-Synonymous Glis1 mRNA-UTR Rr597017 683 bp proximal	SNP	A/G		G			G	G		A		G			A									G					G		G				G						G		A				G				G													G
rs215369024 MGI SNP Detail Alliance Variant	Chr4:107424852	Glis1 Coding-Synonymous Glis1 mRNA-UTR Rr597017 668 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		T	C	C	C	C
rs240687176 MGI SNP Detail Alliance Variant	Chr4:107424862	Glis1 Coding-NonSynonymous Glis1 mRNA-UTR Rr597017 658 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	C	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			C	G	G	G	G	G		G		G	G	G	G	G
rs28129526 MGI SNP Detail Alliance Variant	Chr4:107425026	Glis1 Coding-Synonymous Rr597017 494 bp proximal	SNP	G/T		G			G	T		G		G			G									G					G		G				G						G		G				G				G													T
rs214519480 MGI SNP Detail Alliance Variant	Chr4:107425062	Glis1 Coding-Synonymous Rr597017 458 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs232412686 MGI SNP Detail Alliance Variant	Chr4:107425073	Glis1 Coding-NonSynonymous Rr597017 447 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	C	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			C	T	T	T	T	T		T	T	T	T	T	T	T
rs248485077 MGI SNP Detail Alliance Variant	Chr4:107425077	Glis1 Coding-Synonymous Rr597017 443 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs219024809 MGI SNP Detail Alliance Variant	Chr4:107425260	Glis1 Coding-Synonymous Rr597017 260 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	A	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BLKS/J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	I/LnJ	JF1/Ms	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MAI/Pas	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SEG/Pas	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs234357759 MGI SNP Detail Alliance Variant	Chr4:107425404	Glis1 Coding-Synonymous Rr597017 116 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	C	T	T	T	T
rs264251123 MGI SNP Detail Alliance Variant	Chr4:107425414	Glis1 Coding-NonSynonymous Rr597017 106 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs13477897 MGI SNP Detail Alliance Variant	Chr4:107425435	Glis1 Coding-NonSynonymous Rr597017 85 bp proximal	SNP	A/G		A		A	A	G		G		G	G		G	G		G		G	G	G	G	G	G	G	G	G	G	G	A	G	G		G		G	A	G	G	G	G	G	G	G		G	A	G	G						G	G	G	G	G	G	G	G	G	G
rs249332189 MGI SNP Detail Alliance Variant	Chr4:107425449	Glis1 Coding-Synonymous Rr597017 71 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	A	A	A	A
rs28129525 MGI SNP Detail Alliance Variant	Chr4:107425467	Glis1 Coding-Synonymous Rr597017 53 bp proximal	SNP	C/T		T			T	T		T		T			T									C					T		T				T						C		T				T				T													T
rs220126638 MGI SNP Detail Alliance Variant	Chr4:107425479	Glis1 Coding-Synonymous Rr597017 41 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs28129524 MGI SNP Detail Alliance Variant	Chr4:107425551	Glis1 Coding-Synonymous Rr597017 10 bp distal	SNP	C/T		C			C	C		C		C			C									T					C		C				C		T				T		C				C				C									C				C
rs256727438 MGI SNP Detail Alliance Variant	Chr4:107425708	Glis1 Intron Rr597017 167 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	A	G	G	G	G
rs28129523 MGI SNP Detail Alliance Variant	Chr4:107425711	Glis1 Intron Rr597017 170 bp distal	SNP	C/T		C			C	C		C		C			C									T					C		C				C		T				T		C				C				C									C				C
rs579496640 MGI SNP Detail Alliance Variant	Chr4:107425721	Glis1 Intron Rr597017 180 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	T	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			T	C	C	C	C	C		C	C	C	C	C	C	C
rs248814364 MGI SNP Detail Alliance Variant	Chr4:107425747	Glis1 Intron Rr597017 206 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs244516530 MGI SNP Detail Alliance Variant	Chr4:107425757	Glis1 Intron Rr597017 216 bp distal	SNP	A/G																																			G																							A
rs265140912 MGI SNP Detail Alliance Variant	Chr4:107425776	Glis1 Intron Rr597017 235 bp distal	SNP	G/T																																			T																							G
rs28129522 MGI SNP Detail Alliance Variant	Chr4:107425854	Glis1 Intron Rr597017 313 bp distal	SNP	A/G		A			A	A		A		A			A									G					A		A				A		G				G		A				A				A									A				A
rs242500920 MGI SNP Detail Alliance Variant	Chr4:107425871	Glis1 Intron Rr597017 330 bp distal	SNP	A/C																																			A																							C
rs28129521 MGI SNP Detail Alliance Variant	Chr4:107425975	Glis1 Intron Rr597017 434 bp distal	SNP	C/T		C			C	C		C		C			C									T					C		C				C		T				T		C				C				C									C				C
rs242592403 MGI SNP Detail Alliance Variant	Chr4:107426000	Glis1 Intron Rr597017 459 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		T	G	G	G	G
rs28129520 MGI SNP Detail Alliance Variant	Chr4:107426035	Glis1 Intron Rr597017 494 bp distal	SNP	C/T		C			C	C		C		C			C									C					C		C				C						C		C				C				T													C
rs234725120 MGI SNP Detail Alliance Variant	Chr4:107426068	Glis1 Intron Rr597017 527 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	G	C	C	C	C
rs28129519 MGI SNP Detail Alliance Variant	Chr4:107426088	Glis1 Intron Rr597017 547 bp distal	SNP	C/G		G			G	G		G		G			G									C					G		G				G		C				C		G				G				G									G				G
rs28129518 MGI SNP Detail Alliance Variant	Chr4:107426160	Glis1 Intron Rr597017 619 bp distal	SNP	C/T		C			C	C		C		C			C									T					C		C				C		T				T		C				C				C									C				C
rs28129517 MGI SNP Detail Alliance Variant	Chr4:107426169	Glis1 Intron Rr597017 628 bp distal	SNP	C/T		T		T	T	C		C		C			C			C						C					C		T				C						C		C				C				T													T
rs28129516 MGI SNP Detail Alliance Variant	Chr4:107426211	Glis1 Intron Rr597017 670 bp distal	SNP	G/T		T			T	T		T		T			T									T					T		T				T						T		T				T				G													T
rs220465505 MGI SNP Detail Alliance Variant	Chr4:107426246	Glis1 Intron Rr597017 705 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs216706308 MGI SNP Detail Alliance Variant	Chr4:107426254	Glis1 Intron Rr597017 713 bp distal	SNP	A/G																																			G																							A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BLKS/J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	I/LnJ	JF1/Ms	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MAI/Pas	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SEG/Pas	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs28129515 MGI SNP Detail Alliance Variant	Chr4:107426263	Glis1 Intron Rr597017 722 bp distal	SNP	G/T		T			T	T		T		T			T														T		T				T		G						T				T				G									T				T
rs251421151 MGI SNP Detail Alliance Variant	Chr4:107426273	Glis1 Intron Rr597017 732 bp distal	SNP	A/G																																			A																							G
rs214069487 MGI SNP Detail Alliance Variant	Chr4:107426290	Glis1 Intron Rr597017 749 bp distal	SNP	C/T																																			T																							C
rs28129514 MGI SNP Detail Alliance Variant	Chr4:107426307	Glis1 Intron Rr597017 766 bp distal	SNP	C/G		G			G	G		G					G									G					G		G										G		G				G				C													G
rs230450868 MGI SNP Detail Alliance Variant	Chr4:107426370	Glis1 Intron Rr597017 829 bp distal	SNP	C/T																																			T																							C
rs250373364 MGI SNP Detail Alliance Variant	Chr4:107426400	Glis1 Intron Rr597017 859 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs256008562 MGI SNP Detail Alliance Variant	Chr4:107426401	Glis1 Intron Rr597017 860 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	A	A	A	A
rs223277025 MGI SNP Detail Alliance Variant	Chr4:107426430	Glis1 Intron Rr597017 889 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	A	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			A	T	T	T	T	T		T	T	T	T	T	T	T
rs242887236 MGI SNP Detail Alliance Variant	Chr4:107426464	Glis1 Intron Rr597017 923 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	G	C	C	C	C
rs213170738 MGI SNP Detail Alliance Variant	Chr4:107426478	Glis1 Intron Rr597017 937 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	T	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			T	C	C	C	C	C		C	C	C	C	C	C	C
rs28129513 MGI SNP Detail Alliance Variant	Chr4:107426517	Glis1 Intron Rr597017 976 bp distal	SNP	A/G		A			A	A		A		A			A									A					A		A				A						A		A				A				G													A
rs249384136 MGI SNP Detail Alliance Variant	Chr4:107426570	Glis1 Intron Rr597017 1029 bp distal	SNP	C/T																																			C																							T
rs223222321 MGI SNP Detail Alliance Variant	Chr4:107426578	Glis1 Intron Rr597017 1037 bp distal	SNP	C/G																																			C																							G
rs241120796 MGI SNP Detail Alliance Variant	Chr4:107426596	Glis1 Intron Rr597017 1055 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	A	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			A	G	G	G	G	G		G	G	G	G	G	G	G
rs257165956 MGI SNP Detail Alliance Variant	Chr4:107426600	Glis1 Intron Rr597017 1059 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	T	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			T	C	C	C	C	C		C	C	C	C	C	C	C
rs214501333 MGI SNP Detail Alliance Variant	Chr4:107426609	Glis1 Intron Rr597017 1068 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	A	G	G	G	G
rs230017991 MGI SNP Detail Alliance Variant	Chr4:107426630	Glis1 Intron Rr597017 1089 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	T	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			T	G	G	G	G	G		G	G	G	G	G	G	G
rs28129512 MGI SNP Detail Alliance Variant	Chr4:107426683	Glis1 Intron Rr597017 1142 bp distal	SNP	A/G		G			G	G		G		G			G									A					G		G				G		A				A		G				G				G									G				G
rs222527411 MGI SNP Detail Alliance Variant	Chr4:107426707	Glis1 Intron Rr597017 1166 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		A	G	G	G	G
rs28129511 MGI SNP Detail Alliance Variant	Chr4:107426720	Glis1 Intron Rr597017 1179 bp distal	SNP	C/T		C			C	C		C		C			C									T					C		C				C		T				T		C				C				C									C				C
rs28129510 MGI SNP Detail Alliance Variant	Chr4:107426731	Glis1 Intron Rr597017 1190 bp distal	SNP	A/G		G			G	G		G		G			G									G					G		G				G						G		G				G				A													G
rs224967185 MGI SNP Detail Alliance Variant	Chr4:107426772	Glis1 Intron Rr597017 1231 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	A	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			A	G	G	G	G	G		G		A	G	G	G	G
rs586616467 MGI SNP Detail Alliance Variant	Chr4:107426782	Glis1 Intron Rr597017 1241 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	T	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			T	C	C	C	C	C		C	C	C	C	C	C	C
rs28129509 MGI SNP Detail Alliance Variant	Chr4:107426796	Glis1 Intron Rr597017 1255 bp distal	SNP	A/G		A		A	A	G		G		G			G			G						G					G		A				G						G		G				G				G													G
rs28129508 MGI SNP Detail Alliance Variant	Chr4:107426839	Glis1 Intron Rr597017 1298 bp distal	SNP	A/G		G		G	G	G		A		A			A			A						G					A		G				A		G				G		A				A				G									A				G