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Mouse SNP Summary
Symbol
Name
ID 		Rr597230
regulatory region 597230
MGI:8059362

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs28150466
MGI SNP Detail
Alliance Variant		 Chr4:108702680 Rr597230 1998 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP A/T T T T T T T A T T T A T T A T
rs28150465
MGI SNP Detail
Alliance Variant		 Chr4:108702724 Rr597230 1954 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C T C C T C
rs264685937
MGI SNP Detail
Alliance Variant		 Chr4:108702737 Rr597230 1941 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229026951
MGI SNP Detail
Alliance Variant		 Chr4:108702748 Rr597230 1930 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28150464
MGI SNP Detail
Alliance Variant		 Chr4:108702758 Rr597230 1920 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP C/T C C C C C T C T C C C T C C C C
rs259998526
MGI SNP Detail
Alliance Variant		 Chr4:108702822 Rr597230 1856 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226804451
MGI SNP Detail
Alliance Variant		 Chr4:108702944 Rr597230 1734 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28150463
MGI SNP Detail
Alliance Variant		 Chr4:108702981 Rr597230 1697 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP C/T C C C C T T T T C T C T C T T C T
rs28150462
MGI SNP Detail
Alliance Variant		 Chr4:108703000 Rr597230 1678 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP A/G G G G G G A G A A A G A G A A A G A
rs231994230
MGI SNP Detail
Alliance Variant		 Chr4:108703179 Rr597230 1499 bp proximal
Txndc12 Coding-Synonymous
Txndc12 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249043536
MGI SNP Detail
Alliance Variant		 Chr4:108703188 Rr597230 1490 bp proximal
Txndc12 Coding-Synonymous
Txndc12 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212932335
MGI SNP Detail
Alliance Variant		 Chr4:108703194 Rr597230 1484 bp proximal
Txndc12 Coding-Synonymous
Txndc12 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239306311
MGI SNP Detail
Alliance Variant		 Chr4:108703221 Rr597230 1457 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs28150461
MGI SNP Detail
Alliance Variant		 Chr4:108703259 Rr597230 1419 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP A/G A A A A A G A G G G A G A A A G A A G
rs28150460
MGI SNP Detail
Alliance Variant		 Chr4:108703321 Rr597230 1357 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP C/T C C C C C T C T T T C T C C C T C C T
rs234344965
MGI SNP Detail
Alliance Variant		 Chr4:108703400 Rr597230 1278 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253913366
MGI SNP Detail
Alliance Variant		 Chr4:108703520 Rr597229 within coordinates of
Rr597230 1158 bp proximal
Txndc12 Intron
Txndc12 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219892358
MGI SNP Detail
Alliance Variant		 Chr4:108703910 Rr597230 768 bp proximal
Txndc12 Intron
 SNP A/G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G
rs247148556
MGI SNP Detail
Alliance Variant		 Chr4:108703963 Rr597230 715 bp proximal
Txndc12 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs587584953
MGI SNP Detail
Alliance Variant		 Chr4:108703964 Rr597230 714 bp proximal
Txndc12 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28150459
MGI SNP Detail
Alliance Variant		 Chr4:108704045 Rr597230 633 bp proximal
Txndc12 Intron
 SNP A/G G G G G G A G A G A G A G G G A G G A
rs221290431
MGI SNP Detail
Alliance Variant		 Chr4:108704054 Rr597230 624 bp proximal
Txndc12 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs28150458
MGI SNP Detail
Alliance Variant		 Chr4:108704063 Rr597230 615 bp proximal
Txndc12 Intron
 SNP A/T A A A T T T T A T A T
rs28150457
MGI SNP Detail
Alliance Variant		 Chr4:108704075 Rr597230 603 bp proximal
Txndc12 Intron
 SNP C/T T T T T T T T T T T T C T
rs28150456
MGI SNP Detail
Alliance Variant		 Chr4:108704089 Rr597230 589 bp proximal
Txndc12 Intron
 SNP C/T C C C C C T C T C T C T C C T C C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246073958
MGI SNP Detail
Alliance Variant		 Chr4:108704163 Rr597230 515 bp proximal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28150455
MGI SNP Detail
Alliance Variant		 Chr4:108704231 Rr597230 447 bp proximal
Txndc12 Intron
 SNP A/T A A A A A A A A A A T A A T A
rs260351943
MGI SNP Detail
Alliance Variant		 Chr4:108704243 Rr597230 435 bp proximal
Txndc12 Intron
 SNP C C C
rs28150454
MGI SNP Detail
Alliance Variant		 Chr4:108704309 Rr597230 369 bp proximal
Txndc12 Intron
 SNP A/G A A A A A G A G G G A G A G A G G A G
rs28150453
MGI SNP Detail
Alliance Variant		 Chr4:108704320 Rr597230 358 bp proximal
Txndc12 Intron
 SNP C/T C C C C C C C C C C T C C T C
rs212749934
MGI SNP Detail
Alliance Variant		 Chr4:108704325 Rr597230 353 bp proximal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28150452
MGI SNP Detail
Alliance Variant		 Chr4:108704363 Rr597230 315 bp proximal
Txndc12 Intron
 SNP A/G G G G G G G G G G G A G G A G
rs248603965
MGI SNP Detail
Alliance Variant		 Chr4:108704392 Rr597230 286 bp proximal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214978487
MGI SNP Detail
Alliance Variant		 Chr4:108704543 Rr597230 135 bp proximal
Txndc12 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581176350
MGI SNP Detail
Alliance Variant		 Chr4:108704589 Rr597230 89 bp proximal
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32081674
MGI SNP Detail
Alliance Variant		 Chr4:108704601 A730015C16Rik within coordinates of
Rr597230 77 bp proximal
Txndc12 Intron
 SNP C/T C C T T
rs28150451
MGI SNP Detail
Alliance Variant		 Chr4:108704721 A730015C16Rik within coordinates of
Rr597230 within coordinates of
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G A G
rs28150450
MGI SNP Detail
Alliance Variant		 Chr4:108704748 A730015C16Rik within coordinates of
Rr597230 within coordinates of
Txndc12 Intron
 SNP G/T T T T T T T T T T T G T T G T
rs213993629
MGI SNP Detail
Alliance Variant		 Chr4:108704825 A730015C16Rik within coordinates of
Rr597230 within coordinates of
Txndc12 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs237482314
MGI SNP Detail
Alliance Variant		 Chr4:108704838 A730015C16Rik within coordinates of
Rr597230 within coordinates of
Txndc12 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs28150449
MGI SNP Detail
Alliance Variant		 Chr4:108704861 A730015C16Rik within coordinates of
Rr597230 within coordinates of
Txndc12 Intron
 SNP C/T T T T T T T T T T T T T C T
rs28150448
MGI SNP Detail
Alliance Variant		 Chr4:108704924 A730015C16Rik within coordinates of
Rr398384 within coordinates of
Rr597230 within coordinates of
Txndc12 Intron
 SNP C/G C C C C C C C C C C G C C G C
rs250524352
MGI SNP Detail
Alliance Variant		 Chr4:108704950 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Rr398384 within coordinates of
Rr597230 within coordinates of
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253321092
MGI SNP Detail
Alliance Variant		 Chr4:108704998 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 mRNA-UTR
Rr398384 within coordinates of
Rr597230 6 bp distal
Txndc12 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs220920176
MGI SNP Detail
Alliance Variant		 Chr4:108705000 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 mRNA-UTR
Rr398384 within coordinates of
Rr597230 8 bp distal
Txndc12 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs584914339
MGI SNP Detail
Alliance Variant		 Chr4:108705001 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 mRNA-UTR
Rr398384 within coordinates of
Rr597230 9 bp distal
Txndc12 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs240060583
MGI SNP Detail
Alliance Variant		 Chr4:108705002 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 mRNA-UTR
Rr398384 within coordinates of
Rr597230 10 bp distal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255530426
MGI SNP Detail
Alliance Variant		 Chr4:108705018 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 mRNA-UTR
Rr398384 within coordinates of
Rr597230 26 bp distal
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231137169
MGI SNP Detail
Alliance Variant		 Chr4:108705082 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 mRNA-UTR
Rr398384 within coordinates of
Rr597230 90 bp distal
Tssr38317 within coordinates of
Txndc12 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs28150447
MGI SNP Detail
Alliance Variant		 Chr4:108705102 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr398384 within coordinates of
Rr597230 110 bp distal
Tssr38318 within coordinates of
Txndc12 Intron
 SNP A/G G G G G G G G G G G A G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264824174
MGI SNP Detail
Alliance Variant		 Chr4:108705120 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr398384 within coordinates of
Rr597230 128 bp distal
Tssr38318 within coordinates of
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs232969968
MGI SNP Detail
Alliance Variant		 Chr4:108705164 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr398384 within coordinates of
Rr597230 172 bp distal
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C T C C C C
rs248697466
MGI SNP Detail
Alliance Variant		 Chr4:108705214 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 222 bp distal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214924188
MGI SNP Detail
Alliance Variant		 Chr4:108705246 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 254 bp distal
Txndc12 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs28150446
MGI SNP Detail
Alliance Variant		 Chr4:108705275 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 283 bp distal
Txndc12 Intron
 SNP G/T G G G G G G G G G T G G T G
rs227943025
MGI SNP Detail
Alliance Variant		 Chr4:108705279 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 287 bp distal
Txndc12 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs28150445
MGI SNP Detail
Alliance Variant		 Chr4:108705327 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 335 bp distal
Txndc12 Intron
 SNP C/G G G G G G G G G G G C G G C G
rs13477903
MGI SNP Detail
Alliance Variant		 Chr4:108705354 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 362 bp distal
Txndc12 Intron
 SNP C/T T T T T T C T T C C C C C C C T T C C C C T C C C T T C C C C T C C C C T C C C T C T T C C T C C
rs239418044
MGI SNP Detail
Alliance Variant		 Chr4:108705387 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 395 bp distal
Txndc12 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578607667
MGI SNP Detail
Alliance Variant		 Chr4:108705427 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 435 bp distal
Txndc12 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs255822119
MGI SNP Detail
Alliance Variant		 Chr4:108705434 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 442 bp distal
Txndc12 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs582231462
MGI SNP Detail
Alliance Variant		 Chr4:108705435 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 443 bp distal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs213730176
MGI SNP Detail
Alliance Variant		 Chr4:108705440 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 448 bp distal
Txndc12 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234592766
MGI SNP Detail
Alliance Variant		 Chr4:108705449 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 457 bp distal
Txndc12 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs28150444
MGI SNP Detail
Alliance Variant		 Chr4:108705456 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 464 bp distal
Txndc12 Intron
 SNP C/G C C C C C C G C G G
rs220907001
MGI SNP Detail
Alliance Variant		 Chr4:108705462 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 470 bp distal
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs240255238
MGI SNP Detail
Alliance Variant		 Chr4:108705470 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 478 bp distal
Txndc12 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs249746387
MGI SNP Detail
Alliance Variant		 Chr4:108705492 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 500 bp distal
Txndc12 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A G A A A A
rs28150443
MGI SNP Detail
Alliance Variant		 Chr4:108705498 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 506 bp distal
Txndc12 Intron
 SNP C/G C C C C C G C G G G C G C C G C G
rs244129058
MGI SNP Detail
Alliance Variant		 Chr4:108705508 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 516 bp distal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs261916030
MGI SNP Detail
Alliance Variant		 Chr4:108705631 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 639 bp distal
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28150442
MGI SNP Detail
Alliance Variant		 Chr4:108705642 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 650 bp distal
Txndc12 Intron
 SNP A/C A A A A A A A A C A C A
rs242639397
MGI SNP Detail
Alliance Variant		 Chr4:108705653 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 661 bp distal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28150441
MGI SNP Detail
Alliance Variant		 Chr4:108705657 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 665 bp distal
Txndc12 Intron
 SNP C/T C C C C C C C T C C C C T T
rs28150440
MGI SNP Detail
Alliance Variant		 Chr4:108705747 A730015C16Rik within coordinates of
Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 755 bp distal
Txndc12 Intron
 SNP C/T T T T T C T C C C T C T C T C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs28150439
MGI SNP Detail
Alliance Variant		 Chr4:108705820 Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 828 bp distal
Txndc12 Intron
 SNP C/T T T T T T T C T T T C T T C T
rs28150438
MGI SNP Detail
Alliance Variant		 Chr4:108705912 Cpgi14566 within coordinates of
Kti12 Coding-Synonymous
Rr597230 920 bp distal
Txndc12 Intron
 SNP A/G G G G G G A G A A A G A G G G A G G A
rs28150437
MGI SNP Detail
Alliance Variant		 Chr4:108705967 Cpgi14566 within coordinates of
Kti12 Coding-NonSynonymous
Rr597230 975 bp distal
Txndc12 Intron
 SNP C/T T T T T T T T T T T C T T C T
rs213168434
MGI SNP Detail
Alliance Variant		 Chr4:108706181 Kti12 mRNA-UTR
Rr597230 1189 bp distal
Txndc12 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs234789348
MGI SNP Detail
Alliance Variant		 Chr4:108706185 Kti12 mRNA-UTR
Rr597230 1193 bp distal
Txndc12 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs247705203
MGI SNP Detail
Alliance Variant		 Chr4:108706198 Kti12 mRNA-UTR
Rr597230 1206 bp distal
Txndc12 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215481578
MGI SNP Detail
Alliance Variant		 Chr4:108706335 Kti12 mRNA-UTR
Rr597230 1343 bp distal
Txndc12 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs28150436
MGI SNP Detail
Alliance Variant		 Chr4:108706365 Kti12 mRNA-UTR
Rr597230 1373 bp distal
Txndc12 Intron
 SNP A/G G G G G A G A A A G A G G G A G G A
rs28150435
MGI SNP Detail
Alliance Variant		 Chr4:108706377 Kti12 mRNA-UTR
Rr597230 1385 bp distal
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C T C
rs47486509
MGI SNP Detail
Alliance Variant		 Chr4:108706398 Kti12 mRNA-UTR
Rr597230 1406 bp distal
Txndc12 Intron
 SNP G/T T G T T
rs31801815
MGI SNP Detail
Alliance Variant		 Chr4:108706401 Kti12 mRNA-UTR
Rr597230 1409 bp distal
Txndc12 Intron
 SNP A/G G A A G G
rs261630448
MGI SNP Detail
Alliance Variant		 Chr4:108706473 Kti12 mRNA-UTR
Rr597230 1481 bp distal
Txndc12 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs225730067
MGI SNP Detail
Alliance Variant		 Chr4:108706575 Kti12 mRNA-UTR
Rr597230 1583 bp distal
Txndc12 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242766654
MGI SNP Detail
Alliance Variant		 Chr4:108706598 Kti12 mRNA-UTR
Rr597230 1606 bp distal
Txndc12 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs258958535
MGI SNP Detail
Alliance Variant		 Chr4:108706696 Rr597230 1704 bp distal
Txndc12 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221655252
MGI SNP Detail
Alliance Variant		 Chr4:108706702 Rr597230 1710 bp distal
Txndc12 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs238752381
MGI SNP Detail
Alliance Variant		 Chr4:108706770 Rr597230 1778 bp distal
Txndc12 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262641772
MGI SNP Detail
Alliance Variant		 Chr4:108706772 Rr597230 1780 bp distal
Txndc12 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32212930
MGI SNP Detail
Alliance Variant		 Chr4:108706807 Rr597230 1815 bp distal
Txndc12 Intron
 SNP C/T C T T C C
rs32722200
MGI SNP Detail
Alliance Variant		 Chr4:108706812 Rr597230 1820 bp distal
Txndc12 Intron
 SNP C/T T C C T T
rs46303664
MGI SNP Detail
Alliance Variant		 Chr4:108706854 Rr597230 1862 bp distal
Txndc12 Intron
 SNP A A A
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Showing SNP(s) 1 - 96 of 96
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory