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Mouse SNP Summary
Symbol
Name
ID
Rr597444
regulatory region 597444
MGI:8059576

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222591349
MGI SNP Detail
Alliance Variant
Chr4:111112334 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1987 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239078814
MGI SNP Detail
Alliance Variant
Chr4:111112474 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1847 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs231201614
MGI SNP Detail
Alliance Variant
Chr4:111112747 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1574 bp proximal
SNP A/G A G
rs227010549
MGI SNP Detail
Alliance Variant
Chr4:111112787 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597443 within coordinates of
Rr597444 1534 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242309925
MGI SNP Detail
Alliance Variant
Chr4:111112827 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597443 within coordinates of
Rr597444 1494 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32746644
MGI SNP Detail
Alliance Variant
Chr4:111113006 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597443 within coordinates of
Rr597444 1315 bp proximal
SNP C/T T T T C T
rs218670516
MGI SNP Detail
Alliance Variant
Chr4:111113022 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1299 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs28253747
MGI SNP Detail
Alliance Variant
Chr4:111113033 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1288 bp proximal
SNP A/G G G G G A G G G A G A G G G G
rs28253746
MGI SNP Detail
Alliance Variant
Chr4:111113088 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1233 bp proximal
SNP C/T T T T T T T T C T T C T
rs229851893
MGI SNP Detail
Alliance Variant
Chr4:111113091 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1230 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253120601
MGI SNP Detail
Alliance Variant
Chr4:111113231 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1090 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265509034
MGI SNP Detail
Alliance Variant
Chr4:111113287 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1034 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs229112493
MGI SNP Detail
Alliance Variant
Chr4:111113302 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1019 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C C
rs246594508
MGI SNP Detail
Alliance Variant
Chr4:111113304 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1017 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A A
rs213019160
MGI SNP Detail
Alliance Variant
Chr4:111113314 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 1007 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223656962
MGI SNP Detail
Alliance Variant
Chr4:111113357 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 964 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244595975
MGI SNP Detail
Alliance Variant
Chr4:111113362 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 959 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213847104
MGI SNP Detail
Alliance Variant
Chr4:111113492 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 829 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs28253745
MGI SNP Detail
Alliance Variant
Chr4:111113538 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 783 bp proximal
SNP A/G G G G G G G G G G A G G A G
rs259008054
MGI SNP Detail
Alliance Variant
Chr4:111113560 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 761 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219627611
MGI SNP Detail
Alliance Variant
Chr4:111113594 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 727 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235773429
MGI SNP Detail
Alliance Variant
Chr4:111113608 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 713 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250726982
MGI SNP Detail
Alliance Variant
Chr4:111113651 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 670 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218639808
MGI SNP Detail
Alliance Variant
Chr4:111113682 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 639 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs28253744
MGI SNP Detail
Alliance Variant
Chr4:111113704 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 617 bp proximal
SNP C/T C C C C T C C C T T T C T C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262341833
MGI SNP Detail
Alliance Variant
Chr4:111113769 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 552 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222267622
MGI SNP Detail
Alliance Variant
Chr4:111113794 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 527 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248567658
MGI SNP Detail
Alliance Variant
Chr4:111113805 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 516 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263144298
MGI SNP Detail
Alliance Variant
Chr4:111113921 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 400 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T T T T
rs28253743
MGI SNP Detail
Alliance Variant
Chr4:111113956 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 365 bp proximal
SNP C/T T T C C C T T T
rs240686627
MGI SNP Detail
Alliance Variant
Chr4:111113971 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 350 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28253742
MGI SNP Detail
Alliance Variant
Chr4:111113981 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 340 bp proximal
SNP C/T T T C C T T C
rs223424809
MGI SNP Detail
Alliance Variant
Chr4:111114015 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 306 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251667491
MGI SNP Detail
Alliance Variant
Chr4:111114048 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 273 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs579260856
MGI SNP Detail
Alliance Variant
Chr4:111114100 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 221 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs214461930
MGI SNP Detail
Alliance Variant
Chr4:111114131 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 190 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A T A A A A A A T A A A A A A A A A A
rs232440794
MGI SNP Detail
Alliance Variant
Chr4:111114152 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 169 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217591610
MGI SNP Detail
Alliance Variant
Chr4:111114258 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr407178 within coordinates of
Rr597444 63 bp proximal
SNP A/T T A
rs28253741
MGI SNP Detail
Alliance Variant
Chr4:111114386 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 44 bp distal
SNP A/C C A A A C A A A A A C A A A
rs28253740
MGI SNP Detail
Alliance Variant
Chr4:111114406 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 64 bp distal
SNP A/G G G G G G G G G A G G A G
rs28253739
MGI SNP Detail
Alliance Variant
Chr4:111114486 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 144 bp distal
SNP C/T C C C C C C T C T C C C C
rs212321514
MGI SNP Detail
Alliance Variant
Chr4:111114558 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 216 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233255889
MGI SNP Detail
Alliance Variant
Chr4:111114691 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 349 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28253738
MGI SNP Detail
Alliance Variant
Chr4:111114706 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 364 bp distal
SNP C/T C C C C C C C C T C C T C
rs221847478
MGI SNP Detail
Alliance Variant
Chr4:111114734 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 392 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245897838
MGI SNP Detail
Alliance Variant
Chr4:111114753 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 411 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs28253737
MGI SNP Detail
Alliance Variant
Chr4:111114776 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 434 bp distal
SNP C/T C C C C C C C C C T C C T C
rs28253736
MGI SNP Detail
Alliance Variant
Chr4:111114777 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 435 bp distal
SNP A/G G G G G G G G G G A
rs240798568
MGI SNP Detail
Alliance Variant
Chr4:111114809 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 467 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28253735
MGI SNP Detail
Alliance Variant
Chr4:111114877 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 535 bp distal
SNP A/T A A A A A A A A T A A T A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223380906
MGI SNP Detail
Alliance Variant
Chr4:111115053 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 711 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246780588
MGI SNP Detail
Alliance Variant
Chr4:111115085 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 743 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262440548
MGI SNP Detail
Alliance Variant
Chr4:111115132 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 790 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581806672
MGI SNP Detail
Alliance Variant
Chr4:111115195 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 853 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs28253734
MGI SNP Detail
Alliance Variant
Chr4:111115227 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 885 bp distal
SNP A/G A A G A G G A A G G G A G A A
rs252317495
MGI SNP Detail
Alliance Variant
Chr4:111115229 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 887 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs28253733
MGI SNP Detail
Alliance Variant
Chr4:111115244 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 902 bp distal
SNP G/T G G G G G G G T G G T G
rs261340912
MGI SNP Detail
Alliance Variant
Chr4:111115278 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 936 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228601533
MGI SNP Detail
Alliance Variant
Chr4:111115395 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1053 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28253732
MGI SNP Detail
Alliance Variant
Chr4:111115413 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1071 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs212483413
MGI SNP Detail
Alliance Variant
Chr4:111115415 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1073 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237229213
MGI SNP Detail
Alliance Variant
Chr4:111115435 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1093 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28253731
MGI SNP Detail
Alliance Variant
Chr4:111115442 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1100 bp distal
SNP C/G C C C C C C C C C C G C C G C
rs28253730
MGI SNP Detail
Alliance Variant
Chr4:111115466 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1124 bp distal
SNP C/T T T T C C T C C C C T C T T
rs28253729
MGI SNP Detail
Alliance Variant
Chr4:111115503 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1161 bp distal
SNP C/T T C T C C T T C C C T C C C
rs28253728
MGI SNP Detail
Alliance Variant
Chr4:111115548 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1206 bp distal
SNP A/G G G A A G G G
rs222358942
MGI SNP Detail
Alliance Variant
Chr4:111115593 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1251 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs234037534
MGI SNP Detail
Alliance Variant
Chr4:111115605 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Agbl4 Splice-Site
Rr597444 1263 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28253727
MGI SNP Detail
Alliance Variant
Chr4:111115718 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1376 bp distal
SNP C/T T T C C C C T C C C C C C
rs217953654
MGI SNP Detail
Alliance Variant
Chr4:111115722 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1380 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs28253726
MGI SNP Detail
Alliance Variant
Chr4:111115743 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1401 bp distal
SNP A/G A A A A A A A G A A G A
rs265044958
MGI SNP Detail
Alliance Variant
Chr4:111115792 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1450 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs235599754
MGI SNP Detail
Alliance Variant
Chr4:111115818 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1476 bp distal
SNP C/T C T
rs247975217
MGI SNP Detail
Alliance Variant
Chr4:111115829 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1487 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261439799
MGI SNP Detail
Alliance Variant
Chr4:111115843 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1501 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228581957
MGI SNP Detail
Alliance Variant
Chr4:111115924 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1582 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244358851
MGI SNP Detail
Alliance Variant
Chr4:111115935 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1593 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256335526
MGI SNP Detail
Alliance Variant
Chr4:111115961 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1619 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231641308
MGI SNP Detail
Alliance Variant
Chr4:111115964 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1622 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28253725
MGI SNP Detail
Alliance Variant
Chr4:111116112 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1770 bp distal
SNP G/T G G G G G G G T G G T G
rs217470227
MGI SNP Detail
Alliance Variant
Chr4:111116127 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1785 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238184192
MGI SNP Detail
Alliance Variant
Chr4:111116155 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1813 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs245062596
MGI SNP Detail
Alliance Variant
Chr4:111116158 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1816 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs217192187
MGI SNP Detail
Alliance Variant
Chr4:111116170 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1828 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233959059
MGI SNP Detail
Alliance Variant
Chr4:111116179 Agbl4 Intron
Agbl4 Noncoding-Transcript-Variant
Rr597444 1837 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248626762
MGI SNP Detail
Alliance Variant
Chr4:111116258 Agbl4 Intron
Rr597444 1916 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220345870
MGI SNP Detail
Alliance Variant
Chr4:111116269 Agbl4 Intron
Rr597444 1927 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238989214
MGI SNP Detail
Alliance Variant
Chr4:111116322 Agbl4 Intron
Rr597444 1980 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257091577
MGI SNP Detail
Alliance Variant
Chr4:111116323 Agbl4 Intron
Rr597444 1981 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225034958
MGI SNP Detail
Alliance Variant
Chr4:111116327 Agbl4 Intron
Rr597444 1985 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 90 of 90

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory