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Mouse SNP Summary
Symbol
Name
ID 		Rr598258
regulatory region 598258
MGI:8060390

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs28272786
MGI SNP Detail
Alliance Variant		 Chr4:117770196 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598258 1947 bp proximal
 SNP A/G G G A G G G G G G A G G G G G G G
rs220218668
MGI SNP Detail
Alliance Variant		 Chr4:117770347 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598258 1796 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs28272785
MGI SNP Detail
Alliance Variant		 Chr4:117770393 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598258 1750 bp proximal
 SNP A/G A A A A A A G A A A A A A A A
rs28272784
MGI SNP Detail
Alliance Variant		 Chr4:117770510 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598258 1633 bp proximal
 SNP A/G G G A G G G G G G A G G G G G G G
rs224132418
MGI SNP Detail
Alliance Variant		 Chr4:117770568 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598258 1575 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G G G G G G G G G A G G G G G G G G G G G G
rs28272783
MGI SNP Detail
Alliance Variant		 Chr4:117770571 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598258 1572 bp proximal
 SNP C/T C C C C C C T C C C C C C C
rs258780260
MGI SNP Detail
Alliance Variant		 Chr4:117770737 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 1406 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28272782
MGI SNP Detail
Alliance Variant		 Chr4:117770949 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 1194 bp proximal
 SNP C/T T T T T T T T T T T T T T C T
rs235558013
MGI SNP Detail
Alliance Variant		 Chr4:117771095 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 1048 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C T T C C C C C C C C C C C C T C C C C C C C C C C C C
rs28272781
MGI SNP Detail
Alliance Variant		 Chr4:117771096 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 1047 bp proximal
 SNP A/G A A G A A A G G G A A A G A A A A
rs231576265
MGI SNP Detail
Alliance Variant		 Chr4:117771109 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 1034 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251104756
MGI SNP Detail
Alliance Variant		 Chr4:117771144 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 999 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32715453
MGI SNP Detail
Alliance Variant		 Chr4:117771169 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 974 bp proximal
 SNP C/T C T C T
rs231944592
MGI SNP Detail
Alliance Variant		 Chr4:117771170 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 973 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G T T G G G G G G G G G G G G T G G G G G G G T G G G G
rs248966992
MGI SNP Detail
Alliance Variant		 Chr4:117771356 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 787 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216802009
MGI SNP Detail
Alliance Variant		 Chr4:117771398 Ipo13 Intron
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 745 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C G G C C C C C C C C C C C C G C C C C C C C C C C C C
rs230855618
MGI SNP Detail
Alliance Variant		 Chr4:117771582 Cpgi14674 within coordinates of
Ipo13 mRNA-UTR
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 561 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C T T C C C C C C C C C C C C T C C C C C C C C C C C C
rs28272780
MGI SNP Detail
Alliance Variant		 Chr4:117771649 Cpgi14674 within coordinates of
Ipo13 mRNA-UTR
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 494 bp proximal
 SNP C/T C C C C C C C C C C C C C T C
rs214487841
MGI SNP Detail
Alliance Variant		 Chr4:117771684 Cpgi14674 within coordinates of
Ipo13 mRNA-UTR
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 459 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28272779
MGI SNP Detail
Alliance Variant		 Chr4:117771856 Cpgi14674 within coordinates of
Ipo13 mRNA-UTR
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 287 bp proximal
 SNP A/C C C A C C C C C A C C C C C C C
rs259473744
MGI SNP Detail
Alliance Variant		 Chr4:117771897 Cpgi14674 within coordinates of
Ipo13 mRNA-UTR
Ipo13 Noncoding-Transcript-Variant
Rr598257 within coordinates of
Rr598258 246 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28272778
MGI SNP Detail
Alliance Variant		 Chr4:117772331 Cpgi14674 within coordinates of
Ipo13 mRNA-UTR
Ipo13 Noncoding-Transcript-Variant
Rr398419 within coordinates of
Rr598258 167 bp distal
Rr598259 within coordinates of
Tssr43014 within coordinates of
 SNP C/G G G G G G G G G G G G G G C G
rs28272777
MGI SNP Detail
Alliance Variant		 Chr4:117772340 Cpgi14674 within coordinates of
Ipo13 mRNA-UTR
Ipo13 Noncoding-Transcript-Variant
Rr398419 within coordinates of
Rr598258 176 bp distal
Rr598259 within coordinates of
Tssr43014 within coordinates of
 SNP A/C C C C C C C C C C C A C C C C
rs240226940
MGI SNP Detail		 Chr4:117772439 Cpgi14674 within coordinates of
Rr398419 within coordinates of
Rr598258 275 bp distal
Rr598259 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252553457
MGI SNP Detail		 Chr4:117772495 Cpgi14674 within coordinates of
Rr398419 within coordinates of
Rr598258 331 bp distal
Rr598259 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs28272776
MGI SNP Detail		 Chr4:117772574 Cpgi14674 within coordinates of
Rr398419 within coordinates of
Rr598258 410 bp distal
Rr598259 within coordinates of
 SNP A/G A A G A A A A G G A A A G A A G A A
rs235704487
MGI SNP Detail		 Chr4:117772577 Cpgi14674 within coordinates of
Rr398419 within coordinates of
Rr598258 413 bp distal
Rr598259 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28272775
MGI SNP Detail		 Chr4:117772587 Cpgi14674 within coordinates of
Rr398419 within coordinates of
Rr598258 423 bp distal
Rr598259 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs222286460
MGI SNP Detail		 Chr4:117772700 Cpgi14674 within coordinates of
Rr598258 536 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246389434
MGI SNP Detail		 Chr4:117772768 Rr598258 604 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T A A T T T T T T T T T T T T A T T T T T T T T T T T T
rs263839423
MGI SNP Detail		 Chr4:117772837 Rr598258 673 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G G G G G G G G G A G G G G G G G A G G G G
rs232588900
MGI SNP Detail		 Chr4:117772910 Rr598258 746 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242984229
MGI SNP Detail		 Chr4:117772940 Rr598258 776 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs260874529
MGI SNP Detail		 Chr4:117773014 Rr598258 850 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225111619
MGI SNP Detail		 Chr4:117773046 Rr598258 882 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243727632
MGI SNP Detail		 Chr4:117773057 Rr598258 893 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215217759
MGI SNP Detail		 Chr4:117773110 Rr598258 946 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs28272774
MGI SNP Detail		 Chr4:117773228 Rr598258 1064 bp distal
 SNP C/T T T T T T T C T T T C T T T
rs258208722
MGI SNP Detail		 Chr4:117773254 Rr598258 1090 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215658026
MGI SNP Detail		 Chr4:117773324 Rr598258 1160 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A G G A A A A A A A A A A A A G A A A A A A A G A A A A
rs235175734
MGI SNP Detail		 Chr4:117773337 Rr598258 1173 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252508695
MGI SNP Detail		 Chr4:117773388 Rr598258 1224 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586027734
MGI SNP Detail		 Chr4:117773502 Rr598258 1338 bp distal
 SNP C/T C C C C T T C C C C C C T T C C C C T C C C C C C C C C T C C C T C T T T C C T C C C C T T C C C T C C C
rs212799896
MGI SNP Detail		 Chr4:117773542 Rr598258 1378 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs229721442
MGI SNP Detail		 Chr4:117773606 Rr598258 1442 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G G G G G G G G G A G G G G G G G G G G G G
rs580536002
MGI SNP Detail		 Chr4:117773655 Rr598258 1491 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs28272773
MGI SNP Detail		 Chr4:117773810 Rr598258 1646 bp distal
 SNP A/C C C C C C C C C C A C C C C
rs250310707
MGI SNP Detail		 Chr4:117773835 Rr598258 1671 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32826845
MGI SNP Detail		 Chr4:117773861 Rr598258 1697 bp distal
 SNP G/T T G
rs245901081
MGI SNP Detail		 Chr4:117773871 Rr598258 1707 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262717197
MGI SNP Detail		 Chr4:117773896 Rr598258 1732 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A G G A A A A A A A A A A A A G A A A A A A A G A A A A
rs32766590
MGI SNP Detail		 Chr4:117773900 Rr598258 1736 bp distal
 SNP C/T C T C C C
rs586720956
MGI SNP Detail		 Chr4:117773922 Rr598258 1758 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32847921
MGI SNP Detail		 Chr4:117773948 Rr598258 1784 bp distal
 SNP C/T C T C T
rs260845423
MGI SNP Detail		 Chr4:117773964 Rr598258 1800 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225265109
MGI SNP Detail		 Chr4:117774017 Rr598258 1853 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs237389018
MGI SNP Detail		 Chr4:117774094 Rr598258 1930 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262882468
MGI SNP Detail		 Chr4:117774134 Rr598258 1970 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230438170
MGI SNP Detail		 Chr4:117774148 Rr598258 1984 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253197228
MGI SNP Detail		 Chr4:117774155 Rr598258 1991 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T C C T T T T T T T T T T T T C T T T T T T T C T T T T
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Showing SNP(s) 1 - 60 of 60
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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