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Mouse SNP Summary
Symbol
Name
ID
Rr598275
regulatory region 598275
MGI:8060407

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216005708
MGI SNP Detail
Alliance Variant
Chr4:117837852 9530034E10Rik within coordinates of
Rr598275 1997 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232795936
MGI SNP Detail
Alliance Variant
Chr4:117837875 9530034E10Rik within coordinates of
Rr598275 1974 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T C C C T T T T T T T T T T T C T T T T T T T C T T T T
rs28256314
MGI SNP Detail
Alliance Variant
Chr4:117837884 9530034E10Rik within coordinates of
Rr598275 1965 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C T C C C T C C C T C
rs216533396
MGI SNP Detail
Alliance Variant
Chr4:117837908 9530034E10Rik within coordinates of
Rr598275 1941 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235375323
MGI SNP Detail
Alliance Variant
Chr4:117838034 9530034E10Rik within coordinates of
Rr598275 1815 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs260693733
MGI SNP Detail
Alliance Variant
Chr4:117838085 9530034E10Rik within coordinates of
Rr598275 1764 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223180944
MGI SNP Detail
Alliance Variant
Chr4:117838168 9530034E10Rik within coordinates of
Rr598275 1681 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245582196
MGI SNP Detail
Alliance Variant
Chr4:117838188 9530034E10Rik within coordinates of
Rr598275 1661 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253271858
MGI SNP Detail
Alliance Variant
Chr4:117838191 9530034E10Rik within coordinates of
Rr598275 1658 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A A G A A A A A A A A A A A A A A G A A G A A A G G G A A A A A A A A A A A G A A A A A A A G A A A A
rs220738232
MGI SNP Detail
Alliance Variant
Chr4:117838208 9530034E10Rik within coordinates of
Rr598275 1641 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240861262
MGI SNP Detail
Alliance Variant
Chr4:117838210 9530034E10Rik within coordinates of
Rr598275 1639 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32388527
MGI SNP Detail
Alliance Variant
Chr4:117838240 9530034E10Rik within coordinates of
Rr598275 1609 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G T T T T G
rs234388043
MGI SNP Detail
Alliance Variant
Chr4:117838289 9530034E10Rik within coordinates of
Rr598275 1560 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242546069
MGI SNP Detail
Alliance Variant
Chr4:117838306 9530034E10Rik within coordinates of
Rr598275 1543 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28256313
MGI SNP Detail
Alliance Variant
Chr4:117838340 9530034E10Rik within coordinates of
Rr598275 1509 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T C T T T T T C T T T C T
rs231022848
MGI SNP Detail
Alliance Variant
Chr4:117838356 9530034E10Rik within coordinates of
Rr598275 1493 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28256312
MGI SNP Detail
Alliance Variant
Chr4:117838384 9530034E10Rik within coordinates of
Rr598275 1465 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G A A A G G A G A G G G G G G
rs215966340
MGI SNP Detail
Alliance Variant
Chr4:117838408 9530034E10Rik within coordinates of
Rr598275 1441 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs226919109
MGI SNP Detail
Alliance Variant
Chr4:117838414 9530034E10Rik within coordinates of
Rr598275 1435 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs247394491
MGI SNP Detail
Alliance Variant
Chr4:117838466 9530034E10Rik within coordinates of
Rr598275 1383 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28256311
MGI SNP Detail
Alliance Variant
Chr4:117838467 9530034E10Rik within coordinates of
Rr598275 1382 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/C C C A C C C C C C A C C C A C
rs237099547
MGI SNP Detail
Alliance Variant
Chr4:117838517 9530034E10Rik within coordinates of
Rr598275 1332 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255427670
MGI SNP Detail
Alliance Variant
Chr4:117838518 9530034E10Rik within coordinates of
Rr598275 1331 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214997071
MGI SNP Detail
Alliance Variant
Chr4:117838529 9530034E10Rik within coordinates of
Rr598275 1320 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235929292
MGI SNP Detail
Alliance Variant
Chr4:117838562 9530034E10Rik within coordinates of
Rr598275 1287 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255611876
MGI SNP Detail
Alliance Variant
Chr4:117838675 9530034E10Rik within coordinates of
Rr598275 1174 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587551153
MGI SNP Detail
Alliance Variant
Chr4:117838684 9530034E10Rik within coordinates of
Rr598275 1165 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581562638
MGI SNP Detail
Alliance Variant
Chr4:117838686 9530034E10Rik within coordinates of
Rr598275 1163 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583271034
MGI SNP Detail
Alliance Variant
Chr4:117838739 9530034E10Rik within coordinates of
Rr598275 1110 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T C T C C C C C C C C C C C C C C
rs581085501
MGI SNP Detail
Alliance Variant
Chr4:117838823 9530034E10Rik within coordinates of
Rr598275 1026 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G G G G G G G G G G G G G G G G G G G G G
rs226236738
MGI SNP Detail
Alliance Variant
Chr4:117839033 9530034E10Rik within coordinates of
Rr598275 816 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245469892
MGI SNP Detail
Alliance Variant
Chr4:117839047 9530034E10Rik within coordinates of
Rr598275 802 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584517232
MGI SNP Detail
Alliance Variant
Chr4:117839079 9530034E10Rik within coordinates of
Rr598275 770 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581434941
MGI SNP Detail
Alliance Variant
Chr4:117839085 9530034E10Rik within coordinates of
Rr598275 764 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584844004
MGI SNP Detail
Alliance Variant
Chr4:117839087 9530034E10Rik within coordinates of
Rr598275 762 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs28256310
MGI SNP Detail
Alliance Variant
Chr4:117839118 9530034E10Rik within coordinates of
Rr598275 731 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C G C C C C
rs261658698
MGI SNP Detail
Alliance Variant
Chr4:117839119 9530034E10Rik within coordinates of
Rr598275 730 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223479278
MGI SNP Detail
Alliance Variant
Chr4:117839150 9530034E10Rik within coordinates of
Rr598275 699 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237731937
MGI SNP Detail
Alliance Variant
Chr4:117839172 9530034E10Rik within coordinates of
Rr598275 677 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs28256309
MGI SNP Detail
Alliance Variant
Chr4:117839173 9530034E10Rik within coordinates of
Rr598275 676 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C T C C C C C C T C C C T
rs226889070
MGI SNP Detail
Alliance Variant
Chr4:117839189 9530034E10Rik within coordinates of
Rr598275 660 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247557766
MGI SNP Detail
Alliance Variant
Chr4:117839207 9530034E10Rik within coordinates of
Rr598275 642 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265917390
MGI SNP Detail
Alliance Variant
Chr4:117839226 9530034E10Rik within coordinates of
Rr598275 623 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs28256308
MGI SNP Detail
Alliance Variant
Chr4:117839233 9530034E10Rik within coordinates of
Rr598275 616 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/C A A C A A A A A A C A A A C A
rs28256307
MGI SNP Detail
Alliance Variant
Chr4:117839262 9530034E10Rik within coordinates of
Rr598275 587 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/G C G C C C C G C C C G C
rs32309473
MGI SNP Detail
Alliance Variant
Chr4:117839275 9530034E10Rik within coordinates of
Rr598275 574 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G A G A
rs231603985
MGI SNP Detail
Alliance Variant
Chr4:117839296 9530034E10Rik within coordinates of
Rr598275 553 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T C T T T T T T T T T T T T T T T T T C T T T C C C T T T T T T T T T T T C T T T T T T T T T T T T
rs247045006
MGI SNP Detail
Alliance Variant
Chr4:117839309 9530034E10Rik within coordinates of
Rr598275 540 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215001883
MGI SNP Detail
Alliance Variant
Chr4:117839338 9530034E10Rik within coordinates of
Rr598275 511 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236059231
MGI SNP Detail
Alliance Variant
Chr4:117839382 9530034E10Rik within coordinates of
Rr598275 467 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259892032
MGI SNP Detail
Alliance Variant
Chr4:117839409 9530034E10Rik within coordinates of
Rr598275 440 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260471095
MGI SNP Detail
Alliance Variant
Chr4:117839410 9530034E10Rik within coordinates of
Rr598275 439 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/T T A
rs28256306
MGI SNP Detail
Alliance Variant
Chr4:117839425 9530034E10Rik within coordinates of
Rr598275 424 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A G A A A A A G A A A G A
rs579330397
MGI SNP Detail
Alliance Variant
Chr4:117839482 9530034E10Rik within coordinates of
Rr598275 367 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582821846
MGI SNP Detail
Alliance Variant
Chr4:117839490 9530034E10Rik within coordinates of
Rr598275 359 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs585578330
MGI SNP Detail
Alliance Variant
Chr4:117839492 9530034E10Rik within coordinates of
Rr598275 357 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261216582
MGI SNP Detail
Alliance Variant
Chr4:117839493 9530034E10Rik within coordinates of
Rr598275 356 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T C C C T T T T T T T T T T T C T T T T T T T C T T T T
rs223743004
MGI SNP Detail
Alliance Variant
Chr4:117839504 9530034E10Rik within coordinates of
Rr598275 345 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G A G G G G G G G G G G G G G G G G G A G G G A A A G G G G G G G G G G G A G G G G G G G G G G G G
rs237895039
MGI SNP Detail
Alliance Variant
Chr4:117839505 9530034E10Rik within coordinates of
Rr598275 344 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T C C C T T T T T T T T T T T C T T T T T T T C T T T T
rs258281879
MGI SNP Detail
Alliance Variant
Chr4:117839506 9530034E10Rik within coordinates of
Rr598275 343 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G G T G G G G G G G G G G G G G G T G G T G G G T T T G G G G G G G G G G G T G G G G G G G G G G G G
rs582175326
MGI SNP Detail
Alliance Variant
Chr4:117839511 9530034E10Rik within coordinates of
Rr598275 338 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220957602
MGI SNP Detail
Alliance Variant
Chr4:117839512 9530034E10Rik within coordinates of
Rr598275 337 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241734523
MGI SNP Detail
Alliance Variant
Chr4:117839516 9530034E10Rik within coordinates of
Rr598275 333 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/G G G G G C G G G G G G G G G G G G G G C G G C G G G C C C G G G G G G G G G G G C G G G G G G G C G G G G
rs28256305
MGI SNP Detail
Alliance Variant
Chr4:117839529 9530034E10Rik within coordinates of
Rr598275 320 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G T G G T G T G G G G G G
rs229350994
MGI SNP Detail
Alliance Variant
Chr4:117839536 9530034E10Rik within coordinates of
Rr598275 313 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C C C C T C C C T T T C C C C C C C C C C C T C C C C C C C C C C C C
rs28256304
MGI SNP Detail
Alliance Variant
Chr4:117839578 9530034E10Rik within coordinates of
Rr598275 271 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T C T T T T C T T T C T
rs265288720
MGI SNP Detail
Alliance Variant
Chr4:117839587 9530034E10Rik within coordinates of
Rr598275 262 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225629380
MGI SNP Detail
Alliance Variant
Chr4:117839628 9530034E10Rik within coordinates of
Rr598275 221 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs28256303
MGI SNP Detail
Alliance Variant
Chr4:117839688 9530034E10Rik within coordinates of
Rr598275 161 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C T C C C C C T C C C T C
rs585761334
MGI SNP Detail
Alliance Variant
Chr4:117839689 9530034E10Rik within coordinates of
Rr598275 160 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579665252
MGI SNP Detail
Alliance Variant
Chr4:117839706 9530034E10Rik within coordinates of
Rr598275 143 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28256302
MGI SNP Detail
Alliance Variant
Chr4:117839720 9530034E10Rik within coordinates of
Rr598275 129 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C T C C C C
rs247177191
MGI SNP Detail
Alliance Variant
Chr4:117839724 9530034E10Rik within coordinates of
Rr598275 125 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215063281
MGI SNP Detail
Alliance Variant
Chr4:117839801 9530034E10Rik within coordinates of
Rr598275 48 bp proximal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31752988
MGI SNP Detail
Alliance Variant
Chr4:117839854 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T T T G T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258976045
MGI SNP Detail
Alliance Variant
Chr4:117839873 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212470984
MGI SNP Detail
Alliance Variant
Chr4:117839904 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G A G G G G G G G G G G G G G G A G G A G G G A A A G G G G G G G G G G G A G G G G G G G G G G G G
rs235907367
MGI SNP Detail
Alliance Variant
Chr4:117839916 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C T C C T C C C T T T C C C C C C C C C C C T C C C C C C C T C C C C
rs255843532
MGI SNP Detail
Alliance Variant
Chr4:117840046 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214818145
MGI SNP Detail
Alliance Variant
Chr4:117840150 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs231660131
MGI SNP Detail
Alliance Variant
Chr4:117840187 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs252148585
MGI SNP Detail
Alliance Variant
Chr4:117840188 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs28256301
MGI SNP Detail
Alliance Variant
Chr4:117840354 9530034E10Rik within coordinates of
Rr598275 within coordinates of
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T C T T T T C T T T C T
rs28256300
MGI SNP Detail
Alliance Variant
Chr4:117840402 9530034E10Rik within coordinates of
Rr598275 10 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T T T G T T T T G T T T G T
rs48586969
MGI SNP Detail
Alliance Variant
Chr4:117840432 9530034E10Rik within coordinates of
Rr598275 40 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T C C C T T T T T T T T T T T C T T T T T T T T T T T
rs28256299
MGI SNP Detail
Alliance Variant
Chr4:117840463 9530034E10Rik within coordinates of
Rr598275 71 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A G A A A A A G A A A G A
rs28256298
MGI SNP Detail
Alliance Variant
Chr4:117840498 9530034E10Rik within coordinates of
Rr598275 106 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A G G G G G G A G G G G G G A G A G
rs28256297
MGI SNP Detail
Alliance Variant
Chr4:117840533 9530034E10Rik within coordinates of
Rr598275 141 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C T C C T T C
rs262762164
MGI SNP Detail
Alliance Variant
Chr4:117840561 9530034E10Rik within coordinates of
Rr598275 169 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C T C C T C C C T T T C C C C C C C C C C C T C C C C C C C C C C C C
rs28256296
MGI SNP Detail
Alliance Variant
Chr4:117840579 9530034E10Rik within coordinates of
Rr598275 187 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP G/T G G T G G G G G G T G G G T G
rs241247143
MGI SNP Detail
Alliance Variant
Chr4:117840605 9530034E10Rik within coordinates of
Rr598275 213 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C T C C T C C C T T T C C C C C C C C C C T C C C C C C C C C C C C
rs258938063
MGI SNP Detail
Alliance Variant
Chr4:117840606 9530034E10Rik within coordinates of
Rr598275 214 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229137435
MGI SNP Detail
Alliance Variant
Chr4:117840619 9530034E10Rik within coordinates of
Rr598275 227 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C T C C T C C C T T T C C C C C C C C C C C T C C C C C C C C C C C C
rs253703192
MGI SNP Detail
Alliance Variant
Chr4:117840834 9530034E10Rik within coordinates of
Rr598275 442 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T C C C T T T T T T T T T T T C T T T T T T T C T T T T
rs582615885
MGI SNP Detail
Alliance Variant
Chr4:117840939 9530034E10Rik within coordinates of
Rr598275 547 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs213023976
MGI SNP Detail
Alliance Variant
Chr4:117841047 9530034E10Rik within coordinates of
Rr598275 655 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227268086
MGI SNP Detail
Alliance Variant
Chr4:117841050 9530034E10Rik within coordinates of
Rr598275 658 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C T C C T C C C T T T C C C C C C C C C C C T C C C C C C C C C C C C
rs255936347
MGI SNP Detail
Alliance Variant
Chr4:117841072 9530034E10Rik within coordinates of
Rr598275 680 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/G A A A A G A A A A A A A A A A A A A A G A A G A A A G G G A A A A G A A A A A A G A A A A A A A G A A A A
rs28256295
MGI SNP Detail
Alliance Variant
Chr4:117841103 9530034E10Rik within coordinates of
Rr598275 711 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP C/T T T C T T T C T T C T T T C T
rs231716840
MGI SNP Detail
Alliance Variant
Chr4:117841128 9530034E10Rik within coordinates of
Rr598275 736 bp distal
St3gal3 Intron
St3gal3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 100 of 143

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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