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Mouse SNP Summary
Symbol
Name
ID
Rr598864
regulatory region 598864
MGI:8060996

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253738132
MGI SNP Detail
Chr4:120610536 Rr598864 1955 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222876199
MGI SNP Detail
Chr4:120610641 Rr598864 1850 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T C T T T C T T T T
rs32658824
MGI SNP Detail
Chr4:120610702 Rr598864 1789 bp proximal
SNP C/T C C T T C
rs264353922
MGI SNP Detail
Chr4:120610709 Rr598864 1782 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586486029
MGI SNP Detail
Chr4:120611038 Rr598864 1453 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580184468
MGI SNP Detail
Chr4:120611044 Rr598864 1447 bp proximal
SNP C/T T T T T T T T T T T T T T T C T T T T T T T T T T T C T T T C T T T T T
rs582578132
MGI SNP Detail
Chr4:120611077 Rr598864 1414 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585760110
MGI SNP Detail
Chr4:120611153 Rr598864 1338 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579729771
MGI SNP Detail
Chr4:120611203 Rr598864 1288 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs219993132
MGI SNP Detail
Chr4:120611269 Rr598864 1222 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242151763
MGI SNP Detail
Chr4:120611270 Rr598864 1221 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265077928
MGI SNP Detail
Chr4:120611323 Rr598864 1168 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225764065
MGI SNP Detail
Chr4:120611387 Rr598864 1104 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583205850
MGI SNP Detail
Chr4:120611441 Rr598864 1050 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244991842
MGI SNP Detail
Chr4:120611475 Rr598864 1016 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257825649
MGI SNP Detail
Chr4:120611630 Rr598864 861 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578384373
MGI SNP Detail
Chr4:120611712 Rr598864 779 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs582097298
MGI SNP Detail
Chr4:120611742 Rr598864 749 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585152727
MGI SNP Detail
Chr4:120611750 Rr598864 741 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579185068
MGI SNP Detail
Chr4:120611754 Rr598864 737 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T
rs31891482
MGI SNP Detail
Chr4:120611758 Rr598864 733 bp proximal
SNP C/T T C T
rs582678855
MGI SNP Detail
Chr4:120611762 Rr598864 729 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222418960
MGI SNP Detail
Chr4:120611766 Rr598864 725 bp proximal
SNP A/C/T C C C A C C C A C A A A A A A A T C C C C A A A C C C C C A C C C C A C A C C A
rs579106087
MGI SNP Detail
Chr4:120611770 Rr598864 721 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582164698
MGI SNP Detail
Chr4:120611774 Rr598864 717 bp proximal
SNP C/T C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579525749
MGI SNP Detail
Chr4:120611782 Rr598864 709 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs387052678
MGI SNP Detail
Chr4:120611794 Rr598864 697 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs387760535
MGI SNP Detail
Chr4:120611798 Rr598864 693 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C T C T
rs579070086
MGI SNP Detail
Chr4:120611802 Rr598864 689 bp proximal
SNP C/T C T T T T T T T T T T T T T T T C T T T T T T T
rs387209961
MGI SNP Detail
Chr4:120611844 Rr598864 647 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A
rs228078085
MGI SNP Detail
Chr4:120611895 Rr598864 596 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259936583
MGI SNP Detail
Chr4:120612079 Rr598864 412 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212279445
MGI SNP Detail
Chr4:120612159 Rr598864 332 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229621554
MGI SNP Detail
Chr4:120612188 Rr598864 303 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251029620
MGI SNP Detail
Chr4:120612483 Rr598864 8 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214773747
MGI SNP Detail
Chr4:120612551 Rr598864 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs233969968
MGI SNP Detail
Chr4:120612561 Rr598864 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253701809
MGI SNP Detail
Chr4:120612576 Rr598864 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216777256
MGI SNP Detail
Chr4:120612578 Rr598864 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240479762
MGI SNP Detail
Chr4:120612588 Rr598864 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261066607
MGI SNP Detail
Chr4:120612604 Rr598864 within coordinates of
Rr598865 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs220219787
MGI SNP Detail
Chr4:120612702 Rr598864 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C A C C C C C C A C C C A C C C C C C C C
rs244895264
MGI SNP Detail
Chr4:120612730 Rr598864 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257024091
MGI SNP Detail
Chr4:120612764 Rr598864 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220032929
MGI SNP Detail
Chr4:120612880 Rr598864 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239232753
MGI SNP Detail
Chr4:120612907 Rr598864 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C T C C C C C C C C
rs257731557
MGI SNP Detail
Chr4:120612908 Rr598864 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A G A A A A A A A A
rs228034296
MGI SNP Detail
Chr4:120612929 Rr598864 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A G A A A G A A A A
rs248125890
MGI SNP Detail
Chr4:120612991 Rr598864 9 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264547322
MGI SNP Detail
Chr4:120613011 Rr598864 29 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229099849
MGI SNP Detail
Chr4:120613081 Rr598864 99 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255634943
MGI SNP Detail
Chr4:120613103 Rr598864 121 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214735108
MGI SNP Detail
Chr4:120613227 Rr598864 245 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227715626
MGI SNP Detail
Chr4:120613260 Rr598864 278 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247644844
MGI SNP Detail
Chr4:120613419 Rr598864 437 bp distal
SNP A/G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216744043
MGI SNP Detail
Chr4:120613456 Rr598864 474 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs387148822
MGI SNP Detail
Chr4:120613476 Rr598864 494 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C T T C C
rs243199311
MGI SNP Detail
Chr4:120613739 Rr598864 757 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255616367
MGI SNP Detail
Chr4:120613761 Rr598864 779 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27499820
MGI SNP Detail
Chr4:120613802 Rr598864 820 bp distal
SNP C/G C C C C C C C C C C C C C G C
rs235328836
MGI SNP Detail
Chr4:120613841 Rr598864 859 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249550819
MGI SNP Detail
Chr4:120613904 Rr598864 922 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219976895
MGI SNP Detail
Chr4:120613938 Rr598864 956 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581179627
MGI SNP Detail
Chr4:120613955 Rr598864 973 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs52004976
MGI SNP Detail
Chr4:120613990 Rr598864 1008 bp distal
SNP C/G G C
rs27499819
MGI SNP Detail
Chr4:120614042 Rr598864 1060 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs251959453
MGI SNP Detail
Chr4:120614046 Rr598864 1064 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225380989
MGI SNP Detail
Chr4:120614059 Rr598864 1077 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250777782
MGI SNP Detail
Chr4:120614144 Rr598864 1162 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261303552
MGI SNP Detail
Chr4:120614233 Rr598864 1251 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228993952
MGI SNP Detail
Chr4:120614307 Rr598864 1325 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242895236
MGI SNP Detail
Chr4:120614374 Rr598864 1392 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258582517
MGI SNP Detail
Chr4:120614415 Rr598864 1433 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227678457
MGI SNP Detail
Alliance Variant
Chr4:120614811 Nfyc mRNA-UTR
Nfyc Noncoding-Transcript-Variant
Rr598864 1829 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs247611565
MGI SNP Detail
Alliance Variant
Chr4:120614826 Nfyc mRNA-UTR
Nfyc Noncoding-Transcript-Variant
Rr598864 1844 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 75 of 75

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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