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Mouse SNP Summary
Symbol
Name
ID 		Rr601941
regulatory region 601941
MGI:8064073

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Showing SNP(s) 1 - 31 of 31

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs28335327
MGI SNP Detail
Alliance Variant		 Chr4:134896703 Rr601941 1963 bp proximal
Runx3 Intron
 SNP A/G G G G G G G A G G A A G G A G
rs28335326
MGI SNP Detail
Alliance Variant		 Chr4:134896968 Rr601941 1698 bp proximal
Runx3 Intron
 SNP C/T C C C C C C T C C T T C C T C
rs28335325
MGI SNP Detail
Alliance Variant		 Chr4:134897756 Rr601941 910 bp proximal
Runx3 Intron
 SNP A/G G G G G G G G G G G G G A G G
rs28335324
MGI SNP Detail
Alliance Variant		 Chr4:134897835 Rr601941 831 bp proximal
Runx3 Intron
 SNP G/T T T T G G T G G G G G T G G G G G G
rs28335323
MGI SNP Detail
Alliance Variant		 Chr4:134897881 Rr601941 785 bp proximal
Runx3 Intron
 SNP C/T C C C T T C T C T T C C C T C C T T
rs28335322
MGI SNP Detail
Alliance Variant		 Chr4:134898655 Rr601941 11 bp proximal
Runx3 Intron
 SNP C/T C C T T C T C C C C C T C C C C C C
rs28335321
MGI SNP Detail
Alliance Variant		 Chr4:134898746 Rr601941 within coordinates of
Runx3 Intron
 SNP C/T C C C C C C C C C C C C C T C
rs3668192
MGI SNP Detail
Alliance Variant		 Chr4:134898848 Rr601941 within coordinates of
Runx3 Intron
 SNP C/T C C C C T T C T
rs28335320
MGI SNP Detail
Alliance Variant		 Chr4:134898862 Rr601941 within coordinates of
Runx3 Intron
 SNP A/G G G G G G G G G G G G G A G G
rs28335319
MGI SNP Detail
Alliance Variant		 Chr4:134898864 Rr601941 within coordinates of
Runx3 Intron
 SNP C/T C C C C C C C C C T T C C T C
rs3668757
MGI SNP Detail
Alliance Variant		 Chr4:134898905 Rr601941 within coordinates of
Runx3 Intron
 SNP A/G A A A A G G A G G G G G A G G G G G G
rs28335317
MGI SNP Detail
Alliance Variant		 Chr4:134899100 Rr601941 within coordinates of
Runx3 Intron
 SNP C/T C C C C C C T C C C C C C C C
rs28335316
MGI SNP Detail
Alliance Variant		 Chr4:134899278 Rr601941 150 bp distal
Runx3 Intron
 SNP G/T G G G G G G G G G T T G G T G
rs28335315
MGI SNP Detail
Alliance Variant		 Chr4:134899529 Rr601941 401 bp distal
Runx3 Intron
 SNP G/T G G G G G G T G G T T G G T G
rs28335314
MGI SNP Detail
Alliance Variant		 Chr4:134899563 Rr601941 435 bp distal
Runx3 Intron
 SNP G/T G G G G G G G G G T T G G T G
rs28335313
MGI SNP Detail
Alliance Variant		 Chr4:134899795 Rr601941 667 bp distal
Runx3 Intron
 SNP C/T T T T T T T T T T C C T T C T
rs28335312
MGI SNP Detail
Alliance Variant		 Chr4:134899853 Rr601941 725 bp distal
Runx3 Intron
 SNP C/T T T T T T T C T T C C T T C T
rs28335311
MGI SNP Detail
Alliance Variant		 Chr4:134899865 Rr601941 737 bp distal
Runx3 Intron
 SNP A/G G G G G G G G G G A A G G A G
rs28335310
MGI SNP Detail
Alliance Variant		 Chr4:134899894 Rr601941 766 bp distal
Runx3 Intron
 SNP C/T T T T T T T T T T C C T T C T
rs28335309
MGI SNP Detail
Alliance Variant		 Chr4:134899978 Rr601941 850 bp distal
Runx3 Intron
 SNP A/G A A A A A A A A A G G A A G A
rs28335308
MGI SNP Detail
Alliance Variant		 Chr4:134900033 Rr601941 905 bp distal
Runx3 Intron
 SNP A/G A A A A A A G A A G G A A G A
rs28335307
MGI SNP Detail
Alliance Variant		 Chr4:134900082 Rr601941 954 bp distal
Runx3 Intron
 SNP A/G G G G G G G G G G A A G G A G
rs28335306
MGI SNP Detail
Alliance Variant		 Chr4:134900093 Rr601941 965 bp distal
Runx3 Intron
 SNP A/C A A A A A A C A A C C A A C A
rs28335305
MGI SNP Detail
Alliance Variant		 Chr4:134900103 Rr601941 975 bp distal
Runx3 Intron
 SNP C/T C C C C C C C C C C C C C T
rs28335304
MGI SNP Detail
Alliance Variant		 Chr4:134900107 Rr601941 979 bp distal
Runx3 Intron
 SNP C/T C C C C C C T C C T T C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs28335303
MGI SNP Detail
Alliance Variant		 Chr4:134900509 Rr601941 1381 bp distal
Runx3 Intron
 SNP G/T T T T T T T G T T G G T T G T
rs28335302
MGI SNP Detail
Alliance Variant		 Chr4:134900674 Rr601941 1546 bp distal
Runx3 Intron
 SNP C/T T T T T T T C T T C C T T C T
rs28335301
MGI SNP Detail
Alliance Variant		 Chr4:134900923 Rr601941 1795 bp distal
Runx3 Intron
 SNP A/G G G G G G G A G G A A G G A G
rs28335300
MGI SNP Detail
Alliance Variant		 Chr4:134900946 Rr601941 1818 bp distal
Runx3 Intron
 SNP A/G G G G G G G A G G A A G G A G
rs28335299
MGI SNP Detail
Alliance Variant		 Chr4:134901011 Rr601941 1883 bp distal
Runx3 Intron
 SNP A/C C C C C C C A C C A A C C A C
rs28335298
MGI SNP Detail
Alliance Variant		 Chr4:134901057 Rr601941 1929 bp distal
Runx3 Intron
 SNP A/G G G G G G G A G G A A G G A G
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Showing SNP(s) 1 - 31 of 31
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory