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Mouse SNP Summary
Symbol
Name
ID
Rr601952
regulatory region 601952
MGI:8064084

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Showing SNP(s) 1 - 73 of 73

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs50656752
MGI SNP Detail
Alliance Variant
Chr4:134945171 Clic4 Intron
Rr601952 1956 bp proximal
SNP A/G G A G A G
rs47114572
MGI SNP Detail
Alliance Variant
Chr4:134945180 Clic4 Intron
Rr601952 1947 bp proximal
SNP A/G A G G A
rs47178627
MGI SNP Detail
Alliance Variant
Chr4:134945217 Clic4 Intron
Rr601952 1910 bp proximal
SNP C/T C T T C
rs49397415
MGI SNP Detail
Alliance Variant
Chr4:134945219 Clic4 Intron
Rr601952 1908 bp proximal
SNP A/G A G G A
rs46995018
MGI SNP Detail
Alliance Variant
Chr4:134945307 Clic4 Intron
Rr601952 1820 bp proximal
SNP A/T A T A T A
rs46764734
MGI SNP Detail
Alliance Variant
Chr4:134945314 Clic4 Intron
Rr601952 1813 bp proximal
SNP G/T G T T G
rs46314430
MGI SNP Detail
Alliance Variant
Chr4:134945317 Clic4 Intron
Rr601952 1810 bp proximal
SNP C/T T C C T
rs27608490
MGI SNP Detail
Alliance Variant
Chr4:134945347 Clic4 Intron
Rr601952 1780 bp proximal
SNP A/G G G G G G G G G G A A G G A G
rs27608489
MGI SNP Detail
Alliance Variant
Chr4:134945364 Clic4 Intron
Rr601952 1763 bp proximal
SNP A/G A G G A A G A A A A G A A A A A A
rs258308555
MGI SNP Detail
Alliance Variant
Chr4:134945477 Clic4 Intron
Rr601952 1650 bp proximal
SNP G G G
rs219546320
MGI SNP Detail
Alliance Variant
Chr4:134945496 Clic4 Intron
Rr601952 1631 bp proximal
SNP A A A
rs238633647
MGI SNP Detail
Alliance Variant
Chr4:134945507 Clic4 Intron
Rr601952 1620 bp proximal
SNP C C C
rs27608488
MGI SNP Detail
Alliance Variant
Chr4:134945561 Clic4 Intron
Rr601952 1566 bp proximal
SNP G/T T T G G T T T T T T T T T T T
rs27608487
MGI SNP Detail
Alliance Variant
Chr4:134945576 Clic4 Intron
Rr601952 1551 bp proximal
SNP A/G G G G G G G A G G A A G G A G
rs27608486
MGI SNP Detail
Alliance Variant
Chr4:134945610 Clic4 Intron
Rr601952 1517 bp proximal
SNP G/T T T T T G G G T T T T G T T T
rs6396722
MGI SNP Detail
Alliance Variant
Chr4:134946051 Clic4 Intron
Rr601952 1076 bp proximal
SNP C/T C C C T C T C C C C T C C C
rs47070267
MGI SNP Detail
Alliance Variant
Chr4:134946088 Clic4 Intron
Rr601952 1039 bp proximal
SNP A/G G A G A
rs27608485
MGI SNP Detail
Alliance Variant
Chr4:134946170 Clic4 Intron
Rr601952 957 bp proximal
SNP C/T T C C C C C C T C C C C T C T T
rs27608484
MGI SNP Detail
Alliance Variant
Chr4:134946235 Clic4 Intron
Rr601952 892 bp proximal
SNP A/T A A A A A A A A A A A A T A A
rs6397883
MGI SNP Detail
Alliance Variant
Chr4:134946322 Clic4 Intron
Rr601952 805 bp proximal
SNP C/T C C C C T T C T C C T C C C C T C C C C
rs6398394
MGI SNP Detail
Alliance Variant
Chr4:134946358 Clic4 Intron
Rr601952 769 bp proximal
SNP A/G G G G G G G G G A G G A A G G A G
rs27608483
MGI SNP Detail
Alliance Variant
Chr4:134946521 Clic4 Intron
Rr601952 606 bp proximal
SNP A/G G G G G A A G A G A G G G G A G G G G
rs27608482
MGI SNP Detail
Alliance Variant
Chr4:134946564 Clic4 Intron
Rr601952 563 bp proximal
SNP A/T A A T T T T T T T T T A A T T A T
rs27608481
MGI SNP Detail
Alliance Variant
Chr4:134946610 Clic4 Intron
Rr601952 517 bp proximal
SNP A/G A A G G G G G G G G G G G G G G G
rs46852752
MGI SNP Detail
Alliance Variant
Chr4:134946675 Clic4 Intron
Rr601952 452 bp proximal
SNP C/T C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs32235068
MGI SNP Detail
Alliance Variant
Chr4:134946691 Clic4 Intron
Rr601952 436 bp proximal
SNP C/T C C C T T
rs46834133
MGI SNP Detail
Alliance Variant
Chr4:134946714 Clic4 Intron
Rr601952 413 bp proximal
SNP A/G G A G
rs27608480
MGI SNP Detail
Alliance Variant
Chr4:134946726 Clic4 Intron
Rr601952 401 bp proximal
SNP A/G A A G G G G G G G G G G G G G G G
rs47602635
MGI SNP Detail
Alliance Variant
Chr4:134946763 Clic4 Intron
Rr601952 364 bp proximal
SNP A/C A C C A
rs49495161
MGI SNP Detail
Alliance Variant
Chr4:134946776 Clic4 Intron
Rr601952 351 bp proximal
SNP A/T A T A
rs48599711
MGI SNP Detail
Alliance Variant
Chr4:134946785 Clic4 Intron
Rr601952 342 bp proximal
SNP A/G G A
rs49174366
MGI SNP Detail
Alliance Variant
Chr4:134946806 Clic4 Intron
Rr601952 321 bp proximal
SNP G/T G T T G
rs51378595
MGI SNP Detail
Alliance Variant
Chr4:134947007 Clic4 Intron
Rr601952 120 bp proximal
SNP C/T C T C T T
rs27608479
MGI SNP Detail
Alliance Variant
Chr4:134947090 Clic4 Intron
Rr601951 within coordinates of
Rr601952 37 bp proximal
SNP C/T C C T T T T C C T T C T
rs50687115
MGI SNP Detail
Alliance Variant
Chr4:134947099 Clic4 Intron
Rr601951 within coordinates of
Rr601952 28 bp proximal
SNP C/T T C C
rs27608478
MGI SNP Detail
Alliance Variant
Chr4:134947128 Clic4 Intron
Rr601951 within coordinates of
Rr601952 within coordinates of
SNP C/T T T T T C C T C C C T T C C T C C
rs27608477
MGI SNP Detail
Alliance Variant
Chr4:134947151 Clic4 Intron
Rr601951 within coordinates of
Rr601952 3 bp distal
SNP A/G A A A A A G A A A A A A G G
rs51465820
MGI SNP Detail
Alliance Variant
Chr4:134947173 Clic4 Intron
Rr601951 within coordinates of
Rr601952 25 bp distal
SNP A/G A G A G A
rs52100722
MGI SNP Detail
Alliance Variant
Chr4:134947206 Clic4 Intron
Rr601951 within coordinates of
Rr601952 58 bp distal
SNP C/T T C T C T
rs52215531
MGI SNP Detail
Alliance Variant
Chr4:134947228 Clic4 Intron
Rr601951 within coordinates of
Rr601952 80 bp distal
SNP A/G A G A G A
rs52211830
MGI SNP Detail
Alliance Variant
Chr4:134947283 Clic4 Intron
Rr601952 135 bp distal
SNP A/T T A T A T
rs52300625
MGI SNP Detail
Alliance Variant
Chr4:134947294 Clic4 Intron
Rr601952 146 bp distal
SNP C/T C T C T C
rs52284711
MGI SNP Detail
Alliance Variant
Chr4:134947305 Clic4 Intron
Rr601952 157 bp distal
SNP A/T A T A T A
rs27608476
MGI SNP Detail
Alliance Variant
Chr4:134947402 Clic4 Intron
Rr601952 254 bp distal
SNP C/T C C C C T T C C T T C C C T T C T T
rs45775388
MGI SNP Detail
Alliance Variant
Chr4:134947449 Clic4 Intron
Rr601952 301 bp distal
SNP A/G G A G A
rs46583649
MGI SNP Detail
Alliance Variant
Chr4:134947451 Clic4 Intron
Rr601952 303 bp distal
SNP A/C A C A C
rs27608475
MGI SNP Detail
Alliance Variant
Chr4:134947513 Clic4 Intron
Rr601952 365 bp distal
SNP A/G G A A G G A A G G G A G G G G G G
rs27608474
MGI SNP Detail
Alliance Variant
Chr4:134947565 Clic4 Intron
Rr601952 417 bp distal
SNP C/G G G C C G G C G G G G C G G G G G G
rs27608473
MGI SNP Detail
Alliance Variant
Chr4:134947722 Clic4 Intron
Rr601952 574 bp distal
SNP C/T C C C T T C C T T C C C T T C T T
rs27608472
MGI SNP Detail
Alliance Variant
Chr4:134947819 Clic4 Intron
Rr601952 671 bp distal
SNP A/T T T A A T T A T T T A T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs27608471
MGI SNP Detail
Alliance Variant
Chr4:134947925 Clic4 Intron
Rr601952 777 bp distal
SNP A/G G G A A A A A A G G A A G A
rs27608470
MGI SNP Detail
Alliance Variant
Chr4:134947957 Clic4 Intron
Rr601952 809 bp distal
SNP A/G G G A A A A A A A A G G A A G A
rs50900097
MGI SNP Detail
Alliance Variant
Chr4:134948026 Clic4 Intron
Rr601952 878 bp distal
SNP C/T C T C T C
rs46612473
MGI SNP Detail
Alliance Variant
Chr4:134948138 Clic4 Intron
Rr601952 990 bp distal
SNP A/G G A A
rs27608469
MGI SNP Detail
Alliance Variant
Chr4:134948140 Clic4 Intron
Rr601952 992 bp distal
SNP C/T C C C T T C C T T C C C T C T T
rs27608468
MGI SNP Detail
Alliance Variant
Chr4:134948220 Clic4 Intron
Rr601952 1072 bp distal
SNP A/T T A A A A A A A A A A A A A A
rs27608467
MGI SNP Detail
Alliance Variant
Chr4:134948318 Clic4 Intron
Rr601952 1170 bp distal
SNP A/G A A A A A A G A A A A A A A A
rs27608466
MGI SNP Detail
Alliance Variant
Chr4:134948382 Clic4 Intron
Rr601952 1234 bp distal
SNP A/T A A A T A T A A A T A A A
rs27608465
MGI SNP Detail
Alliance Variant
Chr4:134948417 Clic4 Intron
Rr601952 1269 bp distal
SNP C/T C T T C T T T C C C T C C T T
rs27608464
MGI SNP Detail
Alliance Variant
Chr4:134948477 Clic4 Intron
Rr601952 1329 bp distal
SNP A/G G G G G G G G G G G G G G A G
rs27608463
MGI SNP Detail
Alliance Variant
Chr4:134948508 Clic4 Intron
Rr601952 1360 bp distal
SNP C/T T T T T C C C T T T T C C T T T
rs27608462
MGI SNP Detail
Alliance Variant
Chr4:134948539 Clic4 Intron
Rr601952 1391 bp distal
SNP A/G G G G G G G G G G A A G G G
rs27608461
MGI SNP Detail
Alliance Variant
Chr4:134948613 Clic4 Intron
Rr601952 1465 bp distal
SNP A/G G G G G G G G G G A A G G G G
rs51682848
MGI SNP Detail
Alliance Variant
Chr4:134948645 Clic4 Intron
Rr601952 1497 bp distal
SNP C/T T C
rs252001787
MGI SNP Detail
Alliance Variant
Chr4:134948748 Clic4 Intron
Rr601952 1600 bp distal
SNP C/T T C
rs219448450
MGI SNP Detail
Alliance Variant
Chr4:134948751 Clic4 Intron
Rr601952 1603 bp distal
SNP A/T A T
rs27608460
MGI SNP Detail
Alliance Variant
Chr4:134948758 Clic4 Intron
Rr601952 1610 bp distal
SNP G/T G T T T G T G T
rs27608459
MGI SNP Detail
Alliance Variant
Chr4:134948794 Clic4 Intron
Rr601952 1646 bp distal
SNP A/G A G G G G G G G A A G A G G A A A
rs27608458
MGI SNP Detail
Alliance Variant
Chr4:134948796 Clic4 Intron
Rr601952 1648 bp distal
SNP C/T T T T T T T T T T T T C T
rs255677636
MGI SNP Detail
Alliance Variant
Chr4:134948874 Clic4 Intron
Rr601952 1726 bp distal
SNP C/T T C
rs27608457
MGI SNP Detail
Alliance Variant
Chr4:134948879 Clic4 Intron
Rr601952 1731 bp distal
SNP A/G G G A A G A G G G A G G G
rs27608456
MGI SNP Detail
Alliance Variant
Chr4:134948928 Clic4 Intron
Rr601952 1780 bp distal
Rr601953 within coordinates of
SNP A/C A A A A A A A A A C C A A C A
rs247781924
MGI SNP Detail
Alliance Variant
Chr4:134948965 Clic4 Intron
Rr601952 1817 bp distal
Rr601953 within coordinates of
SNP A/G G A
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Showing SNP(s) 1 - 73 of 73

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory