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Mouse SNP Summary
Symbol
Name
ID
Rr602055
regulatory region 602055
MGI:8064187

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Showing SNP(s) 1 - 100 of 123

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259993554
MGI SNP Detail
Alliance Variant
Chr4:135243268 Rr602055 1967 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227364885
MGI SNP Detail
Alliance Variant
Chr4:135243270 Rr602055 1965 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27604812
MGI SNP Detail
Alliance Variant
Chr4:135243284 Rr602055 1951 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G G G G
rs27604811
MGI SNP Detail
Alliance Variant
Chr4:135243289 Rr602055 1946 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G A A G G A G
rs27604810
MGI SNP Detail
Alliance Variant
Chr4:135243324 Rr602055 1911 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G A G G G A G
rs27604809
MGI SNP Detail
Alliance Variant
Chr4:135243403 Rr602055 1832 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T C C T T C T
rs252345867
MGI SNP Detail
Alliance Variant
Chr4:135243414 Rr602055 1821 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217190778
MGI SNP Detail
Alliance Variant
Chr4:135243443 Rr602055 1792 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579999941
MGI SNP Detail
Alliance Variant
Chr4:135243494 Rr602055 1741 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T C T T T T T T C C T T T T T C T T C C T T T C C T T T C T T T C T T T T T T C C T T C C T T T
rs27604808
MGI SNP Detail
Alliance Variant
Chr4:135243503 Rr602055 1732 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A G A A G A
rs245732575
MGI SNP Detail
Alliance Variant
Chr4:135243640 Rr602055 1595 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T G G G G G T G G G G G G T T G G G G G T G G T T G G G T T G G G G G G G G T G G G G G G T T G G G T G G G
rs214887248
MGI SNP Detail
Alliance Variant
Chr4:135243652 Rr602055 1583 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T C T T T T T T C C T T T T T T T T C C T T T C C T T T T C T T T C T T T T T T C C T T C C T T T
rs238658211
MGI SNP Detail
Alliance Variant
Chr4:135243653 Rr602055 1582 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258247791
MGI SNP Detail
Alliance Variant
Chr4:135243661 Rr602055 1574 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T T T T T T G T T T T T T G G T T T T T G T T G G T T T G G T T T T G T T T G T T T T T T G G T T T G T T T
rs222601939
MGI SNP Detail
Alliance Variant
Chr4:135243672 Rr602055 1563 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T T T T T T G T T T T T T G G T T T T T T T T G G T T T G G T T T T T T T T G T T T T T T G G T T G G T T T
rs235707709
MGI SNP Detail
Alliance Variant
Chr4:135243685 Rr602055 1550 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249884763
MGI SNP Detail
Alliance Variant
Chr4:135243689 Rr602055 1546 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A G A A A A A A G G A A A A A A A A G G A A A G G A A A A A A A A G A A A A A A G G A A A G A A A
rs223668781
MGI SNP Detail
Alliance Variant
Chr4:135243690 Rr602055 1545 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242173608
MGI SNP Detail
Alliance Variant
Chr4:135243777 Rr602055 1458 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G A G G G G G G A A G G G G G A G G A A G G G A A G G G G A G G G A G G G G G G A A G G G A G G G
rs260065203
MGI SNP Detail
Alliance Variant
Chr4:135243783 Rr602055 1452 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G A G G G G G G A A G G G G G G G G A A G G G A A G G G G G G G G A G G G G G G A A G G G A G G G
rs27604807
MGI SNP Detail
Alliance Variant
Chr4:135243786 Rr602055 1449 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C C C
rs246936121
MGI SNP Detail
Alliance Variant
Chr4:135243797 Rr602053 within coordinates of
Rr602055 1438 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C T C C C C C C T T C C C C C C C C T T C C C T T C C C C C C C C T C C C C C C T T C C C T C C C
rs27604806
MGI SNP Detail
Alliance Variant
Chr4:135243818 Rr602053 within coordinates of
Rr602055 1417 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T T T
rs229188624
MGI SNP Detail
Alliance Variant
Chr4:135243834 Rr602053 within coordinates of
Rr602055 1401 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242238258
MGI SNP Detail
Alliance Variant
Chr4:135243871 Rr602053 within coordinates of
Rr602055 1364 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27604805
MGI SNP Detail
Alliance Variant
Chr4:135243873 Rr602053 within coordinates of
Rr602055 1362 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T C T T C T
rs27604804
MGI SNP Detail
Alliance Variant
Chr4:135243884 Rr602053 within coordinates of
Rr602055 1351 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T C T T T C T
rs27604803
MGI SNP Detail
Alliance Variant
Chr4:135243944 Rr602053 within coordinates of
Rr602055 1291 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A T A A A T A
rs214951343
MGI SNP Detail
Alliance Variant
Chr4:135243977 Rr602053 within coordinates of
Rr602055 1258 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27604802
MGI SNP Detail
Alliance Variant
Chr4:135244043 Rr602053 within coordinates of
Rr602055 1192 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C T T C C T C
rs254823699
MGI SNP Detail
Alliance Variant
Chr4:135244063 Rr602053 within coordinates of
Rr602055 1172 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27604801
MGI SNP Detail
Alliance Variant
Chr4:135244088 Rr602053 within coordinates of
Rr602055 1147 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T C C T T C T
rs27604800
MGI SNP Detail
Alliance Variant
Chr4:135244133 Rr602053 within coordinates of
Rr602055 1102 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T G G G G G G T G G T T G G T G
rs27604799
MGI SNP Detail
Alliance Variant
Chr4:135244174 Rr602053 within coordinates of
Rr602055 1061 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T T T
rs27604798
MGI SNP Detail
Alliance Variant
Chr4:135244204 Rr602053 within coordinates of
Rr602055 1031 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/T T T T T T T A T T A T T A T
rs235787773
MGI SNP Detail
Alliance Variant
Chr4:135244262 Rr602053 within coordinates of
Rr602055 973 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253794292
MGI SNP Detail
Alliance Variant
Chr4:135244276 Rr602053 within coordinates of
Rr602055 959 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T G G G G G T G G G G G G T T G G G G G T G G T T G G G T T G G G G T G G G T G G G G G G T T G G T T G G G
rs224391909
MGI SNP Detail
Alliance Variant
Chr4:135244283 Rr602053 within coordinates of
Rr602055 952 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs244258798
MGI SNP Detail
Alliance Variant
Chr4:135244297 Rr602053 within coordinates of
Rr602055 938 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262056290
MGI SNP Detail
Alliance Variant
Chr4:135244336 Rr602053 within coordinates of
Rr602055 899 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221571600
MGI SNP Detail
Alliance Variant
Chr4:135244353 Rr602053 within coordinates of
Rr602055 882 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C T C C C C C C T T C C C C C T C C T T C C C T T C C C C C C C C T C C C C C C T T C C T T C C C
rs259803125
MGI SNP Detail
Alliance Variant
Chr4:135244380 Rr602053 within coordinates of
Rr602055 855 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228277842
MGI SNP Detail
Alliance Variant
Chr4:135244419 Rr602053 within coordinates of
Rr602054 within coordinates of
Rr602055 816 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs239878906
MGI SNP Detail
Alliance Variant
Chr4:135244523 Rr602053 within coordinates of
Rr602055 712 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263083938
MGI SNP Detail
Alliance Variant
Chr4:135244622 Rr602053 within coordinates of
Rr602055 613 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230894868
MGI SNP Detail
Alliance Variant
Chr4:135244640 Rr602053 within coordinates of
Rr602055 595 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250425196
MGI SNP Detail
Alliance Variant
Chr4:135244675 Rr602053 within coordinates of
Rr602055 560 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs212856817
MGI SNP Detail
Alliance Variant
Chr4:135244678 Rr602053 within coordinates of
Rr602055 557 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27604797
MGI SNP Detail
Alliance Variant
Chr4:135244689 Rr602053 within coordinates of
Rr602055 546 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A T A A T
rs243898428
MGI SNP Detail
Alliance Variant
Chr4:135244730 Rr602055 505 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217756683
MGI SNP Detail
Alliance Variant
Chr4:135244841 Rr602055 394 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs27604796
MGI SNP Detail
Alliance Variant
Chr4:135244849 Rr602055 386 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T C T T C T
rs27604795
MGI SNP Detail
Alliance Variant
Chr4:135244949 Rr602055 286 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T T T T T T T G T T G T T T G T
rs586437271
MGI SNP Detail
Alliance Variant
Chr4:135244953 Rr602055 282 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215983284
MGI SNP Detail
Alliance Variant
Chr4:135244988 Rr602055 247 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G A G G G G G G A A G G G G G A G G A A G G G A A G G G G A G G G A G G G G G G A A G G G A G G G
rs239191877
MGI SNP Detail
Alliance Variant
Chr4:135244990 Rr602055 245 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G A G G G G G G A A G G G G G A G G A A G G G A A G G G G G G G G A G G G G G G A A G G G A G G G
rs257209473
MGI SNP Detail
Alliance Variant
Chr4:135244991 Rr602055 244 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T C T T T T T T C C T T T T T C T T C C T T T C C T T T T C T T T C T T T T T T C C T T C C T T T
rs221205214
MGI SNP Detail
Alliance Variant
Chr4:135245013 Rr602055 222 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs235919651
MGI SNP Detail
Alliance Variant
Chr4:135245036 Rr602055 199 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T C T T T T T T C C T T T T T C T T C C T T T C C T T T T C T T T C T T T T T T C C T T C C T T T
rs253190237
MGI SNP Detail
Alliance Variant
Chr4:135245038 Rr602055 197 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs221926483
MGI SNP Detail
Alliance Variant
Chr4:135245066 Rr602055 169 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27604794
MGI SNP Detail
Alliance Variant
Chr4:135245070 Rr602055 165 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/C A C A C C A A C A A A A A A A A
rs27604793
MGI SNP Detail
Alliance Variant
Chr4:135245079 Rr602055 156 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T
rs230741995
MGI SNP Detail
Alliance Variant
Chr4:135245080 Rr602055 155 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245714053
MGI SNP Detail
Alliance Variant
Chr4:135245085 Rr602055 150 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T C T T T T T T C C T T T T T C T T C C T T T C C T T T T C T T T C T T T T T T C C T T C C T T T
rs261810812
MGI SNP Detail
Alliance Variant
Chr4:135245090 Rr602055 145 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27604792
MGI SNP Detail
Alliance Variant
Chr4:135245174 Rr602055 61 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A C A A A C A
rs27604791
MGI SNP Detail
Alliance Variant
Chr4:135245196 Rr602055 39 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/C A A A A A A C A A C A A C A
rs217814113
MGI SNP Detail
Alliance Variant
Chr4:135245208 Rr602055 27 bp proximal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs27604790
MGI SNP Detail
Alliance Variant
Chr4:135245246 Rr602055 within coordinates of
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A A A A A A
rs253479909
MGI SNP Detail
Alliance Variant
Chr4:135245355 Rr602055 99 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216522708
MGI SNP Detail
Alliance Variant
Chr4:135245387 Rr602055 131 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27604789
MGI SNP Detail
Alliance Variant
Chr4:135245402 Rr602055 146 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T C T T C T
rs255504821
MGI SNP Detail
Alliance Variant
Chr4:135245492 Rr602055 236 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212987132
MGI SNP Detail
Alliance Variant
Chr4:135245509 Rr602055 253 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T C T T T T T T C C T T T T T T T T C C T T T C C T T T T C T T T C T T T T T T C C T T C C T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230098626
MGI SNP Detail
Alliance Variant
Chr4:135245510 Rr602055 254 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs253245421
MGI SNP Detail
Alliance Variant
Chr4:135245555 Rr602055 299 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27604788
MGI SNP Detail
Alliance Variant
Chr4:135245692 Rr602055 436 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C T C C T C
rs27604787
MGI SNP Detail
Alliance Variant
Chr4:135245720 Rr602055 464 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T T T
rs258582807
MGI SNP Detail
Alliance Variant
Chr4:135245739 Rr602055 483 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223011749
MGI SNP Detail
Alliance Variant
Chr4:135245935 Rr602055 679 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/C A A A A A C A A A A A A C C A A A A A C A A C C A A A C C A A A A C A A A C A A A A A A C C A C C A A A
rs579681414
MGI SNP Detail
Alliance Variant
Chr4:135245967 Rr602055 711 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242947684
MGI SNP Detail
Alliance Variant
Chr4:135245971 Rr602055 715 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264811855
MGI SNP Detail
Alliance Variant
Chr4:135245977 Rr602055 721 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217943402
MGI SNP Detail
Alliance Variant
Chr4:135245997 Rr602055 741 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27604786
MGI SNP Detail
Alliance Variant
Chr4:135246018 Rr602055 762 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A C A A C A
rs260371301
MGI SNP Detail
Alliance Variant
Chr4:135246025 Rr602055 769 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227780644
MGI SNP Detail
Alliance Variant
Chr4:135246028 Rr602055 772 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258745807
MGI SNP Detail
Alliance Variant
Chr4:135246033 Rr602055 777 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27604785
MGI SNP Detail
Alliance Variant
Chr4:135246043 Rr602055 787 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T C C T T C T
rs231535673
MGI SNP Detail
Alliance Variant
Chr4:135246058 Rr602055 802 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250966401
MGI SNP Detail
Alliance Variant
Chr4:135246087 Rr602055 831 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213110790
MGI SNP Detail
Alliance Variant
Chr4:135246111 Rr602055 855 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27604784
MGI SNP Detail
Alliance Variant
Chr4:135246123 Rr602055 867 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C T C C C C
rs247572071
MGI SNP Detail
Alliance Variant
Chr4:135246157 Rr602055 901 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27604783
MGI SNP Detail
Alliance Variant
Chr4:135246190 Rr602055 934 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T C T T C T
rs238720042
MGI SNP Detail
Alliance Variant
Chr4:135246196 Rr602055 940 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G A A A A A G A A A A A A G G A A A A A G A A G G A A A G G A A A A G A A A G A A A A A A G G A A G G A A A
rs262899551
MGI SNP Detail
Alliance Variant
Chr4:135246237 Rr602055 981 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223343565
MGI SNP Detail
Alliance Variant
Chr4:135246331 Rr602055 1075 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237953529
MGI SNP Detail
Alliance Variant
Chr4:135246468 Rr602055 1212 bp distal
Stpg1 Intron
Stpg1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 123

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory