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Mouse SNP Summary
Symbol
Name
ID 		Rr602230
regulatory region 602230
MGI:8064362

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Showing SNP(s) 1 - 100 of 130

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228226263
MGI SNP Detail
Alliance Variant		 Chr4:135706936 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1911 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G
rs245269744
MGI SNP Detail
Alliance Variant		 Chr4:135706949 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1898 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs214724195
MGI SNP Detail
Alliance Variant		 Chr4:135706977 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1870 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C
rs235070592
MGI SNP Detail
Alliance Variant		 Chr4:135707053 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1794 bp proximal
 SNP A/G G A A G A A A A A A G G A A A A A G A A G G A A A G G A A G A A A G A A A A A A A A A G A A A A
rs32459716
MGI SNP Detail
Alliance Variant		 Chr4:135707063 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1784 bp proximal
 SNP A/G A G G G
rs212531297
MGI SNP Detail
Alliance Variant		 Chr4:135707091 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1756 bp proximal
 SNP A/G G G A G G G G G G A G G G G G A G G A A G G G G G G G G G G G G G G G G G G G G G G
rs241804263
MGI SNP Detail
Alliance Variant		 Chr4:135707102 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1745 bp proximal
 SNP C/T T T C T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T
rs583007221
MGI SNP Detail
Alliance Variant		 Chr4:135707119 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1728 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253044039
MGI SNP Detail
Alliance Variant		 Chr4:135707123 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1724 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586517902
MGI SNP Detail
Alliance Variant		 Chr4:135707148 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1699 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580368838
MGI SNP Detail
Alliance Variant		 Chr4:135707159 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1688 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220554850
MGI SNP Detail
Alliance Variant		 Chr4:135707162 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1685 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239857882
MGI SNP Detail
Alliance Variant		 Chr4:135707172 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1675 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48915942
MGI SNP Detail
Alliance Variant		 Chr4:135707186 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1661 bp proximal
 SNP C C C C
rs223085088
MGI SNP Detail
Alliance Variant		 Chr4:135707192 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1655 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241197176
MGI SNP Detail
Alliance Variant		 Chr4:135707193 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1654 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264878993
MGI SNP Detail
Alliance Variant		 Chr4:135707228 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1619 bp proximal
 SNP A/G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A
rs583580059
MGI SNP Detail
Alliance Variant		 Chr4:135707268 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1579 bp proximal
 SNP A/G A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A
rs587170817
MGI SNP Detail
Alliance Variant		 Chr4:135707274 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1573 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T
rs579944050
MGI SNP Detail
Alliance Variant		 Chr4:135707276 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1571 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C
rs233231357
MGI SNP Detail
Alliance Variant		 Chr4:135707311 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1536 bp proximal
 SNP A/T A A T T A T T T T T T A A T T T T T T T T T A T T T A A T A T A T T T A T T T T T T T A T T T T T T T
rs251440534
MGI SNP Detail
Alliance Variant		 Chr4:135707318 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1529 bp proximal
 SNP C/T T T C C T C C C C C C T T C C C C C C C C T T C C C T T C T C T C C C T C C C C C C C T C C C C C C C
rs259257510
MGI SNP Detail
Alliance Variant		 Chr4:135707319 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1528 bp proximal
 SNP A/G G G A A G A A A A A A G G A A A A A G A A G G A A A G G A G A G A A A G A A A A A A A G A A G A A A A
rs228206677
MGI SNP Detail
Alliance Variant		 Chr4:135707335 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1512 bp proximal
 SNP C/T T T C C T C C C C C C T T C C C C C C C C T T C C C T T C T C T C C C T C C C C C C C T C C C C C C C
rs245231216
MGI SNP Detail
Alliance Variant		 Chr4:135707355 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1492 bp proximal
 SNP A/G G G G A A G A A A A A A G G A A A A A G A A G G A A A G G A G A G A A A G A A A A A A A G A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228713534
MGI SNP Detail
Alliance Variant		 Chr4:135707483 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1364 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250308349
MGI SNP Detail
Alliance Variant		 Chr4:135707512 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1335 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583345642
MGI SNP Detail
Alliance Variant		 Chr4:135707558 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1289 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586822857
MGI SNP Detail
Alliance Variant		 Chr4:135707593 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1254 bp proximal
 SNP A/G A G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G
rs580836362
MGI SNP Detail
Alliance Variant		 Chr4:135707597 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1250 bp proximal
 SNP G/T G T T T T T T T T G T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T
rs584263805
MGI SNP Detail
Alliance Variant		 Chr4:135707630 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1217 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs587528322
MGI SNP Detail
Alliance Variant		 Chr4:135707638 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1209 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212846995
MGI SNP Detail
Alliance Variant		 Chr4:135707654 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1193 bp proximal
 SNP C/G C G G C G C C G G C G C
rs239113613
MGI SNP Detail
Alliance Variant		 Chr4:135707681 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1166 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27620013
MGI SNP Detail
Alliance Variant		 Chr4:135707697 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1150 bp proximal
 SNP C/T T C C C C C C C C C C C C
rs214942823
MGI SNP Detail
Alliance Variant		 Chr4:135707728 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1119 bp proximal
 SNP A/G A A G G A G G G G G G A A G G G G G A G G A A G G G A A A G A G A G G G A G G G G G G G A G G A G G G G
rs233401135
MGI SNP Detail
Alliance Variant		 Chr4:135707730 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1117 bp proximal
 SNP G/T G G T T G T T T T T T G G T T T T T G T T G G T T T G G G T G T G T T T G T T T T T T T G T T T T T T T
rs249556244
MGI SNP Detail
Alliance Variant		 Chr4:135707763 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1084 bp proximal
 SNP C/T C C C T T C T T T T T T C C T T T T T C T T C C T T T C C T C T C T T T C T T T T T T T C T T C T T T T
rs223290470
MGI SNP Detail
Alliance Variant		 Chr4:135707798 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1049 bp proximal
 SNP A/G A A A G G A G G G G G G A A G G G G G G G G A A G G G A A G A G A G G G A G G G G G G G A G G G G G G G
rs236191092
MGI SNP Detail
Alliance Variant		 Chr4:135707820 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 1027 bp proximal
 SNP A/G G G G A A G A A A A A A G G A A A A A A A A G G A A A G G A G A G A A A G A A A A A A A G A A A A A A A
rs49403868
MGI SNP Detail
Alliance Variant		 Chr4:135707854 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 993 bp proximal
 SNP G G
rs226180403
MGI SNP Detail
Alliance Variant		 Chr4:135707855 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 992 bp proximal
 SNP A/G A A G G A G G G G G G A A G G G G G A G G A A G G G A A G A G A G G G A G G G G G G G A G G G G G G G
rs242804230
MGI SNP Detail
Alliance Variant		 Chr4:135707856 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 991 bp proximal
 SNP C/T C C T T C T T T T T T C C T T T T T T T T C C T T T C C C T C T C T T T C T T T T T T T C T T T T T T T
rs108512625
MGI SNP Detail
Alliance Variant		 Chr4:135707870 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 977 bp proximal
 SNP C/T T C C
rs259184224
MGI SNP Detail
Alliance Variant		 Chr4:135707889 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 958 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582226554
MGI SNP Detail
Alliance Variant		 Chr4:135707940 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 907 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48742999
MGI SNP Detail
Alliance Variant		 Chr4:135707965 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 882 bp proximal
 SNP A/T A T T
rs239109999
MGI SNP Detail
Alliance Variant		 Chr4:135707982 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 865 bp proximal
 SNP C/T C C C T T C T T T T T T C C T T T T T T T T C C T T T C C T C T C T T T C T T T T T T T C T T T T T T T
rs265359136
MGI SNP Detail
Alliance Variant		 Chr4:135708011 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 836 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228063932
MGI SNP Detail
Alliance Variant		 Chr4:135708024 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 823 bp proximal
 SNP A/C/G G G G C C G C C C C C C G G C C C C C C C C C G C C C G G C G C G C C C G C C C C C C C G C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578613037
MGI SNP Detail
Alliance Variant		 Chr4:135708064 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 783 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254536474
MGI SNP Detail
Alliance Variant		 Chr4:135708107 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 740 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264188931
MGI SNP Detail
Alliance Variant		 Chr4:135708144 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 703 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27620012
MGI SNP Detail
Alliance Variant		 Chr4:135708155 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 692 bp proximal
 SNP A/G G A A A A A A G A A G A
rs27620011
MGI SNP Detail
Alliance Variant		 Chr4:135708189 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 658 bp proximal
 SNP C/T C T T T T T T T T T C T
rs214916385
MGI SNP Detail
Alliance Variant		 Chr4:135708212 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 635 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48635899
MGI SNP Detail
Alliance Variant		 Chr4:135708234 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 613 bp proximal
 SNP C/T T C C
rs243656992
MGI SNP Detail
Alliance Variant		 Chr4:135708334 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 513 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214878816
MGI SNP Detail
Alliance Variant		 Chr4:135708338 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 509 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234511089
MGI SNP Detail
Alliance Variant		 Chr4:135708372 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 475 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261462782
MGI SNP Detail
Alliance Variant		 Chr4:135708438 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 409 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225706439
MGI SNP Detail
Alliance Variant		 Chr4:135708460 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 387 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236383255
MGI SNP Detail
Alliance Variant		 Chr4:135708467 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 380 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252894835
MGI SNP Detail
Alliance Variant		 Chr4:135708485 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 362 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221988622
MGI SNP Detail
Alliance Variant		 Chr4:135708523 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 324 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239070614
MGI SNP Detail
Alliance Variant		 Chr4:135708537 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 310 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262838117
MGI SNP Detail
Alliance Variant		 Chr4:135708617 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 230 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48477759
MGI SNP Detail
Alliance Variant		 Chr4:135708618 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 229 bp proximal
 SNP G/T G T T
rs51085385
MGI SNP Detail
Alliance Variant		 Chr4:135708690 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 157 bp proximal
 SNP A/T A T T
rs266003225
MGI SNP Detail
Alliance Variant		 Chr4:135708698 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 149 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs45789594
MGI SNP Detail
Alliance Variant		 Chr4:135708751 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 96 bp proximal
 SNP C/T C T T
rs245636078
MGI SNP Detail
Alliance Variant		 Chr4:135708756 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 91 bp proximal
 SNP C/T T T C C T C C C C C C T T C C C C C C C T T C C C T T C T C C C C T C C C C C C C T C C T C C C C
rs256859231
MGI SNP Detail
Alliance Variant		 Chr4:135708757 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 90 bp proximal
 SNP A/G G G A A G A A A A A A G G A A A A A A A G G A A A G G A G A A A A G A A A A A A A G A A G A A A A
rs227231040
MGI SNP Detail
Alliance Variant		 Chr4:135708761 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 86 bp proximal
 SNP A/C A A C C A C C C C C C A A C C C C C C C A A C C C A A C A C C C C A C C C C C C C A C C A C C C C
rs50639280
MGI SNP Detail
Alliance Variant		 Chr4:135708771 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 76 bp proximal
 SNP A/G G A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582004159
MGI SNP Detail
Alliance Variant		 Chr4:135708784 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 63 bp proximal
 SNP C/T T C C T C C C C C C T C C C C C C C T C C C T C C C C C T C C C C C C C C C T C C C C
rs214463392
MGI SNP Detail
Alliance Variant		 Chr4:135708827 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 20 bp proximal
 SNP G/T G G T T G T T T T T T G G T T T T T G T T G G T T T G G T G T G T T T G T T T T T T T G T T G T T T T
rs48762212
MGI SNP Detail
Alliance Variant		 Chr4:135708876 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 8 bp distal
 SNP C C C
rs249741004
MGI SNP Detail
Alliance Variant		 Chr4:135708882 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 14 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52551488
MGI SNP Detail
Alliance Variant		 Chr4:135708883 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 15 bp distal
 SNP T T T
rs50507310
MGI SNP Detail
Alliance Variant		 Chr4:135708917 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 49 bp distal
 SNP T T T
rs47378527
MGI SNP Detail
Alliance Variant		 Chr4:135708919 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 51 bp distal
 SNP T T T
rs252854860
MGI SNP Detail
Alliance Variant		 Chr4:135708928 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 60 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49788975
MGI SNP Detail
Alliance Variant		 Chr4:135708992 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 124 bp distal
 SNP A/G A G G
rs231768978
MGI SNP Detail
Alliance Variant		 Chr4:135709130 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 262 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48412783
MGI SNP Detail
Alliance Variant		 Chr4:135709138 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 270 bp distal
 SNP A/G G A A
rs46475043
MGI SNP Detail
Alliance Variant		 Chr4:135709295 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 427 bp distal
 SNP C/T C T T
rs51564772
MGI SNP Detail
Alliance Variant		 Chr4:135709309 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 441 bp distal
 SNP A/C C A A
rs47191386
MGI SNP Detail
Alliance Variant		 Chr4:135709314 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 446 bp distal
 SNP G G G
rs46312536
MGI SNP Detail
Alliance Variant		 Chr4:135709336 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 468 bp distal
 SNP C/T T C C
rs223032877
MGI SNP Detail
Alliance Variant		 Chr4:135709337 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 469 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239507613
MGI SNP Detail
Alliance Variant		 Chr4:135709338 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 470 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs49387043
MGI SNP Detail
Alliance Variant		 Chr4:135709365 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 497 bp distal
 SNP C/T C T T
rs225722886
MGI SNP Detail
Alliance Variant		 Chr4:135709396 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 528 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242718161
MGI SNP Detail
Alliance Variant		 Chr4:135709407 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 539 bp distal
 SNP C/G G G G C C G C C C C C C G G C C C C C C C C C G C C C G G C C G C G C C C G C C C C C C C G C C C C C C C
rs51148001
MGI SNP Detail
Alliance Variant		 Chr4:135709480 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 612 bp distal
 SNP C/T C T C C C
rs227391667
MGI SNP Detail
Alliance Variant		 Chr4:135709576 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 708 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs253894430
MGI SNP Detail
Alliance Variant		 Chr4:135709665 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 797 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216565835
MGI SNP Detail
Alliance Variant		 Chr4:135709693 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 825 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229072276
MGI SNP Detail
Alliance Variant		 Chr4:135709849 Gm69125 within coordinates of
Pithd1 Intron
Pithd1 Noncoding-Transcript-Variant
Rr602230 981 bp distal
 SNP A/T T A A T A A A A A A T A A A A A A A A A T A A A A T A A T A A A A A T A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 100 of 130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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