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Mouse SNP Summary
Symbol
Name
ID 		Rr603557
regulatory region 603557
MGI:8065689

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Showing SNP(s) 1 - 100 of 104

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs28291578
MGI SNP Detail
Alliance Variant		 Chr4:140541405 Gm13032 within coordinates of
Padi1 mRNA-UTR
Rr603557 1452 bp proximal
 SNP A/G G G G G G G G G A G G A G G G
rs28291577
MGI SNP Detail
Alliance Variant		 Chr4:140541421 Gm13032 within coordinates of
Padi1 mRNA-UTR
Rr603557 1436 bp proximal
 SNP A/T T T T T T T T T T T A T T T T
rs28291576
MGI SNP Detail
Alliance Variant		 Chr4:140541443 Gm13032 within coordinates of
Padi1 mRNA-UTR
Rr603557 1414 bp proximal
 SNP C/T T C T T T C C T T T T T C T T
rs28291575
MGI SNP Detail
Alliance Variant		 Chr4:140541449 Gm13032 within coordinates of
Padi1 mRNA-UTR
Rr603557 1408 bp proximal
Tssr44282 within coordinates of
 SNP A/G A A A A A A A A A G A A A A A
rs28291574
MGI SNP Detail
Alliance Variant		 Chr4:140541516 Gm13032 within coordinates of
Padi1 mRNA-UTR
Rr603557 1341 bp proximal
 SNP A/T T A T T T A A T T T A T A T T
rs28291573
MGI SNP Detail
Alliance Variant		 Chr4:140541667 Gm13032 within coordinates of
Padi1 mRNA-UTR
Rr603557 1190 bp proximal
 SNP A/G G G G G G G A G G G G G G G
rs28291572
MGI SNP Detail
Alliance Variant		 Chr4:140542115 Cpgi15197 within coordinates of
Gm13032 within coordinates of
Padi1 Coding-Synonymous
Rr603557 742 bp proximal
 SNP A/G G G G G G G G G G A G G G G
rs28291571
MGI SNP Detail
Alliance Variant		 Chr4:140542199 Cpgi15197 within coordinates of
Gm13032 within coordinates of
Padi1 Intron
Rr603557 658 bp proximal
 SNP C/G G G C G G G C G G G G G C G
rs28291570
MGI SNP Detail
Alliance Variant		 Chr4:140542274 Gm13032 within coordinates of
Padi1 Intron
Rr603557 583 bp proximal
 SNP A/T A A T A A A T A A A T A T A A
rs32756874
MGI SNP Detail
Alliance Variant		 Chr4:140542295 Gm13032 within coordinates of
Padi1 Intron
Rr603557 562 bp proximal
 SNP G/T G T G
rs47960897
MGI SNP Detail
Alliance Variant		 Chr4:140542408 Gm13032 within coordinates of
Padi1 Intron
Rr603557 449 bp proximal
 SNP C/T C T
rs46277181
MGI SNP Detail
Alliance Variant		 Chr4:140542422 Gm13032 within coordinates of
Padi1 Intron
Rr603557 435 bp proximal
 SNP C/T T C
rs28291569
MGI SNP Detail
Alliance Variant		 Chr4:140542454 Gm13032 within coordinates of
Padi1 Intron
Rr603557 403 bp proximal
 SNP C/G G G G G G C G G G
rs28291568
MGI SNP Detail
Alliance Variant		 Chr4:140542461 Gm13032 within coordinates of
Padi1 Intron
Rr603557 396 bp proximal
 SNP A/C C A C C A C C C A C A C C
rs45848489
MGI SNP Detail
Alliance Variant		 Chr4:140542462 Gm13032 within coordinates of
Padi1 Intron
Rr603557 395 bp proximal
 SNP T T
rs28291567
MGI SNP Detail
Alliance Variant		 Chr4:140542490 Gm13032 within coordinates of
Padi1 Intron
Rr603557 367 bp proximal
 SNP C/T T T C C C T C C C C C C C C C
rs52259689
MGI SNP Detail
Alliance Variant		 Chr4:140542907 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C C
rs52082399
MGI SNP Detail
Alliance Variant		 Chr4:140542939 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP T T
rs49556489
MGI SNP Detail
Alliance Variant		 Chr4:140543003 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP G G G
rs28291566
MGI SNP Detail
Alliance Variant		 Chr4:140543033 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T T T C C C C C C C C C C C C
rs28291565
MGI SNP Detail
Alliance Variant		 Chr4:140543194 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/C A A A A A A A C A A A A
rs28291564
MGI SNP Detail
Alliance Variant		 Chr4:140543211 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/G A A A A A A A A A G A A A A
rs51265007
MGI SNP Detail
Alliance Variant		 Chr4:140543242 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/G A G
rs28291563
MGI SNP Detail
Alliance Variant		 Chr4:140543336 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T C T C T C C C C T T C
rs52074304
MGI SNP Detail
Alliance Variant		 Chr4:140543350 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs32722337
MGI SNP Detail
Alliance Variant		 Chr4:140543570 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/G A A G A
rs28291562
MGI SNP Detail
Alliance Variant		 Chr4:140543656 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/C A A C A A C C A A A A C A A
rs32075021
MGI SNP Detail
Alliance Variant		 Chr4:140543675 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/G A A G
rs32605025
MGI SNP Detail
Alliance Variant		 Chr4:140543746 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP G/T T T G
rs48887123
MGI SNP Detail
Alliance Variant		 Chr4:140543758 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP T T
rs28291561
MGI SNP Detail
Alliance Variant		 Chr4:140543804 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T T T C T T T C C T T T T C T T
rs28291560
MGI SNP Detail
Alliance Variant		 Chr4:140544020 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T C C T C T C C T C T C
rs28291559
MGI SNP Detail
Alliance Variant		 Chr4:140544043 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/G G A G G A G G A G G
rs28291558
MGI SNP Detail
Alliance Variant		 Chr4:140544090 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/G G G A G G G A G G G G G A G
rs28291557
MGI SNP Detail
Alliance Variant		 Chr4:140544105 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T C C T C C C T C C C C C T C C
rs28291556
MGI SNP Detail
Alliance Variant		 Chr4:140544220 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/C A A C C C A C C C C C C C C C
rs48106464
MGI SNP Detail
Alliance Variant		 Chr4:140544267 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T C T C
rs28291555
MGI SNP Detail
Alliance Variant		 Chr4:140544278 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/G G A A G G A G
rs45846509
MGI SNP Detail
Alliance Variant		 Chr4:140544304 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T T C T
rs28291554
MGI SNP Detail
Alliance Variant		 Chr4:140544337 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T T C T T C T T C T C T
rs51883146
MGI SNP Detail
Alliance Variant		 Chr4:140544343 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP C/T T C C
rs46608289
MGI SNP Detail
Alliance Variant		 Chr4:140544344 Gm13032 within coordinates of
Padi1 Intron
Rr603557 within coordinates of
 SNP A/G G G A
rs28291553
MGI SNP Detail
Alliance Variant		 Chr4:140544591 Gm13032 within coordinates of
Padi1 Intron
Rr603557 186 bp distal
 SNP A/G G G G G G G G A G G A G G G
rs51595618
MGI SNP Detail
Alliance Variant		 Chr4:140544623 Gm13032 within coordinates of
Padi1 Intron
Rr603557 218 bp distal
 SNP A/G A G A
rs107751390
MGI SNP Detail
Alliance Variant		 Chr4:140544632 Gm13032 within coordinates of
Padi1 Intron
Rr603557 227 bp distal
 SNP C/T T C
rs47425369
MGI SNP Detail
Alliance Variant		 Chr4:140544666 Gm13032 within coordinates of
Padi1 Intron
Rr603557 261 bp distal
 SNP A/G A G A
rs28291552
MGI SNP Detail
Alliance Variant		 Chr4:140544696 Gm13032 within coordinates of
Padi1 Intron
Rr603557 291 bp distal
 SNP C/T C C C C C C C C C T C C C C
rs28291551
MGI SNP Detail
Alliance Variant		 Chr4:140544715 Gm13032 within coordinates of
Padi1 Intron
Rr603557 310 bp distal
 SNP A/G G G A G G G A G G G G A G G
rs47273084
MGI SNP Detail
Alliance Variant		 Chr4:140544822 Gm13032 within coordinates of
Padi1 Intron
Rr603557 417 bp distal
 SNP G/T T G T
rs107676442
MGI SNP Detail
Alliance Variant		 Chr4:140544849 Padi1 Intron
Rr603557 444 bp distal
 SNP A/G A G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs46635230
MGI SNP Detail
Alliance Variant		 Chr4:140544871 Padi1 Intron
Rr603557 466 bp distal
 SNP C/T C T C
rs48245032
MGI SNP Detail
Alliance Variant		 Chr4:140544884 Padi1 Intron
Rr603557 479 bp distal
 SNP C/T T C
rs51593737
MGI SNP Detail
Alliance Variant		 Chr4:140544885 Padi1 Intron
Rr603557 480 bp distal
 SNP A/G G A
rs107755696
MGI SNP Detail
Alliance Variant		 Chr4:140544901 Padi1 Intron
Rr603557 496 bp distal
Rr603558 within coordinates of
 SNP C/T T C C
rs50854346
MGI SNP Detail
Alliance Variant		 Chr4:140544923 Padi1 Intron
Rr603557 518 bp distal
 SNP A/G G G A
rs51486178
MGI SNP Detail
Alliance Variant		 Chr4:140545018 Padi1 Intron
Rr603557 613 bp distal
 SNP C/T C T
rs51546560
MGI SNP Detail
Alliance Variant		 Chr4:140545041 Padi1 Intron
Rr603557 636 bp distal
 SNP A/G A G
rs51833124
MGI SNP Detail
Alliance Variant		 Chr4:140545065 Padi1 Intron
Rr603557 660 bp distal
 SNP A/G G A
rs50047810
MGI SNP Detail
Alliance Variant		 Chr4:140545081 Padi1 Intron
Rr603557 676 bp distal
 SNP A/G G A
rs47084726
MGI SNP Detail
Alliance Variant		 Chr4:140545087 Padi1 Intron
Rr603557 682 bp distal
 SNP A/T A T
rs28291550
MGI SNP Detail
Alliance Variant		 Chr4:140545132 Padi1 Intron
Rr603557 727 bp distal
 SNP A/G G A A A G A A G A G A
rs48506379
MGI SNP Detail
Alliance Variant		 Chr4:140545134 Padi1 Intron
Rr603557 729 bp distal
 SNP C/T C T
rs48541441
MGI SNP Detail
Alliance Variant		 Chr4:140545207 Padi1 Intron
Rr603557 802 bp distal
 SNP A/G G A
rs51579937
MGI SNP Detail
Alliance Variant		 Chr4:140545208 Padi1 Intron
Rr603557 803 bp distal
 SNP A/T A T
rs28291549
MGI SNP Detail
Alliance Variant		 Chr4:140545219 Padi1 Intron
Rr603557 814 bp distal
 SNP A/G G A G G A G G G A
rs50403480
MGI SNP Detail
Alliance Variant		 Chr4:140545270 Padi1 Intron
Rr603557 865 bp distal
 SNP C/T C T
rs28291548
MGI SNP Detail
Alliance Variant		 Chr4:140545276 Padi1 Intron
Rr603557 871 bp distal
 SNP A/T A A T A
rs28291547
MGI SNP Detail
Alliance Variant		 Chr4:140545282 Padi1 Intron
Rr603557 877 bp distal
 SNP C/T C T T C T C C T
rs51317609
MGI SNP Detail
Alliance Variant		 Chr4:140545283 Padi1 Intron
Rr603557 878 bp distal
 SNP A/G G A
rs28291546
MGI SNP Detail
Alliance Variant		 Chr4:140545298 Padi1 Intron
Rr603557 893 bp distal
 SNP C/T T C T T C T T C
rs28291545
MGI SNP Detail
Alliance Variant		 Chr4:140545382 Padi1 Intron
Rr603557 977 bp distal
 SNP A/G G G G G G G G G G A G G G G
rs28291544
MGI SNP Detail
Alliance Variant		 Chr4:140545392 Padi1 Intron
Rr603557 987 bp distal
 SNP C/T C T C C C T C C C T C T C C
rs28291543
MGI SNP Detail
Alliance Variant		 Chr4:140545421 Padi1 Intron
Rr603557 1016 bp distal
 SNP A/G A G G G A G G G G G G G G G
rs48314484
MGI SNP Detail
Alliance Variant		 Chr4:140545497 Padi1 Intron
Rr603557 1092 bp distal
 SNP C/T T C
rs46289807
MGI SNP Detail
Alliance Variant		 Chr4:140545518 Padi1 Intron
Rr603557 1113 bp distal
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs46740594
MGI SNP Detail
Alliance Variant		 Chr4:140545533 Padi1 Intron
Rr603557 1128 bp distal
 SNP A/G A G
rs28291542
MGI SNP Detail
Alliance Variant		 Chr4:140545611 Padi1 Coding-Synonymous
Rr603557 1206 bp distal
 SNP A/G A A G A G A A A G A G A
rs50341143
MGI SNP Detail
Alliance Variant		 Chr4:140545617 Padi1 Coding-Synonymous
Rr603557 1212 bp distal
 SNP A/G A G A
rs28291541
MGI SNP Detail
Alliance Variant		 Chr4:140545665 Padi1 Coding-Synonymous
Rr603557 1260 bp distal
 SNP C/T T T T T T T T T T C T T T T
rs28291540
MGI SNP Detail
Alliance Variant		 Chr4:140545833 Padi1 Intron
Rr603557 1428 bp distal
 SNP G/T G G G G G G G T G G G G
rs28291539
MGI SNP Detail
Alliance Variant		 Chr4:140545849 Padi1 Intron
Rr603557 1444 bp distal
 SNP A/T T T A A A T A A T A A T A A A
rs28291538
MGI SNP Detail
Alliance Variant		 Chr4:140545866 Padi1 Intron
Rr603557 1461 bp distal
 SNP C/G C C C C C C C C C G C C C C
rs50184829
MGI SNP Detail
Alliance Variant		 Chr4:140545910 Padi1 Intron
Rr603557 1505 bp distal
 SNP C/T C T C
rs28291537
MGI SNP Detail
Alliance Variant		 Chr4:140545931 Padi1 Intron
Rr603557 1526 bp distal
 SNP C/G C G C C C G C C C C G
rs47046158
MGI SNP Detail
Alliance Variant		 Chr4:140545932 Padi1 Intron
Rr603557 1527 bp distal
 SNP A/G G A G
rs50261056
MGI SNP Detail
Alliance Variant		 Chr4:140546034 Padi1 Intron
Rr603557 1629 bp distal
 SNP A/G A G G
rs51943727
MGI SNP Detail
Alliance Variant		 Chr4:140546043 Padi1 Intron
Rr603557 1638 bp distal
 SNP A/G A G A
rs50138037
MGI SNP Detail
Alliance Variant		 Chr4:140546045 Padi1 Intron
Rr603557 1640 bp distal
 SNP C/T T T C
rs46142385
MGI SNP Detail
Alliance Variant		 Chr4:140546055 Padi1 Intron
Rr603557 1650 bp distal
 SNP A/G A A G
rs48239954
MGI SNP Detail
Alliance Variant		 Chr4:140546071 Padi1 Intron
Rr603557 1666 bp distal
 SNP C/G G G C
rs47745699
MGI SNP Detail
Alliance Variant		 Chr4:140546081 Padi1 Intron
Rr603557 1676 bp distal
 SNP C/T C C T
rs47636282
MGI SNP Detail
Alliance Variant		 Chr4:140546097 Padi1 Intron
Rr603557 1692 bp distal
 SNP C/T T T C
rs51785627
MGI SNP Detail
Alliance Variant		 Chr4:140546098 Padi1 Intron
Rr603557 1693 bp distal
 SNP A/G G A
rs28291536
MGI SNP Detail
Alliance Variant		 Chr4:140546163 Padi1 Intron
Rr603557 1758 bp distal
 SNP C/T T T C C T T C T C T T T C C
rs46808234
MGI SNP Detail
Alliance Variant		 Chr4:140546183 Padi1 Coding-Synonymous
Rr603557 1778 bp distal
 SNP C C C
rs46369577
MGI SNP Detail
Alliance Variant		 Chr4:140546189 Padi1 Coding-Synonymous
Rr603557 1784 bp distal
 SNP A/G A A G
rs50698698
MGI SNP Detail
Alliance Variant		 Chr4:140546198 Padi1 Coding-Synonymous
Rr603557 1793 bp distal
 SNP A/G G A
rs51381049
MGI SNP Detail
Alliance Variant		 Chr4:140546252 Padi1 Coding-Synonymous
Rr603557 1847 bp distal
 SNP C/T C T
rs51877532
MGI SNP Detail
Alliance Variant		 Chr4:140546261 Padi1 Coding-Synonymous
Rr603557 1856 bp distal
 SNP C/G G C
rs28291535
MGI SNP Detail
Alliance Variant		 Chr4:140546276 Padi1 Intron
Padi1 Splice-Site
Rr603557 1871 bp distal
 SNP C/T C C C C T C C C C C T C
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Showing SNP(s) 1 - 100 of 104
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory