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Mouse SNP Summary
Symbol
Name
ID
Rr604509
regulatory region 604509
MGI:8066641

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Showing SNP(s) 1 - 33 of 33

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
WSB/EiJ
rs234767118
MGI SNP Detail
Alliance Variant
Chr4:147949216 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 1659 bp proximal
SNP A/C C A
rs252070622
MGI SNP Detail
Alliance Variant
Chr4:147949337 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 1538 bp proximal
SNP T T T
rs33024374
MGI SNP Detail
Alliance Variant
Chr4:147949613 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 1262 bp proximal
SNP C/T C C T T C C C
rs32821329
MGI SNP Detail
Alliance Variant
Chr4:147949625 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 1250 bp proximal
SNP A/G A G G A A A
rs32333128
MGI SNP Detail
Alliance Variant
Chr4:147949745 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 1130 bp proximal
SNP G/T T G G T T T
rs50857525
MGI SNP Detail
Alliance Variant
Chr4:147950239 Miip Coding-NonSynonymous
Miip Noncoding-Transcript-Variant
Rr604509 636 bp proximal
SNP A/G G G A
rs27603696
MGI SNP Detail
Alliance Variant
Chr4:147950317 Miip Coding-NonSynonymous
Miip Noncoding-Transcript-Variant
Rr604509 558 bp proximal
SNP A/C C C A A C C A C A C C C
rs27603695
MGI SNP Detail
Alliance Variant
Chr4:147950344 Miip Coding-NonSynonymous
Miip Noncoding-Transcript-Variant
Rr604509 531 bp proximal
SNP C/T C C T T C C T C T C C
rs49151513
MGI SNP Detail
Alliance Variant
Chr4:147950353 Miip Coding-NonSynonymous
Miip Noncoding-Transcript-Variant
Rr604509 522 bp proximal
SNP A/C A C A A A
rs51170580
MGI SNP Detail
Alliance Variant
Chr4:147950580 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 295 bp proximal
SNP A/G G A G G G
rs27603694
MGI SNP Detail
Alliance Variant
Chr4:147950767 Miip Coding-Synonymous
Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 108 bp proximal
SNP A/G G A A G A G A G G
rs27603693
MGI SNP Detail
Alliance Variant
Chr4:147950830 Miip Intron
Miip mRNA-UTR
Miip Noncoding-Transcript-Variant
Rr604509 45 bp proximal
SNP C/T C C T T C C T C T C C C
rs222276147
MGI SNP Detail
Alliance Variant
Chr4:147950999 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP A A A
rs27603692
MGI SNP Detail
Alliance Variant
Chr4:147951004 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP A/G A G A A G G
rs243032271
MGI SNP Detail
Alliance Variant
Chr4:147951008 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP T T T
rs256139184
MGI SNP Detail
Alliance Variant
Chr4:147951069 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP G G G
rs217983056
MGI SNP Detail
Alliance Variant
Chr4:147951132 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP A/C C A
rs236655638
MGI SNP Detail
Alliance Variant
Chr4:147951176 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP G G G
rs258923845
MGI SNP Detail
Alliance Variant
Chr4:147951225 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP A/G G A
rs213876859
MGI SNP Detail
Alliance Variant
Chr4:147951401 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP A/G G G A G A A A G G G A A A A G G G G G G G G A A A G G G G A G G G G G G G G G G A G G G A G G
rs225073255
MGI SNP Detail
Alliance Variant
Chr4:147951402 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 within coordinates of
SNP G/T G G T G T T T G G G T T T T G G G G G G G G T T T G G G G T G G G G G G G G G G T G G G G G G
rs32047608
MGI SNP Detail
Alliance Variant
Chr4:147951992 Miip Intron
Miip mRNA-UTR
Miip Noncoding-Transcript-Variant
Rr604509 367 bp distal
Rr604510 within coordinates of
SNP A/G A G G A A A
rs32589258
MGI SNP Detail
Alliance Variant
Chr4:147952009 Miip Intron
Miip mRNA-UTR
Miip Noncoding-Transcript-Variant
Rr604509 384 bp distal
Rr604510 within coordinates of
SNP A/G A G G A A A
rs32963138
MGI SNP Detail
Alliance Variant
Chr4:147952254 Miip Intron
Miip mRNA-UTR
Miip Noncoding-Transcript-Variant
Rr604509 629 bp distal
Rr604510 within coordinates of
SNP A/G A G G A A A
rs229913076
MGI SNP Detail
Alliance Variant
Chr4:147952493 Miip Intron
Miip mRNA-UTR
Miip Noncoding-Transcript-Variant
Rr604509 868 bp distal
Rr604510 within coordinates of
SNP C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
WSB/EiJ
rs49808657
MGI SNP Detail
Alliance Variant
Chr4:147952755 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 1130 bp distal
Rr604510 within coordinates of
SNP A/G A G G A
rs48112055
MGI SNP Detail
Alliance Variant
Chr4:147952777 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 1152 bp distal
Rr604510 within coordinates of
SNP A/G G G A
rs32795527
MGI SNP Detail
Alliance Variant
Chr4:147952779 Miip Intron
Miip Noncoding-Transcript-Variant
Rr604509 1154 bp distal
Rr604510 within coordinates of
SNP A/T T A T T
rs6267458
MGI SNP Detail
Alliance Variant
Chr4:147952981 Cpgi15282 within coordinates of
Miip mRNA-UTR
Miip Noncoding-Transcript-Variant
Rr604509 1356 bp distal
Rr604512 within coordinates of
Tssr44551 within coordinates of
SNP C/G C G C C C C
rs6268001
MGI SNP Detail
Alliance Variant
Chr4:147953052 Cpgi15282 within coordinates of
Miip mRNA-UTR
Miip Noncoding-Transcript-Variant
Rr398850 within coordinates of
Rr604509 1427 bp distal
Rr604512 within coordinates of
SNP A/C A C A A A A
rs6268021
MGI SNP Detail
Alliance Variant
Chr4:147953069 Cpgi15282 within coordinates of
Miip mRNA-UTR
Miip Noncoding-Transcript-Variant
Rr398850 within coordinates of
Rr604509 1444 bp distal
Rr604512 within coordinates of
Tssr44552 within coordinates of
SNP A/C A C A A A A
rs6269465
MGI SNP Detail
Chr4:147953325 Cpgi15282 within coordinates of
Rr398850 within coordinates of
Rr604509 1700 bp distal
Rr604512 within coordinates of
Tssr40233 within coordinates of
SNP A/G A A G A G G A
rs27603691
MGI SNP Detail
Chr4:147953404 Cpgi15282 within coordinates of
Rr604509 1779 bp distal
Rr604512 within coordinates of
SNP C/T C C T C T C T C C T C C T C C C C
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Showing SNP(s) 1 - 33 of 33

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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