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Mouse SNP Summary
Symbol
Name
ID 		Rr604528
regulatory region 604528
MGI:8066660

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Showing SNP(s) 1 - 40 of 40

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
C3H/HeJ
C57BL/6J
CZECHII/EiJ
DBA/2J
LG/J
MSM/Ms
SM/J
rs3693792
MGI SNP Detail
Alliance Variant		 Chr4:148020537 Plod1 Intron
Plod1 Noncoding-Transcript-Variant
Rr604528 1977 bp proximal
 SNP A/C A A C A C A A A
rs230655462
MGI SNP Detail
Alliance Variant		 Chr4:148020813 Cpgi15284 within coordinates of
Plod1 Intron
Plod1 Noncoding-Transcript-Variant
Rr604528 1701 bp proximal
 SNP T T T
rs51830181
MGI SNP Detail
Alliance Variant		 Chr4:148020878 Cpgi15284 within coordinates of
Plod1 Intron
Plod1 Noncoding-Transcript-Variant
Rr604528 1636 bp proximal
 SNP A/G A G A A A
rs32062177
MGI SNP Detail
Alliance Variant		 Chr4:148021005 Cpgi15284 within coordinates of
Plod1 Intron
Plod1 Noncoding-Transcript-Variant
Rr604528 1509 bp proximal
 SNP C/T C C C C T
rs13464250
MGI SNP Detail
Alliance Variant		 Chr4:148021087 Cpgi15284 within coordinates of
Plod1 Coding-Synonymous
Plod1 Noncoding-Transcript-Variant
Rr604528 1427 bp proximal
 SNP C/T T T C C T C T
rs234076437
MGI SNP Detail		 Chr4:148021589 Rr604526 within coordinates of
Rr604528 925 bp proximal
 SNP A/G A G
rs47152806
MGI SNP Detail		 Chr4:148021592 Rr604526 within coordinates of
Rr604528 922 bp proximal
 SNP A/G A G
rs247183437
MGI SNP Detail		 Chr4:148021953 Rr377387 within coordinates of
Rr604527 within coordinates of
Rr604528 561 bp proximal
 SNP C C C
rs50444169
MGI SNP Detail		 Chr4:148022314 Rr377387 within coordinates of
Rr604528 200 bp proximal
 SNP C/T C C T
rs48849390
MGI SNP Detail		 Chr4:148022391 Rr377387 within coordinates of
Rr604528 123 bp proximal
 SNP C C C
rs233788883
MGI SNP Detail		 Chr4:148022432 Rr377387 within coordinates of
Rr604528 82 bp proximal
 SNP T T T
rs47686077
MGI SNP Detail		 Chr4:148022509 Rr604528 5 bp proximal
 SNP A/T A T A A A
rs223584793
MGI SNP Detail		 Chr4:148022607 Rr604528 within coordinates of
 SNP T T T
rs48080204
MGI SNP Detail		 Chr4:148022627 Rr604528 within coordinates of
 SNP A/C C A C C C
rs261604334
MGI SNP Detail		 Chr4:148022641 Rr604528 within coordinates of
 SNP T T T
rs49209022
MGI SNP Detail		 Chr4:148022968 Rr604528 within coordinates of
 SNP A/G A G G A A
rs47818462
MGI SNP Detail		 Chr4:148023006 Rr604528 within coordinates of
 SNP C/G C G C C C
rs50743611
MGI SNP Detail		 Chr4:148023007 Rr604528 within coordinates of
 SNP A/T T A T T T
rs49801864
MGI SNP Detail		 Chr4:148023132 Rr604528 within coordinates of
 SNP C/T C T T C C
rs49080448
MGI SNP Detail		 Chr4:148023139 Rr604528 within coordinates of
 SNP A/C C A C C C
rs50934791
MGI SNP Detail		 Chr4:148023281 Rr604528 within coordinates of
 SNP C/T T C T T T
rs51348436
MGI SNP Detail		 Chr4:148023574 Rr604528 28 bp distal
 SNP C/T C T C C C
rs32494141
MGI SNP Detail		 Chr4:148023600 Rr604528 54 bp distal
 SNP C/G C G G C C C
rs32226127
MGI SNP Detail		 Chr4:148023604 Rr604528 58 bp distal
 SNP A/C A C C A A A
rs49818351
MGI SNP Detail		 Chr4:148023717 Rr604528 171 bp distal
 SNP C/T C C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
C3H/HeJ
C57BL/6J
CZECHII/EiJ
DBA/2J
LG/J
MSM/Ms
SM/J
rs247243168
MGI SNP Detail
Alliance Variant		 Chr4:148023871 2510039O18Rik mRNA-UTR
Rr604528 325 bp distal
 SNP T T T
rs52373230
MGI SNP Detail
Alliance Variant		 Chr4:148023924 2510039O18Rik mRNA-UTR
Rr604528 378 bp distal
 SNP A/G G A A
rs52168541
MGI SNP Detail
Alliance Variant		 Chr4:148024024 2510039O18Rik mRNA-UTR
Rr604528 478 bp distal
 SNP A A A A A
rs52322261
MGI SNP Detail
Alliance Variant		 Chr4:148024029 2510039O18Rik mRNA-UTR
Rr604528 483 bp distal
 SNP C C C C C
rs47441623
MGI SNP Detail
Alliance Variant		 Chr4:148024136 2510039O18Rik mRNA-UTR
Rr604528 590 bp distal
 SNP G G G G G
rs50765406
MGI SNP Detail
Alliance Variant		 Chr4:148024216 2510039O18Rik mRNA-UTR
Rr604528 670 bp distal
 SNP C/T T C T
rs6258764
MGI SNP Detail
Alliance Variant		 Chr4:148024414 2510039O18Rik mRNA-UTR
Rr604528 868 bp distal
 SNP A/G A G G A A A G A
rs6259342
MGI SNP Detail
Alliance Variant		 Chr4:148024530 2510039O18Rik mRNA-UTR
Rr604528 984 bp distal
 SNP A/G G A A G G G G
rs6259359
MGI SNP Detail
Alliance Variant		 Chr4:148024548 2510039O18Rik mRNA-UTR
Rr604528 1002 bp distal
 SNP C/T T C C C
rs31840402
MGI SNP Detail
Alliance Variant		 Chr4:148024694 2510039O18Rik mRNA-UTR
Rr604528 1148 bp distal
 SNP A/G A G G G
rs32323667
MGI SNP Detail
Alliance Variant		 Chr4:148024703 2510039O18Rik mRNA-UTR
Rr604528 1157 bp distal
 SNP C/T C T
rs31757748
MGI SNP Detail
Alliance Variant		 Chr4:148024705 2510039O18Rik mRNA-UTR
Rr604528 1159 bp distal
 SNP C/T C T
rs32368543
MGI SNP Detail
Alliance Variant		 Chr4:148024767 2510039O18Rik mRNA-UTR
Rr604528 1221 bp distal
 SNP C/T T C
rs236421456
MGI SNP Detail
Alliance Variant		 Chr4:148025018 2510039O18Rik mRNA-UTR
Rr604528 1472 bp distal
Rr604529 within coordinates of
 SNP T T T
rs253058731
MGI SNP Detail
Alliance Variant		 Chr4:148025228 2510039O18Rik mRNA-UTR
Cpgi15285 within coordinates of
Rr398852 within coordinates of
Rr604528 1682 bp distal
Rr604529 within coordinates of
 SNP C/G C G
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Showing SNP(s) 1 - 40 of 40
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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