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Mouse SNP Summary
Symbol
Name
ID 		Rr604546
regulatory region 604546
MGI:8066678

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Showing SNP(s) 1 - 39 of 39

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs33031209
MGI SNP Detail		 Chr4:148082792 Rr604546 1897 bp proximal
 SNP C/T T C C T C T
rs32859299
MGI SNP Detail		 Chr4:148082827 Rr604546 1862 bp proximal
 SNP C/G C G G C G C
rs32936817
MGI SNP Detail		 Chr4:148082890 Rr604546 1799 bp proximal
 SNP A/G A G G A G A
rs258187807
MGI SNP Detail		 Chr4:148082896 Rr604546 1793 bp proximal
 SNP C/T T C
rs32830823
MGI SNP Detail		 Chr4:148082901 Rr604546 1788 bp proximal
 SNP C/T C T T C C C
rs238589538
MGI SNP Detail		 Chr4:148082921 Rr604546 1768 bp proximal
 SNP A/G A G
rs254034755
MGI SNP Detail		 Chr4:148083031 Rr604546 1658 bp proximal
 SNP A/T A T
rs227553004
MGI SNP Detail		 Chr4:148083112 Rr604546 1577 bp proximal
 SNP C/T C T
rs253995374
MGI SNP Detail		 Chr4:148083311 Rr604546 1378 bp proximal
 SNP A/G A G
rs33025428
MGI SNP Detail		 Chr4:148083610 Rr604546 1079 bp proximal
 SNP A/C C A A C C C
rs27631563
MGI SNP Detail		 Chr4:148083689 Rr604546 1000 bp proximal
 SNP A/G G A A A G A G A G G G G
rs246415091
MGI SNP Detail		 Chr4:148083721 Rr604546 968 bp proximal
 SNP A/G A G
rs27631562
MGI SNP Detail		 Chr4:148083806 Rr604546 883 bp proximal
 SNP G/T G G G G T G G G T
rs50118740
MGI SNP Detail		 Chr4:148084076 Rr604546 613 bp proximal
 SNP A/G A A G
rs27631561
MGI SNP Detail		 Chr4:148084077 Rr604546 612 bp proximal
 SNP C/T T T T T T T C T T T C
rs27631560
MGI SNP Detail		 Chr4:148084142 Rr604546 547 bp proximal
 SNP C/G C C C C C C G C G C C G
rs27631559
MGI SNP Detail		 Chr4:148084241 Rr604546 448 bp proximal
 SNP A/G A A G G G G A G A G G A A A
rs235714177
MGI SNP Detail		 Chr4:148084436 Rr407043 within coordinates of
Rr604546 253 bp proximal
 SNP C/T T C
rs27631558
MGI SNP Detail		 Chr4:148084437 Rr407043 within coordinates of
Rr604546 252 bp proximal
 SNP A/G G A G A G A G A G G A G G G
rs32302048
MGI SNP Detail		 Chr4:148084473 Rr407043 within coordinates of
Rr604546 216 bp proximal
 SNP A/G G A A G G G
rs27631557
MGI SNP Detail		 Chr4:148084680 Rr407043 within coordinates of
Rr604546 9 bp proximal
 SNP C/T T C C T C C T C T T C T T T
rs27631556
MGI SNP Detail		 Chr4:148084687 Rr407043 within coordinates of
Rr604546 2 bp proximal
 SNP G/T T G T G T T G T T T
rs27631555
MGI SNP Detail		 Chr4:148084832 Rr407043 within coordinates of
Rr604546 within coordinates of
 SNP A/G G A A G G G G G G G
rs32862532
MGI SNP Detail		 Chr4:148084984 Rr407043 within coordinates of
Rr604546 within coordinates of
 SNP A/C A C C A C A
rs27631554
MGI SNP Detail
Alliance Variant		 Chr4:148085185 Nppa mRNA-UTR
Rr407043 within coordinates of
Rr604546 within coordinates of
 SNP C/T C C T T T C T C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs50548777
MGI SNP Detail
Alliance Variant		 Chr4:148085981 Gm13054 within coordinates of
Nppa Intron
Rr407043 within coordinates of
Rr604546 792 bp distal
Rr604547 within coordinates of
 SNP G G G G
rs27631553
MGI SNP Detail
Alliance Variant		 Chr4:148086412 Gm13054 within coordinates of
Nppa mRNA-UTR
Rr604546 1223 bp distal
 SNP C/T T T T T T T T C T T T T C
rs47878843
MGI SNP Detail
Alliance Variant		 Chr4:148086499 Gm13054 within coordinates of
Nppa mRNA-UTR
Rr604546 1310 bp distal
 SNP A/T A T A T
rs108851460
MGI SNP Detail
Alliance Variant		 Chr4:148086501 Gm13054 within coordinates of
Nppa mRNA-UTR
Rr604546 1312 bp distal
 SNP A/T A T T T
rs27631552
MGI SNP Detail		 Chr4:148086752 Gm13054 within coordinates of
Rr604546 1563 bp distal
 SNP A/G A A A A A G A
rs3720542
MGI SNP Detail		 Chr4:148086755 Gm13054 within coordinates of
Rr604546 1566 bp distal
 SNP C/T T C C T C T
rs233712221
MGI SNP Detail		 Chr4:148086781 Gm13054 within coordinates of
Rr604546 1592 bp distal
 SNP C/T C T
rs3721320
MGI SNP Detail		 Chr4:148086932 Gm13054 within coordinates of
Rr604546 1743 bp distal
 SNP A/G G A G G G
rs3721785
MGI SNP Detail		 Chr4:148086955 Gm13054 within coordinates of
Rr604546 1766 bp distal
 SNP A/C/T C A T C
rs3722403
MGI SNP Detail		 Chr4:148087076 Gm13054 within coordinates of
Rr604546 1887 bp distal
 SNP A/C C A C A C C A A C A C A A C C C C C
rs27631551
MGI SNP Detail		 Chr4:148087123 Gm13054 within coordinates of
Rr604546 1934 bp distal
 SNP A/G A A A A A A G A A A A A A A A
rs4136083
MGI SNP Detail		 Chr4:148087147 Gm13054 within coordinates of
Rr604546 1958 bp distal
 SNP C/T C T C T C C T C C T C C T C C C C C
rs211704064
MGI SNP Detail		 Chr4:148087182 Gm13054 within coordinates of
Rr604546 1993 bp distal
 SNP A/G G A
rs27631550
MGI SNP Detail		 Chr4:148087189 Gm13054 within coordinates of
Rr604546 2000 bp distal
 SNP C/T C C T C T C C C C T C C T C C C C C
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Showing SNP(s) 1 - 39 of 39
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory