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Mouse SNP Summary
Symbol
Name
ID 		Rr604841
regulatory region 604841
MGI:8066973

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Showing SNP(s) 1 - 37 of 37

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs3705832
MGI SNP Detail
Alliance Variant		 Chr4:149220092 Cenps Intron
Rr604841 1978 bp proximal
 SNP C/T C T C C
rs3705869
MGI SNP Detail
Alliance Variant		 Chr4:149220112 Cenps Intron
Rr604841 1958 bp proximal
 SNP A/C A C A A
rs3705887
MGI SNP Detail
Alliance Variant		 Chr4:149220123 Cenps Intron
Rr604841 1947 bp proximal
 SNP A/G A G A A
rs32582157
MGI SNP Detail
Alliance Variant		 Chr4:149220151 Cenps Intron
Rr604841 1919 bp proximal
 SNP G/T T T T T T T G T T T T T T T T
rs3706383
MGI SNP Detail
Alliance Variant		 Chr4:149220171 Cenps Intron
Rr604841 1899 bp proximal
 SNP C/T C C C C C C T C C T C C T C C C C C
rs24888035
MGI SNP Detail
Alliance Variant		 Chr4:149220476 Cenps Intron
Rr604841 1594 bp proximal
 SNP A/G A A A A A A G A A A A A A A A
rs52136874
MGI SNP Detail
Alliance Variant		 Chr4:149220571 Cenps Intron
Rr604841 1499 bp proximal
 SNP A/T T A A T
rs48034731
MGI SNP Detail
Alliance Variant		 Chr4:149220713 Cenps Intron
Rr604839 within coordinates of
Rr604841 1357 bp proximal
 SNP C/T C C C T C
rs32583054
MGI SNP Detail
Alliance Variant		 Chr4:149220760 Cenps Intron
Rr604839 within coordinates of
Rr604841 1310 bp proximal
 SNP G/T T T T T T T G T T T T T T T G
rs32583056
MGI SNP Detail
Alliance Variant		 Chr4:149220792 Cenps Intron
Rr604839 within coordinates of
Rr604841 1278 bp proximal
 SNP A/C C C C C C C C C C A C C A C C C C C
rs32583059
MGI SNP Detail
Alliance Variant		 Chr4:149220851 Cenps Intron
Rr604839 within coordinates of
Rr604841 1219 bp proximal
 SNP C/T T T T T T T C T T T T T T T C
rs32583061
MGI SNP Detail
Alliance Variant		 Chr4:149220897 Cenps Intron
Rr604839 within coordinates of
Rr604841 1173 bp proximal
 SNP C/T C C C C C C T C C C C C C C C
rs32583924
MGI SNP Detail
Alliance Variant		 Chr4:149220963 Cenps Intron
Rr604839 within coordinates of
Rr604841 1107 bp proximal
 SNP A/G G G G G G G G A G G A G G A G G G G G
rs32163109
MGI SNP Detail
Alliance Variant		 Chr4:149221187 Cenps Intron
Rr604839 within coordinates of
Rr604841 883 bp proximal
 SNP C/T T C T T T
rs47094913
MGI SNP Detail
Alliance Variant		 Chr4:149221210 Cenps Intron
Rr604839 within coordinates of
Rr604841 860 bp proximal
 SNP A A A A A
rs48306859
MGI SNP Detail
Alliance Variant		 Chr4:149221688 Cenps Intron
Cpgi15320 within coordinates of
Rr604839 within coordinates of
Rr604841 382 bp proximal
 SNP G G G G
rs48138865
MGI SNP Detail
Alliance Variant		 Chr4:149221734 Cenps Intron
Cpgi15320 within coordinates of
Rr604839 within coordinates of
Rr604841 336 bp proximal
 SNP C/T C T C
rs49802892
MGI SNP Detail
Alliance Variant		 Chr4:149221857 Cenps Intron
Cpgi15320 within coordinates of
Rr604839 within coordinates of
Rr604841 213 bp proximal
 SNP T T T T
rs45735425
MGI SNP Detail
Alliance Variant		 Chr4:149221870 Cenps Intron
Cpgi15320 within coordinates of
Rr604839 within coordinates of
Rr604841 200 bp proximal
 SNP C C C C C
rs50149196
MGI SNP Detail
Alliance Variant		 Chr4:149221992 Cenps mRNA-UTR
Cpgi15320 within coordinates of
Rr398863 within coordinates of
Rr604839 within coordinates of
Rr604841 78 bp proximal
 SNP G G G
rs13468668
MGI SNP Detail
Alliance Variant		 Chr4:149221999 Cenps mRNA-UTR
Cpgi15320 within coordinates of
Rr398863 within coordinates of
Rr604839 within coordinates of
Rr604841 71 bp proximal
Tssr44623 within coordinates of
 SNP G G G
rs47160606
MGI SNP Detail		 Chr4:149222178 Cpgi15320 within coordinates of
Rr398863 within coordinates of
Rr604840 within coordinates of
Rr604841 65 bp distal
 SNP A A A
rs51904870
MGI SNP Detail		 Chr4:149222181 Cpgi15320 within coordinates of
Rr398863 within coordinates of
Rr604840 within coordinates of
Rr604841 68 bp distal
 SNP C C C
rs45883939
MGI SNP Detail		 Chr4:149222197 Cpgi15320 within coordinates of
Rr398863 within coordinates of
Rr604840 within coordinates of
Rr604841 84 bp distal
 SNP G G G
rs48274044
MGI SNP Detail		 Chr4:149222208 Cpgi15320 within coordinates of
Rr398863 within coordinates of
Rr604840 within coordinates of
Rr604841 95 bp distal
 SNP T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs50431956
MGI SNP Detail		 Chr4:149222216 Cpgi15320 within coordinates of
Rr398863 within coordinates of
Rr604840 within coordinates of
Rr604841 103 bp distal
 SNP C/T T T C T
rs52528266
MGI SNP Detail		 Chr4:149222279 Rr604840 within coordinates of
Rr604841 166 bp distal
 SNP C C C C
rs31883220
MGI SNP Detail		 Chr4:149222952 Rr604841 839 bp distal
 SNP C/T T T C T T T
rs222026993
MGI SNP Detail		 Chr4:149223086 Rr604841 973 bp distal
 SNP A/G A G
rs32639704
MGI SNP Detail		 Chr4:149223231 Rr604841 1118 bp distal
 SNP A/G G A G G
rs255905469
MGI SNP Detail		 Chr4:149223524 Rr604841 1411 bp distal
 SNP A A A
rs218787584
MGI SNP Detail		 Chr4:149223601 Rr604841 1488 bp distal
 SNP A/G G A
rs49674624
MGI SNP Detail		 Chr4:149223919 Rr604841 1806 bp distal
 SNP C/G G G C G
rs51431839
MGI SNP Detail		 Chr4:149223960 Rr604841 1847 bp distal
 SNP A A A A A
rs32347705
MGI SNP Detail		 Chr4:149224057 Rr604841 1944 bp distal
 SNP A/G A A G A G A
rs33030843
MGI SNP Detail		 Chr4:149224058 Rr604841 1945 bp distal
 SNP C/T T T C T C T
rs32226081
MGI SNP Detail		 Chr4:149224061 Rr604841 1948 bp distal
 SNP C/T T C C T
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Showing SNP(s) 1 - 37 of 37
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory