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Mouse SNP Summary
Symbol
Name
ID 		Rr606166
regulatory region 606166
MGI:8068298

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216256579
MGI SNP Detail
Alliance Variant		 Chr4:154507341 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606165 within coordinates of
Rr606166 1736 bp proximal
Rr927 within coordinates of
 SNP C/T T T T T T T T C T T T T T T T T T T T C C T T T T C T T T T C T C T C T T C C C T T T T T C T T T C
rs221795348
MGI SNP Detail
Alliance Variant		 Chr4:154507354 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606165 within coordinates of
Rr606166 1723 bp proximal
Rr927 within coordinates of
 SNP A/C A C
rs582696263
MGI SNP Detail
Alliance Variant		 Chr4:154507414 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606165 within coordinates of
Rr606166 1663 bp proximal
Rr927 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228862003
MGI SNP Detail
Alliance Variant		 Chr4:154507415 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606165 within coordinates of
Rr606166 1662 bp proximal
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs247680503
MGI SNP Detail
Alliance Variant		 Chr4:154507460 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606165 within coordinates of
Rr606166 1617 bp proximal
Rr927 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G C G G G C G G C G G G G G G G C G G G
rs212305381
MGI SNP Detail
Alliance Variant		 Chr4:154507501 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606165 within coordinates of
Rr606166 1576 bp proximal
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235932725
MGI SNP Detail
Alliance Variant		 Chr4:154507581 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606165 within coordinates of
Rr606166 1496 bp proximal
Rr927 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A G A A A G A A G A A A A A A A G A A A A
rs33062658
MGI SNP Detail
Alliance Variant		 Chr4:154507619 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606165 within coordinates of
Rr606166 1458 bp proximal
Rr927 within coordinates of
 SNP C/T T T T T T T T T C T T T
rs213981901
MGI SNP Detail
Alliance Variant		 Chr4:154507835 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1242 bp proximal
Rr927 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T G T T T G T T G T T T T T T T T T T T T
rs232380702
MGI SNP Detail
Alliance Variant		 Chr4:154507849 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1228 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252523758
MGI SNP Detail
Alliance Variant		 Chr4:154507865 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1212 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221765730
MGI SNP Detail
Alliance Variant		 Chr4:154507912 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1165 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235522993
MGI SNP Detail
Alliance Variant		 Chr4:154507913 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1164 bp proximal
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264120037
MGI SNP Detail
Alliance Variant		 Chr4:154508003 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1074 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
rs220216404
MGI SNP Detail
Alliance Variant		 Chr4:154508005 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1072 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244927613
MGI SNP Detail
Alliance Variant		 Chr4:154508007 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1070 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
rs586230028
MGI SNP Detail
Alliance Variant		 Chr4:154508077 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1000 bp proximal
Rr927 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs262452575
MGI SNP Detail
Alliance Variant		 Chr4:154508124 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 953 bp proximal
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579558649
MGI SNP Detail
Alliance Variant		 Chr4:154508274 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 803 bp proximal
Rr927 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220212298
MGI SNP Detail
Alliance Variant		 Chr4:154508378 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 699 bp proximal
Rr927 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs239280256
MGI SNP Detail
Alliance Variant		 Chr4:154508469 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 608 bp proximal
Rr927 within coordinates of
 SNP A/G A A A A A A A A A G A A A A A A A A A G A G G A A A A G A A A A A G A G A G A A G G G A A A A A G A A A G
rs258201931
MGI SNP Detail
Alliance Variant		 Chr4:154508500 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 577 bp proximal
Rr927 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A G A A G A A A A A A A A A A A A
rs228807413
MGI SNP Detail
Alliance Variant		 Chr4:154508574 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 503 bp proximal
Rr927 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255078345
MGI SNP Detail
Alliance Variant		 Chr4:154508586 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 491 bp proximal
Rr927 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264763155
MGI SNP Detail
Alliance Variant		 Chr4:154508616 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 461 bp proximal
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G A G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229145146
MGI SNP Detail
Alliance Variant		 Chr4:154508618 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 459 bp proximal
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G A G G A G G G G G G G A G G G G
rs255653595
MGI SNP Detail
Alliance Variant		 Chr4:154508637 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 440 bp proximal
Rr927 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A T A A A T A A T A A A A A A A T A A A A
rs213446927
MGI SNP Detail
Alliance Variant		 Chr4:154508653 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 424 bp proximal
Rr927 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A T A A A T A A T A A A A A A A T A A A A
rs232528243
MGI SNP Detail
Alliance Variant		 Chr4:154508660 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 417 bp proximal
Rr927 within coordinates of
 SNP A/G A A A A A A A A A G A A A A A A A A A G A G G A A A A G G A A G G G A G A G A A G G G A A A A A G A A A G
rs246124322
MGI SNP Detail
Alliance Variant		 Chr4:154508667 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 410 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C T C C T C C C C C C C T C C C C
rs215609344
MGI SNP Detail
Alliance Variant		 Chr4:154508783 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 294 bp proximal
Rr927 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G A A G A A A A A A A A A A A A
rs235303721
MGI SNP Detail
Alliance Variant		 Chr4:154508809 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 268 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235333345
MGI SNP Detail
Alliance Variant		 Chr4:154508854 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 223 bp proximal
Rr927 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C C G C C C G C C G C C C C C C C G C C C C
rs261956400
MGI SNP Detail
Alliance Variant		 Chr4:154508894 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 183 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs220159142
MGI SNP Detail
Alliance Variant		 Chr4:154508911 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 166 bp proximal
Rr927 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G G G G G G G G G G G G G G G G T G G G G
rs239419270
MGI SNP Detail
Alliance Variant		 Chr4:154508957 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 120 bp proximal
Rr927 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A G A A G A A A A A A A G A A A A
rs258135652
MGI SNP Detail
Alliance Variant		 Chr4:154508982 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 95 bp proximal
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs222009139
MGI SNP Detail
Alliance Variant		 Chr4:154509020 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 57 bp proximal
Rr927 within coordinates of
 SNP C/T C C C C C C C C C T C C C C C C C C C T C T T C C C C T T C C T T C C T C C C C C T T C C C C C T C C C T
rs251521421
MGI SNP Detail
Alliance Variant		 Chr4:154509104 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C T T C T T T T T T T C T T T T
rs261722303
MGI SNP Detail
Alliance Variant		 Chr4:154509121 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229711203
MGI SNP Detail
Alliance Variant		 Chr4:154509150 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T C T T C T T T T T T T C T T T T
rs250944420
MGI SNP Detail
Alliance Variant		 Chr4:154509170 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G C G G C G G G G G G G G G G G G
rs258604876
MGI SNP Detail
Alliance Variant		 Chr4:154509182 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A C A A C A A A A A A A A A A A A
rs226307012
MGI SNP Detail
Alliance Variant		 Chr4:154509186 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246243005
MGI SNP Detail
Alliance Variant		 Chr4:154509213 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215731782
MGI SNP Detail
Alliance Variant		 Chr4:154509214 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228356126
MGI SNP Detail
Alliance Variant		 Chr4:154509232 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259811265
MGI SNP Detail
Alliance Variant		 Chr4:154509263 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
Rr927 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T
rs211999864
MGI SNP Detail
Alliance Variant		 Chr4:154509492 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs237269893
MGI SNP Detail
Alliance Variant		 Chr4:154509516 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G A A G A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256924555
MGI SNP Detail
Alliance Variant		 Chr4:154509559 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C T T C C C C C C C C C C C C C C C C C C C C
rs214281646
MGI SNP Detail
Alliance Variant		 Chr4:154509562 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
rs232785117
MGI SNP Detail
Alliance Variant		 Chr4:154509568 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252094846
MGI SNP Detail
Alliance Variant		 Chr4:154509594 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs33062661
MGI SNP Detail
Alliance Variant		 Chr4:154509614 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 within coordinates of
 SNP C/T T T T T T T C T T T C T T C T
rs248389952
MGI SNP Detail
Alliance Variant		 Chr4:154509644 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 29 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260964078
MGI SNP Detail
Alliance Variant		 Chr4:154509667 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 52 bp distal
 SNP A/G A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222062381
MGI SNP Detail
Alliance Variant		 Chr4:154509682 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 67 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
rs246396578
MGI SNP Detail
Alliance Variant		 Chr4:154509697 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 82 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G A G G A G G G G G G G A G G G G
rs33063414
MGI SNP Detail
Alliance Variant		 Chr4:154509736 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 121 bp distal
 SNP G/T T T T T T T T T T T G T T G T
rs581872929
MGI SNP Detail
Alliance Variant		 Chr4:154509844 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 229 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C T T C T T T T T T T T T T T T
rs227630055
MGI SNP Detail
Alliance Variant		 Chr4:154509884 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 269 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33063417
MGI SNP Detail
Alliance Variant		 Chr4:154509975 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 360 bp distal
 SNP G/T G G G G G G G G G T G G T G
rs33063420
MGI SNP Detail
Alliance Variant		 Chr4:154510000 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 385 bp distal
 SNP A/G G A G G G G G G G G G G G G G
rs579926050
MGI SNP Detail
Alliance Variant		 Chr4:154510030 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 415 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs583843390
MGI SNP Detail
Alliance Variant		 Chr4:154510031 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 416 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254349361
MGI SNP Detail
Alliance Variant		 Chr4:154510043 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 428 bp distal
 SNP A/C/T A A A A A A A A A C A A A A A A A A A T A C C A A A A T A A A A A C A C A C A A C C C A A A A A A A A C
rs211783673
MGI SNP Detail
Alliance Variant		 Chr4:154510044 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 429 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G A G G G G G G G G G G G
rs228670232
MGI SNP Detail
Alliance Variant		 Chr4:154510078 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 463 bp distal
 SNP A/G A A A A A A A A A G A A A A A A A A A G A G G A A A A G G A A G G G A G A G A A G G G A A A A A G A A A G
rs243805112
MGI SNP Detail
Alliance Variant		 Chr4:154510096 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 481 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C C T C C C C C C C C C C C C
rs33063423
MGI SNP Detail
Alliance Variant		 Chr4:154510097 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 482 bp distal
 SNP A/G A A A A A A G A A G A A A
rs583773357
MGI SNP Detail
Alliance Variant		 Chr4:154510129 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 514 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G A G G G G G G G G G G G G
rs232730377
MGI SNP Detail
Alliance Variant		 Chr4:154510144 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 529 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251871255
MGI SNP Detail
Alliance Variant		 Chr4:154510169 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 554 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216806472
MGI SNP Detail
Alliance Variant		 Chr4:154510175 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 560 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33064286
MGI SNP Detail
Alliance Variant		 Chr4:154510189 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 574 bp distal
 SNP A/C C C C C C C C C C C A C C A C
rs255516715
MGI SNP Detail
Alliance Variant		 Chr4:154510228 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 613 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221181602
MGI SNP Detail
Alliance Variant		 Chr4:154510242 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 627 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243277295
MGI SNP Detail
Alliance Variant		 Chr4:154510263 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 648 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252391394
MGI SNP Detail
Alliance Variant		 Chr4:154510456 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 841 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221411310
MGI SNP Detail
Alliance Variant		 Chr4:154510457 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 842 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T G T T T G T T G T T T T T T T G T T T T
rs241478754
MGI SNP Detail
Alliance Variant		 Chr4:154510501 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 886 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A C A A A C A A C A A A A A A A C A A A A
rs260865329
MGI SNP Detail
Alliance Variant		 Chr4:154510528 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 913 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T G T T T G T T G T T T T T T T G T T T T
rs232875570
MGI SNP Detail
Alliance Variant		 Chr4:154510530 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 915 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G A G G A G G G G G G G G G G G G
rs250940550
MGI SNP Detail
Alliance Variant		 Chr4:154510539 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 924 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G A G G A G G G G G G G G G G G G
rs261365842
MGI SNP Detail
Alliance Variant		 Chr4:154510578 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 963 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33064289
MGI SNP Detail
Alliance Variant		 Chr4:154510626 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1011 bp distal
 SNP A/C A A A A A A A A A A C A A C A
rs243550540
MGI SNP Detail
Alliance Variant		 Chr4:154510635 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1020 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33064292
MGI SNP Detail
Alliance Variant		 Chr4:154510659 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1044 bp distal
 SNP A/G G G G G G G A G G G A G G A G
rs33064975
MGI SNP Detail
Alliance Variant		 Chr4:154510689 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1074 bp distal
 SNP G/T G G G G G G T G G G G G G G G
rs245831848
MGI SNP Detail
Alliance Variant		 Chr4:154510773 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1158 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217965590
MGI SNP Detail
Alliance Variant		 Chr4:154510839 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1224 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240232397
MGI SNP Detail
Alliance Variant		 Chr4:154510858 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1243 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33064978
MGI SNP Detail
Alliance Variant		 Chr4:154510866 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1251 bp distal
 SNP A/G A A A A A A A A A A G A A G A
rs213042312
MGI SNP Detail
Alliance Variant		 Chr4:154510884 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1269 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs33064981
MGI SNP Detail
Alliance Variant		 Chr4:154510925 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1310 bp distal
 SNP C/T C C C C C C C C C T C C T C
rs252139546
MGI SNP Detail
Alliance Variant		 Chr4:154510930 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1315 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221333752
MGI SNP Detail
Alliance Variant		 Chr4:154510942 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1327 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235185033
MGI SNP Detail
Alliance Variant		 Chr4:154511041 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1426 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254662376
MGI SNP Detail
Alliance Variant		 Chr4:154511048 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606166 1433 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory