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Mouse SNP Summary
Symbol
Name
ID 		Rr606176
regulatory region 606176
MGI:8068308

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33067572
MGI SNP Detail
Alliance Variant		 Chr4:154554797 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 1996 bp proximal
 SNP C/T C C C C C C C C C T C T T C
rs212371605
MGI SNP Detail
Alliance Variant		 Chr4:154554801 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 1992 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C
rs235964419
MGI SNP Detail
Alliance Variant		 Chr4:154554806 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 1987 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249680067
MGI SNP Detail
Alliance Variant		 Chr4:154554944 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 1849 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213783636
MGI SNP Detail
Alliance Variant		 Chr4:154554966 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 1827 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs236664470
MGI SNP Detail
Alliance Variant		 Chr4:154555111 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1682 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33068414
MGI SNP Detail
Alliance Variant		 Chr4:154555189 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1604 bp proximal
 SNP A/C C C C C C C C C C C A C A A C
rs221413113
MGI SNP Detail
Alliance Variant		 Chr4:154555246 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1547 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G G A A A G A A A A A G A A G G G G G A A A A A A A A A A A A
rs234336200
MGI SNP Detail
Alliance Variant		 Chr4:154555266 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1527 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33068417
MGI SNP Detail
Alliance Variant		 Chr4:154555274 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1519 bp proximal
 SNP G/T G G G G G G T G G G G G G G G
rs220272948
MGI SNP Detail
Alliance Variant		 Chr4:154555291 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1502 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245190298
MGI SNP Detail
Alliance Variant		 Chr4:154555300 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1493 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs262473969
MGI SNP Detail
Alliance Variant		 Chr4:154555368 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1425 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs223183125
MGI SNP Detail
Alliance Variant		 Chr4:154555374 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1419 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240585059
MGI SNP Detail
Alliance Variant		 Chr4:154555376 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1417 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G A A A G A A A A G A A G G G G G A A A A A A A G A A A A
rs260044727
MGI SNP Detail
Alliance Variant		 Chr4:154555380 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1413 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33068420
MGI SNP Detail
Alliance Variant		 Chr4:154555413 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1380 bp proximal
 SNP A/G G G G G G G G G G G A G G G G
rs228830884
MGI SNP Detail
Alliance Variant		 Chr4:154555444 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1349 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs249218019
MGI SNP Detail
Alliance Variant		 Chr4:154555486 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1307 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G G G G A G G A A A A G G G G G G G G G G G G G
rs264714561
MGI SNP Detail
Alliance Variant		 Chr4:154555600 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1193 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229180357
MGI SNP Detail
Alliance Variant		 Chr4:154555771 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1022 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33068422
MGI SNP Detail
Alliance Variant		 Chr4:154555783 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 1010 bp proximal
 SNP A/G G G G G G G G G A A G
rs213501851
MGI SNP Detail
Alliance Variant		 Chr4:154555818 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 975 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33069335
MGI SNP Detail
Alliance Variant		 Chr4:154555830 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606175 within coordinates of
Rr606176 963 bp proximal
 SNP C/T C C C C C C C C C C T C T T C
rs244977625
MGI SNP Detail
Alliance Variant		 Chr4:154555904 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606175 within coordinates of
Rr606176 889 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33069338
MGI SNP Detail
Alliance Variant		 Chr4:154555907 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606175 within coordinates of
Rr606176 886 bp proximal
 SNP A/G G G G G G G A G G G G G G G G
rs234267770
MGI SNP Detail
Alliance Variant		 Chr4:154556227 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606175 within coordinates of
Rr606176 566 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33069341
MGI SNP Detail
Alliance Variant		 Chr4:154556262 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606175 within coordinates of
Rr606176 531 bp proximal
 SNP A/G G G G G G G G G G G G G A G G
rs580428486
MGI SNP Detail
Alliance Variant		 Chr4:154556693 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 100 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T G T T T G T T T T T G T T G G G G T T T T T T T T T T T T T
rs583249999
MGI SNP Detail
Alliance Variant		 Chr4:154556716 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 77 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs586831833
MGI SNP Detail
Alliance Variant		 Chr4:154556739 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 54 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580677069
MGI SNP Detail
Alliance Variant		 Chr4:154556740 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 53 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs219914868
MGI SNP Detail
Alliance Variant		 Chr4:154556825 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/C/T C C C C C C C C C C C C C C C C C C C T C T A C C C A C C C C A C C A A A A T C C C C C C C C C C C
rs235355822
MGI SNP Detail
Alliance Variant		 Chr4:154556829 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C
rs33070094
MGI SNP Detail
Alliance Variant		 Chr4:154556844 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G A A A A A A A A A A G A G A
rs223636836
MGI SNP Detail
Alliance Variant		 Chr4:154556865 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33070097
MGI SNP Detail
Alliance Variant		 Chr4:154556881 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G A A A A A A A A A G G G A
rs259980642
MGI SNP Detail
Alliance Variant		 Chr4:154556895 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33070100
MGI SNP Detail
Alliance Variant		 Chr4:154557083 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/G C C C C C C C C C C G C G G C
rs243088307
MGI SNP Detail
Alliance Variant		 Chr4:154557092 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33070102
MGI SNP Detail
Alliance Variant		 Chr4:154557102 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/C C C C C C C C C C C C C C A C
rs33070925
MGI SNP Detail
Alliance Variant		 Chr4:154557171 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/G C C C C C C G C C C C C C C C
rs586535839
MGI SNP Detail
Alliance Variant		 Chr4:154557195 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33070928
MGI SNP Detail
Alliance Variant		 Chr4:154557199 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C T C T C C
rs229523680
MGI SNP Detail
Alliance Variant		 Chr4:154557230 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33070931
MGI SNP Detail
Alliance Variant		 Chr4:154557286 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs265376079
MGI SNP Detail
Alliance Variant		 Chr4:154557358 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225871454
MGI SNP Detail
Alliance Variant		 Chr4:154557576 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245096550
MGI SNP Detail
Alliance Variant		 Chr4:154557660 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215600185
MGI SNP Detail
Alliance Variant		 Chr4:154557661 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228018598
MGI SNP Detail
Alliance Variant		 Chr4:154557670 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260094415
MGI SNP Detail
Alliance Variant		 Chr4:154558065 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212033237
MGI SNP Detail
Alliance Variant		 Chr4:154558101 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237308850
MGI SNP Detail
Alliance Variant		 Chr4:154558118 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T T C C C T C C C C C T C C T T T T T C C C C C C C C C C C C
rs33071764
MGI SNP Detail
Alliance Variant		 Chr4:154558120 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G A G A G G
rs33071767
MGI SNP Detail
Alliance Variant		 Chr4:154558341 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G A G A A G
rs234096514
MGI SNP Detail
Alliance Variant		 Chr4:154558356 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33071769
MGI SNP Detail
Alliance Variant		 Chr4:154558514 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G A G A A G
rs242843991
MGI SNP Detail
Alliance Variant		 Chr4:154558542 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33071772
MGI SNP Detail
Alliance Variant		 Chr4:154558550 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr1564 within coordinates of
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G A G A A G
rs33068045
MGI SNP Detail
Alliance Variant		 Chr4:154558638 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 within coordinates of
 SNP A/G G G G G G G G G G G A G A A G
rs246427438
MGI SNP Detail
Alliance Variant		 Chr4:154558645 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262906143
MGI SNP Detail
Alliance Variant		 Chr4:154558750 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32937454
MGI SNP Detail
Alliance Variant		 Chr4:154558768 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 9 bp distal
 SNP C/T C T C C C
rs238959619
MGI SNP Detail
Alliance Variant		 Chr4:154558770 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 11 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257859949
MGI SNP Detail
Alliance Variant		 Chr4:154558772 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 13 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227957935
MGI SNP Detail
Alliance Variant		 Chr4:154558784 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 25 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254383466
MGI SNP Detail
Alliance Variant		 Chr4:154558785 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 26 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211812799
MGI SNP Detail
Alliance Variant		 Chr4:154558802 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 43 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G A A A G A G A A A G A A G G G G G A A A A A A A G A A A A
rs228702770
MGI SNP Detail
Alliance Variant		 Chr4:154558865 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 106 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G G A A A G A A A A A G A A G G G G G A A A A A A A G A A A A
rs255250537
MGI SNP Detail
Alliance Variant		 Chr4:154558899 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 140 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214246663
MGI SNP Detail
Alliance Variant		 Chr4:154558948 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 189 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233760391
MGI SNP Detail
Alliance Variant		 Chr4:154559016 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 257 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253732392
MGI SNP Detail
Alliance Variant		 Chr4:154559126 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 367 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216826674
MGI SNP Detail
Alliance Variant		 Chr4:154559192 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 433 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33068048
MGI SNP Detail
Alliance Variant		 Chr4:154559200 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 441 bp distal
 SNP A/G A A A A A A G A A A G A G G G
rs221229251
MGI SNP Detail
Alliance Variant		 Chr4:154559277 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 518 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243569120
MGI SNP Detail
Alliance Variant		 Chr4:154559283 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 524 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs262673329
MGI SNP Detail
Alliance Variant		 Chr4:154559290 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 531 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C C T T T C T T T T T C T T C C C C C T T T T T T T T T T T T
rs220964691
MGI SNP Detail
Alliance Variant		 Chr4:154559294 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 535 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G A A A G A A A A G A A G G G G G A A A A A A A G A A G
rs240319613
MGI SNP Detail
Alliance Variant		 Chr4:154559307 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 548 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33068051
MGI SNP Detail
Alliance Variant		 Chr4:154559430 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 671 bp distal
 SNP C/T C C C C C C T C C C C C C C T
rs221801857
MGI SNP Detail
Alliance Variant		 Chr4:154559457 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 698 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33068844
MGI SNP Detail
Alliance Variant		 Chr4:154559475 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 716 bp distal
 SNP A/G G G G G G G A G G G A G A A A
rs261223638
MGI SNP Detail
Alliance Variant		 Chr4:154559559 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 800 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228867962
MGI SNP Detail
Alliance Variant		 Chr4:154559576 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 817 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs250635794
MGI SNP Detail
Alliance Variant		 Chr4:154559596 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 837 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G A A A G A G A A A G A A G G G G G A A A A A A A G A A G A
rs258316659
MGI SNP Detail
Alliance Variant		 Chr4:154559605 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 846 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A A G G G A G G G G G A G G A A A A A G G G G G G G G G G G G
rs227350125
MGI SNP Detail
Alliance Variant		 Chr4:154559627 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 868 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33068847
MGI SNP Detail
Alliance Variant		 Chr4:154559628 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 869 bp distal
 SNP C/T T T T T T T C T T T C C C C
rs216600522
MGI SNP Detail
Alliance Variant		 Chr4:154559657 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 898 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240479941
MGI SNP Detail
Alliance Variant		 Chr4:154559669 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 910 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252995724
MGI SNP Detail
Alliance Variant		 Chr4:154559676 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 917 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212878734
MGI SNP Detail
Alliance Variant		 Chr4:154559677 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 918 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33068850
MGI SNP Detail
Alliance Variant		 Chr4:154559683 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 924 bp distal
 SNP C/T T T T T T T T T T T C T C C T
rs250804093
MGI SNP Detail
Alliance Variant		 Chr4:154559685 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 926 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33068853
MGI SNP Detail
Alliance Variant		 Chr4:154559707 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 948 bp distal
 SNP A/T A A A A A A T A A A A A A A T
rs33069736
MGI SNP Detail
Alliance Variant		 Chr4:154559771 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 1012 bp distal
 SNP C/T T T T T T T C T T T T T T T C
rs252807688
MGI SNP Detail
Alliance Variant		 Chr4:154559798 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 1039 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A G A
rs222999777
MGI SNP Detail
Alliance Variant		 Chr4:154559802 Prdm16 Intron
Prdm16 Noncoding-Transcript-Variant
Rr606176 1043 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory