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Mouse SNP Summary
Symbol
Name
ID
Rr606319
regulatory region 606319
MGI:8068451

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223072612
MGI SNP Detail
Alliance Variant
Chr4:155043913 Hes5 mRNA-UTR
Rr606319 1996 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236166812
MGI SNP Detail
Alliance Variant
Chr4:155043965 Hes5 mRNA-UTR
Rr606319 1944 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254839866
MGI SNP Detail
Alliance Variant
Chr4:155043966 Hes5 mRNA-UTR
Rr606319 1943 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs45806117
MGI SNP Detail
Alliance Variant
Chr4:155044009 Hes5 mRNA-UTR
Rr606319 1900 bp proximal
SNP C/G G G G C
rs242811353
MGI SNP Detail
Alliance Variant
Chr4:155044011 Hes5 mRNA-UTR
Rr606319 1898 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48826014
MGI SNP Detail
Alliance Variant
Chr4:155044012 Hes5 mRNA-UTR
Rr606319 1897 bp proximal
SNP C/T C C C T
rs231402818
MGI SNP Detail
Alliance Variant
Chr4:155044026 Hes5 mRNA-UTR
Rr606319 1883 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47758290
MGI SNP Detail
Alliance Variant
Chr4:155044241 Hes5 mRNA-UTR
Rr606319 1668 bp proximal
SNP A/G G G G A
rs216695963
MGI SNP Detail
Alliance Variant
Chr4:155044309 Hes5 mRNA-UTR
Rr606319 1600 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs229172555
MGI SNP Detail
Alliance Variant
Chr4:155044311 Hes5 mRNA-UTR
Rr606319 1598 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243436936
MGI SNP Detail
Alliance Variant
Chr4:155044318 Hes5 mRNA-UTR
Rr606319 1591 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212701326
MGI SNP Detail
Alliance Variant
Chr4:155044319 Hes5 mRNA-UTR
Rr606319 1590 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237886826
MGI SNP Detail
Alliance Variant
Chr4:155044326 Hes5 mRNA-UTR
Rr606319 1583 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258076737
MGI SNP Detail
Alliance Variant
Chr4:155044327 Hes5 mRNA-UTR
Rr606319 1582 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216352606
MGI SNP Detail
Alliance Variant
Chr4:155044345 Hes5 mRNA-UTR
Rr606319 1564 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238782550
MGI SNP Detail
Alliance Variant
Chr4:155044455 Hes5 mRNA-UTR
Rr606319 1454 bp proximal
SNP A/C/G C C C C C C C C C C C C C C C C C C C A C C G C C C C C G C C C C C C C C C G C C C G C C G C C C G
rs252658978
MGI SNP Detail
Alliance Variant
Chr4:155044458 Hes5 mRNA-UTR
Rr606319 1451 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236207662
MGI SNP Detail
Alliance Variant
Chr4:155044462 Hes5 mRNA-UTR
Rr606319 1447 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A A A A A C A A A C A A C A A A A
rs249174857
MGI SNP Detail
Alliance Variant
Chr4:155044488 Hes5 mRNA-UTR
Rr606319 1421 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222871311
MGI SNP Detail
Alliance Variant
Chr4:155044628 Cpgi15452 within coordinates of
Hes5 mRNA-UTR
Rr606319 1281 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247191389
MGI SNP Detail
Alliance Variant
Chr4:155044718 Cpgi15452 within coordinates of
Hes5 mRNA-UTR
Rr606319 1191 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G T G G G G G G G G
rs262681132
MGI SNP Detail
Alliance Variant
Chr4:155044757 Cpgi15452 within coordinates of
Hes5 mRNA-UTR
Rr606319 1152 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C T C C C C C C C C
rs581577930
MGI SNP Detail
Alliance Variant
Chr4:155044792 Cpgi15452 within coordinates of
Hes5 mRNA-UTR
Rr606319 1117 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T A T T T T T T T T
rs584175904
MGI SNP Detail
Alliance Variant
Chr4:155044795 Cpgi15452 within coordinates of
Hes5 mRNA-UTR
Rr606319 1114 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A T A A A A A A A A
rs231841985
MGI SNP Detail
Alliance Variant
Chr4:155044867 Cpgi15452 within coordinates of
Hes5 Coding-Synonymous
Rr606319 1042 bp proximal
SNP C/G C C C C C C C C C G C C C C C C C C C G C C C C C C C C C G C C C C C C C G C C C C C C C C C C C C C C G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241092717
MGI SNP Detail
Alliance Variant
Chr4:155044900 Cpgi15452 within coordinates of
Hes5 Coding-Synonymous
Rr606318 within coordinates of
Rr606319 1009 bp proximal
SNP A/C C A
rs32506461
MGI SNP Detail
Alliance Variant
Chr4:155045145 Cpgi15452 within coordinates of
Hes5 Coding-NonSynonymous
Rr606318 within coordinates of
Rr606319 764 bp proximal
SNP A/G A G A A G
rs260350810
MGI SNP Detail
Alliance Variant
Chr4:155045271 Cpgi15452 within coordinates of
Gm20421 within coordinates of
Hes5 Coding-NonSynonymous
Rr606318 within coordinates of
Rr606319 638 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229208834
MGI SNP Detail
Alliance Variant
Chr4:155045344 Cpgi15452 within coordinates of
Gm20421 within coordinates of
Hes5 Coding-Synonymous
Rr606318 within coordinates of
Rr606319 565 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243538765
MGI SNP Detail
Alliance Variant
Chr4:155045368 Cpgi15452 within coordinates of
Gm20421 within coordinates of
Hes5 Coding-Synonymous
Rr606318 within coordinates of
Rr606319 541 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G A G G G G G G G
rs212839547
MGI SNP Detail
Alliance Variant
Chr4:155045789 Cpgi15452 within coordinates of
Gm20421 within coordinates of
Hes5 Coding-NonSynonymous
Hes5 Intron
Hes5 Noncoding-Transcript-Variant
Rr606319 120 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs229807425
MGI SNP Detail
Alliance Variant
Chr4:155046009 Cpgi15452 within coordinates of
Gm20421 within coordinates of
Hes5 Coding-Synonymous
Rr606319 79 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G T T T T T T G T T T G T T T G T T T G
rs578353036
MGI SNP Detail
Alliance Variant
Chr4:155046054 Cpgi15452 within coordinates of
Gm20421 within coordinates of
Hes5 Coding-Synonymous
Rr606319 124 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C C C C C A C C C A C C C
rs256106365
MGI SNP Detail
Alliance Variant
Chr4:155046410 Hes5 mRNA-UTR
Rr606319 480 bp distal
Rr606321 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T C T T T C T T T T T T C T T T C T T T C T T T C
rs215950627
MGI SNP Detail
Alliance Variant
Chr4:155046632 Hes5 mRNA-UTR
Rr606319 702 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs241285930
MGI SNP Detail
Chr4:155046877 Rr606319 947 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G C G G G G G G G C G G G C
rs246769849
MGI SNP Detail
Chr4:155046885 Rr606319 955 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs217341396
MGI SNP Detail
Chr4:155047001 Rr606319 1071 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs230055176
MGI SNP Detail
Chr4:155047007 Rr606319 1077 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249327417
MGI SNP Detail
Chr4:155047082 Rr606319 1152 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A G A A A G A A A A A A G A A A G A A A G A A A G
rs222601874
MGI SNP Detail
Chr4:155047185 Rr606319 1255 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G A
rs237317634
MGI SNP Detail
Chr4:155047211 Rr606319 1281 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263035272
MGI SNP Detail
Chr4:155047242 Rr606319 1312 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G G G G G G A
rs224007905
MGI SNP Detail
Chr4:155047271 Rr606319 1341 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C C C C C C T
rs241039117
MGI SNP Detail
Chr4:155047301 Rr606319 1371 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C C C C C C T
rs581848753
MGI SNP Detail
Chr4:155047350 Gm57104 within coordinates of
Rr606319 1420 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G G G G G G A
rs260380861
MGI SNP Detail
Chr4:155047390 Gm57104 within coordinates of
Rr606319 1460 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C C C C C C T
rs223210544
MGI SNP Detail
Chr4:155047429 Gm57104 within coordinates of
Rr606319 1499 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs236845333
MGI SNP Detail
Chr4:155047473 Gm57104 within coordinates of
Rr606319 1543 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C T C C C T
rs256785737
MGI SNP Detail
Chr4:155047474 Gm57104 within coordinates of
Rr606319 1544 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A G A A A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230135216
MGI SNP Detail
Chr4:155047491 Gm57104 within coordinates of
Rr606319 1561 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs251415654
MGI SNP Detail
Chr4:155047497 Gm57104 within coordinates of
Rr606319 1567 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs265457813
MGI SNP Detail
Chr4:155047498 Gm57104 within coordinates of
Rr606319 1568 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T C T T T C
rs232556897
MGI SNP Detail
Chr4:155047578 Gm57104 within coordinates of
Rr606319 1648 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246892648
MGI SNP Detail
Chr4:155047626 Gm57104 within coordinates of
Rr606319 1696 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217436818
MGI SNP Detail
Chr4:155047697 Gm57104 within coordinates of
Rr606319 1767 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G A G G G A G G G G
rs230089366
MGI SNP Detail
Chr4:155047756 Gm57104 within coordinates of
Rr606319 1826 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243133321
MGI SNP Detail
Chr4:155047760 Gm57104 within coordinates of
Rr606319 1830 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T C T T T C T T T T
rs214281212
MGI SNP Detail
Chr4:155047768 Gm57104 within coordinates of
Rr606319 1838 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A T A A A A A A A A
rs239405012
MGI SNP Detail
Chr4:155047828 Gm57104 within coordinates of
Rr606319 1898 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T C T T T C T T T T
rs258919841
MGI SNP Detail
Chr4:155047871 Gm57104 within coordinates of
Rr606319 1941 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225476627
MGI SNP Detail
Chr4:155047889 Gm57104 within coordinates of
Rr606319 1959 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C
rs235816729
MGI SNP Detail
Chr4:155047910 Gm57104 within coordinates of
Rr606319 1980 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G A G G G A G G G G
rs254164507
MGI SNP Detail
Chr4:155047912 Gm57104 within coordinates of
Rr606319 1982 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G A G G G G G G G G
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Showing SNP(s) 1 - 64 of 64

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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