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Mouse SNP Summary
Symbol
Name
ID
Rr606690
regulatory region 606690
MGI:8068822

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252180042
MGI SNP Detail
Alliance Variant
Chr4:156268789 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1997 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T G T T T G T T T T G T T T G G T T G T T T T G T T T T G T T T T T T T
rs222213812
MGI SNP Detail
Alliance Variant
Chr4:156268834 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1952 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241707427
MGI SNP Detail
Alliance Variant
Chr4:156268908 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1878 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264703401
MGI SNP Detail
Alliance Variant
Chr4:156268921 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1865 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221603311
MGI SNP Detail
Alliance Variant
Chr4:156268941 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1845 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33243198
MGI SNP Detail
Alliance Variant
Chr4:156268963 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1823 bp proximal
SNP C/G C C C G G G C G G C G G G
rs246046660
MGI SNP Detail
Alliance Variant
Chr4:156269001 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1785 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G A G G G A A G G A G G G G G G G G G A G G G G G G G
rs262836557
MGI SNP Detail
Alliance Variant
Chr4:156269016 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1770 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226526606
MGI SNP Detail
Alliance Variant
Chr4:156269067 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1719 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33243201
MGI SNP Detail
Alliance Variant
Chr4:156269173 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1613 bp proximal
SNP A/T A A A A A A A A A A A A T A
rs259772696
MGI SNP Detail
Alliance Variant
Chr4:156269217 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1569 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33243203
MGI SNP Detail
Alliance Variant
Chr4:156269296 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1490 bp proximal
SNP A/G G G G G G G A G G G A G G A G
rs583662655
MGI SNP Detail
Alliance Variant
Chr4:156269301 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1485 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs587298507
MGI SNP Detail
Alliance Variant
Chr4:156269307 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1479 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581020711
MGI SNP Detail
Alliance Variant
Chr4:156269331 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1455 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs584391653
MGI SNP Detail
Alliance Variant
Chr4:156269333 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1453 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs586499265
MGI SNP Detail
Alliance Variant
Chr4:156269355 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1431 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G A G G G G A G G G A A G G A G G G G A G G G G A G G G G G G G
rs263050928
MGI SNP Detail
Alliance Variant
Chr4:156269368 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1418 bp proximal
SNP G G G
rs211935437
MGI SNP Detail
Alliance Variant
Chr4:156269382 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1404 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235119493
MGI SNP Detail
Alliance Variant
Chr4:156269384 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1402 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580686833
MGI SNP Detail
Alliance Variant
Chr4:156269392 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1394 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254835133
MGI SNP Detail
Alliance Variant
Chr4:156269400 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1386 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs214124760
MGI SNP Detail
Alliance Variant
Chr4:156269430 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1356 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs233174218
MGI SNP Detail
Alliance Variant
Chr4:156269458 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1328 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33244176
MGI SNP Detail
Alliance Variant
Chr4:156269582 Agrn Coding-Synonymous
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 1204 bp proximal
SNP C/T C C C C C C T C C C T C C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222163170
MGI SNP Detail
Alliance Variant
Chr4:156269663 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1123 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235442562
MGI SNP Detail
Alliance Variant
Chr4:156269680 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1106 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs579291701
MGI SNP Detail
Alliance Variant
Chr4:156269723 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1063 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221290153
MGI SNP Detail
Alliance Variant
Chr4:156269772 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1014 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33236404
MGI SNP Detail
Alliance Variant
Chr4:156269783 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 1003 bp proximal
SNP C/T T T T T T T C T T T C T T T T
rs582938596
MGI SNP Detail
Alliance Variant
Chr4:156269798 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 988 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs584845565
MGI SNP Detail
Alliance Variant
Chr4:156269815 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 971 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32386783
MGI SNP Detail
Alliance Variant
Chr4:156269832 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 954 bp proximal
SNP C/T T C C T C C C C C C T C C C T C C T C
rs221110112
MGI SNP Detail
Alliance Variant
Chr4:156269833 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 953 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240478047
MGI SNP Detail
Alliance Variant
Chr4:156269841 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 945 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259915903
MGI SNP Detail
Alliance Variant
Chr4:156269845 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 941 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228454348
MGI SNP Detail
Alliance Variant
Chr4:156269868 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 918 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260029760
MGI SNP Detail
Alliance Variant
Chr4:156269873 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 913 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579068699
MGI SNP Detail
Alliance Variant
Chr4:156269895 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 891 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33236409
MGI SNP Detail
Alliance Variant
Chr4:156269899 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 887 bp proximal
SNP C/G C C C C C C G C C C G C C C C
rs582048669
MGI SNP Detail
Alliance Variant
Chr4:156269911 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 875 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228955000
MGI SNP Detail
Alliance Variant
Chr4:156269913 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 873 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C G C C C C C C C C G C C C G G C C G C C C C C C C C C G C C C C C C C
rs585440979
MGI SNP Detail
Alliance Variant
Chr4:156269915 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 871 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32660070
MGI SNP Detail
Alliance Variant
Chr4:156269926 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 860 bp proximal
SNP A/G G A G G A A G A G G G A G G G A G G A
rs214064001
MGI SNP Detail
Alliance Variant
Chr4:156269940 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 846 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579949622
MGI SNP Detail
Alliance Variant
Chr4:156269990 Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 796 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226554082
MGI SNP Detail
Alliance Variant
Chr4:156270057 Agrn Coding-Synonymous
Agrn Intron
Agrn Noncoding-Transcript-Variant
Rr606690 729 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs246285166
MGI SNP Detail
Alliance Variant
Chr4:156270166 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 620 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T C T T T C T T T T C T T T C C T T C T T T T C T T T T C T T T T T T T
rs217014033
MGI SNP Detail
Alliance Variant
Chr4:156270173 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 613 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240548249
MGI SNP Detail
Alliance Variant
Chr4:156270174 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 612 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261107510
MGI SNP Detail
Alliance Variant
Chr4:156270191 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 595 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213142705
MGI SNP Detail
Alliance Variant
Chr4:156270199 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 587 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs238268926
MGI SNP Detail
Alliance Variant
Chr4:156270238 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 548 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252245587
MGI SNP Detail
Alliance Variant
Chr4:156270270 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 516 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221059349
MGI SNP Detail
Alliance Variant
Chr4:156270292 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 494 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241343299
MGI SNP Detail
Alliance Variant
Chr4:156270340 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606690 446 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33891404
MGI SNP Detail
Alliance Variant
Chr4:156270351 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606687 within coordinates of
Rr606690 435 bp proximal
SNP A/C A C A C A C
rs33892076
MGI SNP Detail
Alliance Variant
Chr4:156270352 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606687 within coordinates of
Rr606690 434 bp proximal
SNP A/T A T A T A T
rs248348385
MGI SNP Detail
Alliance Variant
Chr4:156270408 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606687 within coordinates of
Rr606690 378 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T A T T T A T T T T A T T T A A T T A T T T T T T T T T A T T T T T T T
rs264595288
MGI SNP Detail
Alliance Variant
Chr4:156270440 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606687 within coordinates of
Rr606690 346 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228635447
MGI SNP Detail
Alliance Variant
Chr4:156270463 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606687 within coordinates of
Rr606690 323 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245667747
MGI SNP Detail
Alliance Variant
Chr4:156270473 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606687 within coordinates of
Rr606690 313 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256055763
MGI SNP Detail
Alliance Variant
Chr4:156270474 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Rr606687 within coordinates of
Rr606690 312 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T G G T T G T T T T G T T T G G G T G T T T T G T T T T G T T G T T T T
rs226493188
MGI SNP Detail
Alliance Variant
Chr4:156270616 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606687 within coordinates of
Rr606690 170 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245688867
MGI SNP Detail
Alliance Variant
Chr4:156270621 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606687 within coordinates of
Rr606690 165 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A C C A A C A A A A A A A A A C A A A A A A A
rs216409229
MGI SNP Detail
Alliance Variant
Chr4:156270641 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606687 within coordinates of
Rr606690 145 bp proximal
Tssr40793 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235713521
MGI SNP Detail
Alliance Variant
Chr4:156270647 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606687 within coordinates of
Rr606690 139 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T C T T T T T T T T T T T
rs581766610
MGI SNP Detail
Alliance Variant
Chr4:156270650 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 136 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249496245
MGI SNP Detail
Alliance Variant
Chr4:156270678 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 108 bp proximal
Tssr45011 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T C C T C T T T T C T T T T C T T T T T T
rs585515757
MGI SNP Detail
Alliance Variant
Chr4:156270679 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 107 bp proximal
Tssr45011 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213563700
MGI SNP Detail
Alliance Variant
Chr4:156270690 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 96 bp proximal
Tssr45011 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33891515
MGI SNP Detail
Alliance Variant
Chr4:156270691 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 95 bp proximal
Tssr45011 within coordinates of
SNP C/G C G C G G G C
rs33892183
MGI SNP Detail
Alliance Variant
Chr4:156270723 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 63 bp proximal
Tssr45011 within coordinates of
SNP C/T C C T C T C C
rs215357461
MGI SNP Detail
Alliance Variant
Chr4:156270751 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 35 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235010180
MGI SNP Detail
Alliance Variant
Chr4:156270781 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 5 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254477246
MGI SNP Detail
Alliance Variant
Chr4:156270784 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 2 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226824416
MGI SNP Detail
Alliance Variant
Chr4:156270805 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs251225002
MGI SNP Detail
Alliance Variant
Chr4:156270814 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Cpgi15501 within coordinates of
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 7 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255485932
MGI SNP Detail
Alliance Variant
Chr4:156270820 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 13 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220872901
MGI SNP Detail
Alliance Variant
Chr4:156270822 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 15 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs242995972
MGI SNP Detail
Alliance Variant
Chr4:156270824 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 17 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255992992
MGI SNP Detail
Alliance Variant
Chr4:156270852 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 45 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226625952
MGI SNP Detail
Alliance Variant
Chr4:156270858 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 51 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A G G A A G A A A A G A A G G G A G A A A A G A A A A G A A A A A A A
rs239831437
MGI SNP Detail
Alliance Variant
Chr4:156270859 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 52 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G C C G G C G G G G C G G C C C G C G G G G C G G G G C G G G G G G G
rs258587492
MGI SNP Detail
Alliance Variant
Chr4:156270875 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 68 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs233578920
MGI SNP Detail
Alliance Variant
Chr4:156270884 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 77 bp distal
SNP A/C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T A T T T T
rs33891496
MGI SNP Detail
Alliance Variant
Chr4:156270892 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 85 bp distal
SNP C/T C C T C C
rs262157800
MGI SNP Detail
Alliance Variant
Chr4:156270901 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 94 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230488835
MGI SNP Detail
Alliance Variant
Chr4:156270918 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 111 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A G A A A A G A A A G G A A G A A A A G A A A A G A A A A A A A
rs245974961
MGI SNP Detail
Alliance Variant
Chr4:156270931 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 124 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215484001
MGI SNP Detail
Alliance Variant
Chr4:156270963 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 156 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234938670
MGI SNP Detail
Alliance Variant
Chr4:156270973 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 166 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C C C T C C C T T C C T C C C C T C C C C T C C T C C C C
rs584097231
MGI SNP Detail
Alliance Variant
Chr4:156270975 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 168 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586009775
MGI SNP Detail
Alliance Variant
Chr4:156270989 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 182 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248203244
MGI SNP Detail
Alliance Variant
Chr4:156271024 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 217 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219146900
MGI SNP Detail
Alliance Variant
Chr4:156271036 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 229 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234766508
MGI SNP Detail
Alliance Variant
Chr4:156271057 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 250 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260835316
MGI SNP Detail
Alliance Variant
Chr4:156271077 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 270 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C
rs33891400
MGI SNP Detail
Alliance Variant
Chr4:156271117 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 310 bp distal
SNP A/G A G A A
rs231434704
MGI SNP Detail
Alliance Variant
Chr4:156271137 Agrn Intron
Agrn mRNA-UTR
Agrn Noncoding-Transcript-Variant
Gm46878 within coordinates of
Rr606689 within coordinates of
Rr606690 330 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A G G A A G A A A A G A A A G G G A G A A A A G A A A A G A G A A A A
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Showing SNP(s) 1 - 100 of 167

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory