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Mouse SNP Summary
Symbol
Name
ID 		Rr608322
regulatory region 608322
MGI:8070454

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262526482
MGI SNP Detail		 Chr5:24650343 Cpgi15601 within coordinates of
Rr608320 within coordinates of
Rr608322 1962 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231521505
MGI SNP Detail		 Chr5:24650384 Cpgi15601 within coordinates of
Rr608320 within coordinates of
Rr608322 1921 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242446505
MGI SNP Detail		 Chr5:24650437 Cpgi15601 within coordinates of
Rr608320 within coordinates of
Rr608322 1868 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G G G C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs213077512
MGI SNP Detail
Alliance Variant		 Chr5:24650522 Cpgi15601 within coordinates of
Rr608320 within coordinates of
Rr608322 1783 bp proximal
Tmub1 mRNA-UTR
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C C C G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs228524445
MGI SNP Detail
Alliance Variant		 Chr5:24650562 Cpgi15601 within coordinates of
Rr608320 within coordinates of
Rr608322 1743 bp proximal
Tmub1 mRNA-UTR
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs247559853
MGI SNP Detail
Alliance Variant		 Chr5:24650585 Cpgi15601 within coordinates of
Rr608320 within coordinates of
Rr608322 1720 bp proximal
Tmub1 mRNA-UTR
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29527937
MGI SNP Detail
Alliance Variant		 Chr5:24650602 Cpgi15601 within coordinates of
Rr608320 within coordinates of
Rr608322 1703 bp proximal
Tmub1 mRNA-UTR
 SNP C/T C C C C C C C T C C
rs32018163
MGI SNP Detail
Alliance Variant		 Chr5:24650784 Cpgi15601 within coordinates of
Rr608322 1521 bp proximal
Tmub1 Coding-NonSynonymous
Tmub1 mRNA-UTR
 SNP C/T C C C C C C C T C C C C C
rs262016976
MGI SNP Detail
Alliance Variant		 Chr5:24651241 Rr608322 1064 bp proximal
Tmub1 Coding-NonSynonymous
Tmub1 Coding-Synonymous
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243569932
MGI SNP Detail
Alliance Variant		 Chr5:24651354 Rr608322 951 bp proximal
Tmub1 Intron
 SNP C/T T C
rs214581242
MGI SNP Detail
Alliance Variant		 Chr5:24651417 Rr608322 888 bp proximal
Tmub1 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236080341
MGI SNP Detail
Alliance Variant		 Chr5:24651433 Rr608322 872 bp proximal
Tmub1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250154688
MGI SNP Detail
Alliance Variant		 Chr5:24651603 Rr608322 702 bp proximal
Tmub1 Coding-Synonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222488807
MGI SNP Detail
Alliance Variant		 Chr5:24651746 Rr608322 559 bp proximal
Tmub1 Coding-NonSynonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242451333
MGI SNP Detail
Alliance Variant		 Chr5:24651924 Rr608322 381 bp proximal
Tmub1 Coding-Synonymous
Tmub1 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252538073
MGI SNP Detail
Alliance Variant		 Chr5:24652134 Rr608322 171 bp proximal
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33288530
MGI SNP Detail
Alliance Variant		 Chr5:24652165 Rr608322 140 bp proximal
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP C/G G C
rs246835099
MGI SNP Detail
Alliance Variant		 Chr5:24652220 Rr608322 85 bp proximal
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212964890
MGI SNP Detail
Alliance Variant		 Chr5:24652360 Rr608322 within coordinates of
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP C/T T C
rs265174679
MGI SNP Detail
Alliance Variant		 Chr5:24652418 Rr608322 within coordinates of
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33334787
MGI SNP Detail
Alliance Variant		 Chr5:24652538 Rr608322 within coordinates of
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP A/T T T A
rs29817886
MGI SNP Detail
Alliance Variant		 Chr5:24652540 Rr608322 within coordinates of
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP C/T C C T
rs233240910
MGI SNP Detail
Alliance Variant		 Chr5:24652576 Cpgi15602 within coordinates of
Rr608322 within coordinates of
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP C/G C G
rs231128645
MGI SNP Detail
Alliance Variant		 Chr5:24652591 Cpgi15602 within coordinates of
Rr608322 within coordinates of
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G
rs260379875
MGI SNP Detail
Alliance Variant		 Chr5:24652619 Cpgi15602 within coordinates of
Rr608322 within coordinates of
Tmub1 Intron
Tmub1 mRNA-UTR
 SNP C/G G C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236203551
MGI SNP Detail
Alliance Variant		 Chr5:24652701 Cpgi15602 within coordinates of
Rr608322 within coordinates of
Tmub1 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs32018160
MGI SNP Detail		 Chr5:24652968 2310074N15Rik within coordinates of
Cpgi15602 within coordinates of
Rr608322 52 bp distal
Rr608323 within coordinates of
 SNP G/T G G G G G G G T G G G G G
rs228690216
MGI SNP Detail		 Chr5:24653205 2310074N15Rik within coordinates of
Rr608322 289 bp distal
Rr608323 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247496359
MGI SNP Detail		 Chr5:24653321 2310074N15Rik within coordinates of
Rr608322 405 bp distal
Rr608323 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215789171
MGI SNP Detail		 Chr5:24653365 2310074N15Rik within coordinates of
Rr608322 449 bp distal
Rr608323 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29525214
MGI SNP Detail		 Chr5:24653415 2310074N15Rik within coordinates of
Rr608322 499 bp distal
 SNP C/T C C C T
rs250644287
MGI SNP Detail		 Chr5:24653454 2310074N15Rik within coordinates of
Rr608322 538 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs236183507
MGI SNP Detail		 Chr5:24653509 Rr608322 593 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262784587
MGI SNP Detail		 Chr5:24653510 Rr608322 594 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G
rs224623950
MGI SNP Detail		 Chr5:24653604 Rr608322 688 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237661463
MGI SNP Detail		 Chr5:24653633 Rr608322 717 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257401338
MGI SNP Detail		 Chr5:24653665 Rr608322 749 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223676059
MGI SNP Detail		 Chr5:24653705 Rr608322 789 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32018157
MGI SNP Detail		 Chr5:24653706 Rr608322 790 bp distal
 SNP A/G G G G G G G G A A G G G G
rs236135078
MGI SNP Detail		 Chr5:24653741 Rr608322 825 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254896178
MGI SNP Detail		 Chr5:24653764 Rr608322 848 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs222205783
MGI SNP Detail		 Chr5:24653867 Rr608322 951 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241698192
MGI SNP Detail		 Chr5:24653882 Rr608322 966 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265553218
MGI SNP Detail		 Chr5:24653886 Rr608322 970 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs240926057
MGI SNP Detail		 Chr5:24653893 Rr608322 977 bp distal
 SNP C/T C T
rs255408765
MGI SNP Detail		 Chr5:24653950 Rr608322 1034 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262759217
MGI SNP Detail		 Chr5:24653955 Rr608322 1039 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs224218999
MGI SNP Detail		 Chr5:24654007 Rr608322 1091 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244135020
MGI SNP Detail		 Chr5:24654016 Rr608322 1100 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs216543423
MGI SNP Detail		 Chr5:24654058 Rr608322 1142 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236273682
MGI SNP Detail		 Chr5:24654130 Rr608322 1214 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252017500
MGI SNP Detail		 Chr5:24654180 Rr608322 1264 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32018154
MGI SNP Detail		 Chr5:24654209 Rr608322 1293 bp distal
 SNP C/T T T T T T T T C T T T T
rs235872166
MGI SNP Detail		 Chr5:24654228 Rr608322 1312 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs262287963
MGI SNP Detail		 Chr5:24654263 Rr608322 1347 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220346733
MGI SNP Detail		 Chr5:24654321 Rr608322 1405 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230313581
MGI SNP Detail		 Chr5:24654333 Rr608322 1417 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249294774
MGI SNP Detail		 Chr5:24654413 Rr608322 1497 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29544141
MGI SNP Detail		 Chr5:24654415 Rr608322 1499 bp distal
 SNP A/C C C A
rs251748772
MGI SNP Detail		 Chr5:24654477 Rr608322 1561 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263267397
MGI SNP Detail		 Chr5:24654479 Rr608322 1563 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225458649
MGI SNP Detail		 Chr5:24654493 Rr608322 1577 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243215278
MGI SNP Detail		 Chr5:24654506 Rr608322 1590 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265313823
MGI SNP Detail		 Chr5:24654586 Rr608322 1670 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs224308128
MGI SNP Detail		 Chr5:24654588 Rr608322 1672 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244219783
MGI SNP Detail		 Chr5:24654597 Rr608322 1681 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33394429
MGI SNP Detail		 Chr5:24654713 Gm10472 within coordinates of
Rr608322 1797 bp distal
 SNP G/T T T G
rs229072432
MGI SNP Detail		 Chr5:24654734 Gm10472 within coordinates of
Rr608322 1818 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257155069
MGI SNP Detail		 Chr5:24654819 Gm10472 within coordinates of
Rr608322 1903 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs216394893
MGI SNP Detail		 Chr5:24654876 Gm10472 within coordinates of
Rr608322 1960 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs229972923
MGI SNP Detail		 Chr5:24654904 Gm10472 within coordinates of
Rr608322 1988 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs251313411
MGI SNP Detail		 Chr5:24654915 Gm10472 within coordinates of
Rr608322 1999 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 72 of 72
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MGI 6.24 		The Jackson Laboratory