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Mouse SNP Summary
Symbol
Name
ID 		Rr608546
regulatory region 608546
MGI:8070678

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227897935
MGI SNP Detail		 Chr5:25822398 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1998 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C T C C C C C C T C C C C C C C T C C C C
rs52012238
MGI SNP Detail		 Chr5:25822408 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1988 bp proximal
 SNP C/T C C C C C T C C T T C C T C
rs213930025
MGI SNP Detail		 Chr5:25822495 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1901 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48869154
MGI SNP Detail		 Chr5:25822574 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1822 bp proximal
 SNP C/T C C C C C C T C C C C C C C C
rs251599871
MGI SNP Detail		 Chr5:25822623 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1773 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs46087937
MGI SNP Detail		 Chr5:25822686 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1710 bp proximal
 SNP A/T A A A A A A T A A A A A A A A
rs242723256
MGI SNP Detail		 Chr5:25822800 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1596 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs3160481
MGI SNP Detail		 Chr5:25822892 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1504 bp proximal
 SNP A/G G G A A A G A G A A G G A G G G
rs220746760
MGI SNP Detail		 Chr5:25822897 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1499 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234451276
MGI SNP Detail		 Chr5:25822971 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1425 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251866416
MGI SNP Detail		 Chr5:25822974 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1422 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs3160480
MGI SNP Detail		 Chr5:25823068 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1328 bp proximal
 SNP A/G G G A A
rs241221940
MGI SNP Detail		 Chr5:25823088 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1308 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs3160479
MGI SNP Detail		 Chr5:25823119 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1277 bp proximal
 SNP A/G G G A A
rs223516760
MGI SNP Detail		 Chr5:25823139 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1257 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T T C C C C T C C C C C C C C C C C C C C C C C C C
rs250202224
MGI SNP Detail		 Chr5:25823152 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1244 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261981873
MGI SNP Detail		 Chr5:25823195 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1201 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs3160478
MGI SNP Detail		 Chr5:25823214 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1182 bp proximal
 SNP A/G G A
rs251700705
MGI SNP Detail		 Chr5:25823223 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1173 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255690850
MGI SNP Detail		 Chr5:25823242 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1154 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs227847133
MGI SNP Detail		 Chr5:25823258 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1138 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3160477
MGI SNP Detail		 Chr5:25823297 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1099 bp proximal
 SNP C/T C T
rs217630352
MGI SNP Detail		 Chr5:25823359 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1037 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs239885528
MGI SNP Detail		 Chr5:25823396 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1000 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583339073
MGI SNP Detail		 Chr5:25823478 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 918 bp proximal
 SNP C/T C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580677677
MGI SNP Detail		 Chr5:25823496 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 900 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108669512
MGI SNP Detail		 Chr5:25823500 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 896 bp proximal
 SNP T T
rs212521055
MGI SNP Detail		 Chr5:25823506 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 890 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs3156547
MGI SNP Detail		 Chr5:25823542 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 854 bp proximal
 SNP G G
rs251820889
MGI SNP Detail		 Chr5:25823545 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 851 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219454028
MGI SNP Detail		 Chr5:25823550 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 846 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs108539519
MGI SNP Detail		 Chr5:25823577 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 819 bp proximal
 SNP A/T A T T T T T A T T T T T T T T T T A T A A T T T T A A T A T A T T T T A T A T T T T T T T T T T T
rs107846712
MGI SNP Detail		 Chr5:25823585 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 811 bp proximal
 SNP A/T A T T T T T A T T T T T T T T T T A T A A T T T T T A T T T T T A T A T T T T T T T T T
rs582826153
MGI SNP Detail		 Chr5:25823609 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 787 bp proximal
 SNP A/T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T
rs587520024
MGI SNP Detail		 Chr5:25823716 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 680 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs3160476
MGI SNP Detail		 Chr5:25823815 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 581 bp proximal
 SNP C/T C T T T T T T C C T C C T
rs247049164
MGI SNP Detail		 Chr5:25823936 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 460 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255650346
MGI SNP Detail		 Chr5:25824072 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 324 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52480794
MGI SNP Detail		 Chr5:25824131 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 265 bp proximal
 SNP C/T T T T T T T T T C C T T C T
rs584979789
MGI SNP Detail		 Chr5:25824156 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 240 bp proximal
 SNP C/T C C T T T T T C T T T T T T T T T T T T C T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T
rs581207388
MGI SNP Detail		 Chr5:25824496 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584476618
MGI SNP Detail		 Chr5:25824769 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 189 bp distal
Rr608547 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33204474
MGI SNP Detail		 Chr5:25824791 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 211 bp distal
Rr608547 within coordinates of
 SNP A/G G A
rs578494114
MGI SNP Detail		 Chr5:25824814 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 234 bp distal
Rr608547 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs581937375
MGI SNP Detail		 Chr5:25824819 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 239 bp distal
Rr608547 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585070987
MGI SNP Detail		 Chr5:25824823 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 243 bp distal
Rr608547 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579293410
MGI SNP Detail		 Chr5:25824847 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 267 bp distal
Rr608547 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582737656
MGI SNP Detail		 Chr5:25824871 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 291 bp distal
Rr608547 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs245480569
MGI SNP Detail		 Chr5:25824882 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 302 bp distal
Rr608547 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs260152128
MGI SNP Detail		 Chr5:25824884 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 304 bp distal
Rr608547 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234450596
MGI SNP Detail		 Chr5:25824921 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 341 bp distal
Rr608547 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs250284667
MGI SNP Detail		 Chr5:25824925 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 345 bp distal
Rr608547 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212819575
MGI SNP Detail		 Chr5:25824932 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 352 bp distal
Rr608547 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs234366393
MGI SNP Detail		 Chr5:25824944 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 364 bp distal
Rr608547 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs245516508
MGI SNP Detail		 Chr5:25824961 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 381 bp distal
Rr608547 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213398126
MGI SNP Detail		 Chr5:25825003 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 423 bp distal
Rr608547 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs234552779
MGI SNP Detail		 Chr5:25825035 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 455 bp distal
Rr608547 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252654471
MGI SNP Detail		 Chr5:25825037 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 457 bp distal
Rr608547 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219020076
MGI SNP Detail		 Chr5:25825102 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 522 bp distal
Rr608547 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G
rs50455055
MGI SNP Detail		 Chr5:25825118 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 538 bp distal
Rr608547 within coordinates of
 SNP A/T T T T T T T T T T T T T T A T
rs256278551
MGI SNP Detail		 Chr5:25825131 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 551 bp distal
Rr608547 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220207332
MGI SNP Detail		 Chr5:25825157 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 577 bp distal
Rr608547 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238486915
MGI SNP Detail		 Chr5:25825160 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 580 bp distal
Rr608547 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs49269400
MGI SNP Detail		 Chr5:25825168 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 588 bp distal
 SNP A/C A A A A A A C A A A A A A C A
rs586199198
MGI SNP Detail		 Chr5:25825170 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 590 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221522377
MGI SNP Detail		 Chr5:25825258 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 678 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs239428276
MGI SNP Detail		 Chr5:25825259 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 679 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs266206010
MGI SNP Detail		 Chr5:25825263 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 683 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233395735
MGI SNP Detail		 Chr5:25825282 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 702 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C
rs245463822
MGI SNP Detail		 Chr5:25825283 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 703 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs3160473
MGI SNP Detail		 Chr5:25825308 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 728 bp distal
 SNP C/T C T T T T C T T C C T C C
rs231623900
MGI SNP Detail		 Chr5:25825351 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 771 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs245391671
MGI SNP Detail		 Chr5:25825415 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 835 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213358329
MGI SNP Detail		 Chr5:25825422 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 842 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227875641
MGI SNP Detail		 Chr5:25825456 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 876 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246280743
MGI SNP Detail		 Chr5:25825471 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 891 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs218914281
MGI SNP Detail		 Chr5:25825494 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 914 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239413253
MGI SNP Detail		 Chr5:25825496 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 916 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261522448
MGI SNP Detail		 Chr5:25825514 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 934 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs48807023
MGI SNP Detail		 Chr5:25825572 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 992 bp distal
 SNP A/G A A A A A A G A A A A A A G A
rs232114380
MGI SNP Detail		 Chr5:25825581 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1001 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C
rs249741945
MGI SNP Detail		 Chr5:25825583 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1003 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs221498419
MGI SNP Detail		 Chr5:25825594 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1014 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs239392339
MGI SNP Detail		 Chr5:25825641 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1061 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs261057803
MGI SNP Detail		 Chr5:25825742 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1162 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs583271903
MGI SNP Detail		 Chr5:25825806 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1226 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs585788737
MGI SNP Detail		 Chr5:25825836 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1256 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A
rs226507021
MGI SNP Detail		 Chr5:25825863 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1283 bp distal
 SNP A/G A A G G G G G A G G G G G A G G G G A G G G G A G G G G G G G G G G G
rs242454383
MGI SNP Detail		 Chr5:25825873 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1293 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs264724354
MGI SNP Detail		 Chr5:25826075 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1495 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226916166
MGI SNP Detail		 Chr5:25826088 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1508 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs239296626
MGI SNP Detail		 Chr5:25826105 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1525 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs257212147
MGI SNP Detail		 Chr5:25826106 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1526 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227850249
MGI SNP Detail		 Chr5:25826112 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1532 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256972842
MGI SNP Detail		 Chr5:25826182 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1602 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs218930177
MGI SNP Detail		 Chr5:25826192 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1612 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs233811486
MGI SNP Detail		 Chr5:25826243 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1663 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs249719898
MGI SNP Detail		 Chr5:25826279 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1699 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs212101453
MGI SNP Detail		 Chr5:25826280 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1700 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs3160472
MGI SNP Detail		 Chr5:25826284 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm42235 within coordinates of
Gm46903 within coordinates of
Rr608546 1704 bp distal
 SNP A/G A G G G
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Showing SNP(s) 1 - 100 of 112
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/22/2025
MGI 6.24 		The Jackson Laboratory