Mouse SNP Summary

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.

SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs236922599 MGI SNP Detail Alliance Variant	Chr5:74853075	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1996 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs254049595 MGI SNP Detail Alliance Variant	Chr5:74853096	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1975 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	G	C
rs222805382 MGI SNP Detail Alliance Variant	Chr5:74853123	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1948 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs250232782 MGI SNP Detail Alliance Variant	Chr5:74853133	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1938 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs263597904 MGI SNP Detail Alliance Variant	Chr5:74853134	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1937 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs232604560 MGI SNP Detail Alliance Variant	Chr5:74853142	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1929 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs51404020 MGI SNP Detail Alliance Variant	Chr5:74853228	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1843 bp proximal	SNP	C/T		C			C	C		T		C			C								C					C	C			C					C	C				C		T												C
rs257863025 MGI SNP Detail Alliance Variant	Chr5:74853255	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1816 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs225225389 MGI SNP Detail Alliance Variant	Chr5:74853273	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1798 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs244092240 MGI SNP Detail Alliance Variant	Chr5:74853288	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1783 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs211811884 MGI SNP Detail Alliance Variant	Chr5:74853339	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1732 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs49025727 MGI SNP Detail Alliance Variant	Chr5:74853377	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1694 bp proximal	SNP	C/T		T			T	T		C		T			T								T					T	T			T					T	T				T		T												T
rs46804957 MGI SNP Detail Alliance Variant	Chr5:74853385	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613329 within coordinates of Rr613330 1686 bp proximal	SNP	A/G		A			G	G		G		G			G								G					G	G			G					G	G				G		G												G
rs50881404 MGI SNP Detail Alliance Variant	Chr5:74853430	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1641 bp proximal	SNP	G/T		G			G	G		T		G			G								T					G	G			G					G	G				G		T												G
rs46892094 MGI SNP Detail Alliance Variant	Chr5:74853454	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1617 bp proximal	SNP	A/G		A			A	A		G		A			A								G					A	A			A					A	A				A		G												A
rs250460264 MGI SNP Detail Alliance Variant	Chr5:74853479	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1592 bp proximal	SNP	A/G	A	A	A		A	A	A	G	G	A	A	G	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	G	A	A	G	A	A	A	G
rs50403644 MGI SNP Detail Alliance Variant	Chr5:74853498	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1573 bp proximal	SNP	C/T		T			T	T		T		T			T								C					T	T			T					T	T				T		T												T
rs230586500 MGI SNP Detail Alliance Variant	Chr5:74853533	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1538 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs248359236 MGI SNP Detail Alliance Variant	Chr5:74853537	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1534 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs51308146 MGI SNP Detail Alliance Variant	Chr5:74853622	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1449 bp proximal	SNP	C/T																										T						T																		C
rs33212427 MGI SNP Detail Alliance Variant	Chr5:74853630	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1441 bp proximal	SNP	A/G				A												A										G						G																		A
rs46573092 MGI SNP Detail Alliance Variant	Chr5:74853675	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1396 bp proximal	SNP	C/G		C			C	C		C		C			C								G					C	C			C					C	C				C		G												C
rs46376914 MGI SNP Detail Alliance Variant	Chr5:74853691	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1380 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			C					C	C				C		T												C
rs51786171 MGI SNP Detail Alliance Variant	Chr5:74853747	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1324 bp proximal	SNP	A/T		T			T	T		T		T			T								A					T	T			A					T	T				T		A												T
rs257899564 MGI SNP Detail Alliance Variant	Chr5:74853803	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1268 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs225259731 MGI SNP Detail Alliance Variant	Chr5:74853810	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1261 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs243806913 MGI SNP Detail Alliance Variant	Chr5:74853875	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1196 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs261456124 MGI SNP Detail Alliance Variant	Chr5:74853901	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1170 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs52209323 MGI SNP Detail Alliance Variant	Chr5:74853990	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1081 bp proximal	SNP	G/T				G	T																					T						T																		G
rs52489127 MGI SNP Detail Alliance Variant	Chr5:74854008	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1063 bp proximal	SNP	A/G				G	A																					A						A																		G
rs216839007 MGI SNP Detail Alliance Variant	Chr5:74854010	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1061 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs237539070 MGI SNP Detail Alliance Variant	Chr5:74854026	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1045 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs49463495 MGI SNP Detail Alliance Variant	Chr5:74854068	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 1003 bp proximal	SNP	C/G				C	G																					G						G																		C
rs213596465 MGI SNP Detail Alliance Variant	Chr5:74854172	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 899 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs46342722 MGI SNP Detail Alliance Variant	Chr5:74854272	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 799 bp proximal	SNP	A/T		T		T	A	T		A		T			A								A					A	A			T		A			T	T				T		A								T				T
rs48051065 MGI SNP Detail Alliance Variant	Chr5:74854289	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 782 bp proximal	SNP	C/T		T		T	C	T		C		T			C								C					C	C			T		C			T	T				T		C								T				T
rs226515686 MGI SNP Detail Alliance Variant	Chr5:74854335	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 736 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs242315713 MGI SNP Detail Alliance Variant	Chr5:74854428	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 643 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs259622050 MGI SNP Detail Alliance Variant	Chr5:74854455	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 616 bp proximal	SNP	A/G	A	A	A		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs224331039 MGI SNP Detail Alliance Variant	Chr5:74854489	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 582 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs47229557 MGI SNP Detail Alliance Variant	Chr5:74854492	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 579 bp proximal	SNP	A/T		A		A	T	A				A			T								A					T	T			A		T			A	A				A		A								A				A
rs48399481 MGI SNP Detail Alliance Variant	Chr5:74854514	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 557 bp proximal	SNP	A/G		G			A	G		A		G			A								G					A				G		A			G	G				G		G								G				G
rs47434490 MGI SNP Detail Alliance Variant	Chr5:74854517	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 554 bp proximal	SNP	C/T					T																					T						T																		C
rs48467944 MGI SNP Detail Alliance Variant	Chr5:74854574	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 497 bp proximal	SNP	A/G		G			G	G		G		G			G								A					G	G			A					G	G				G		G												G
rs51632865 MGI SNP Detail Alliance Variant	Chr5:74854587	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 484 bp proximal	SNP	A/C		A			C	A		C		A			C								A					C	C			A		C			A	A				A		A								A				A
rs48583687 MGI SNP Detail Alliance Variant	Chr5:74854597	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 474 bp proximal	SNP	A/G		G			G	G		G		G			G								A					G	G			A					G	G				G		G												G
rs48046678 MGI SNP Detail Alliance Variant	Chr5:74854628	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 443 bp proximal	SNP	A/G		A			A	A		A		A			A								G					A	A			G					A	A				A		A												A
rs46397874 MGI SNP Detail Alliance Variant	Chr5:74854674	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 397 bp proximal	SNP	C/T		T			C	T		C		T			C								C					C	C			C		C			T	T				T		C								T				T
rs48405977 MGI SNP Detail Alliance Variant	Chr5:74854687	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 384 bp proximal	SNP	C/T					C																											C																		T
rs51707178 MGI SNP Detail Alliance Variant	Chr5:74854696	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 375 bp proximal	SNP	A/G		G			A	G		A		G																A	A					A			G	G				G										G				G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs213323471 MGI SNP Detail Alliance Variant	Chr5:74854703	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 368 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	A		C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs46916480 MGI SNP Detail Alliance Variant	Chr5:74854726	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 345 bp proximal	SNP	A/G		A			G	A		G		A			G								G					G	G								A	A				A		G												A
rs46831629 MGI SNP Detail Alliance Variant	Chr5:74854808	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 263 bp proximal	SNP	A/T		T			A	T		A		T			A								T					A	A			T		A			T	T				T		T								T				T
rs242249689 MGI SNP Detail Alliance Variant	Chr5:74854812	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 259 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs218988403 MGI SNP Detail Alliance Variant	Chr5:74854814	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 257 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs239346532 MGI SNP Detail Alliance Variant	Chr5:74854818	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 253 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs263473938 MGI SNP Detail Alliance Variant	Chr5:74854820	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 251 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs215954833 MGI SNP Detail Alliance Variant	Chr5:74854822	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 249 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs47679130 MGI SNP Detail Alliance Variant	Chr5:74854853	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 218 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			T					C	C				C		C												C
rs50171602 MGI SNP Detail Alliance Variant	Chr5:74854935	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 136 bp proximal	SNP	C/T		C			C	C		C		C			C								C					C	C			T					C	C				C		C												C
rs49737993 MGI SNP Detail Alliance Variant	Chr5:74854947	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 124 bp proximal	SNP	A/C		A			A	A		A		A			A								C					A	A			C					A	A				A		C												A
rs218889412 MGI SNP Detail Alliance Variant	Chr5:74855006	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 65 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs237682726 MGI SNP Detail Alliance Variant	Chr5:74855056	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 15 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs46787284 MGI SNP Detail Alliance Variant	Chr5:74855127	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	C/G		C			C	C		C		C			C								C					C	C			C					C	C				C		G												C
rs226563519 MGI SNP Detail Alliance Variant	Chr5:74855129	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs246709663 MGI SNP Detail Alliance Variant	Chr5:74855139	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs46060279 MGI SNP Detail Alliance Variant	Chr5:74855149	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs47087203 MGI SNP Detail Alliance Variant	Chr5:74855160	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	C/G		C		C	C	G		C		G			C								C					C	C			C		C			G	G				G		C								G				G
rs47491360 MGI SNP Detail Alliance Variant	Chr5:74855205	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs47817255 MGI SNP Detail Alliance Variant	Chr5:74855235	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	C/T		C				C				C			C								T						C			C					C	C				C		C												C
rs33380661 MGI SNP Detail Alliance Variant	Chr5:74855236	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	A/G		G		G	G	A		G		A			G			A										G	G			G		G			A	A				A		A								A				A
rs47374067 MGI SNP Detail Alliance Variant	Chr5:74855277	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	G/T		T			T	T		T		T			T								T					T	T			T					T	T				T		G												T
rs219126921 MGI SNP Detail Alliance Variant	Chr5:74855321	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs234008574 MGI SNP Detail Alliance Variant	Chr5:74855414	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs45661770 MGI SNP Detail Alliance Variant	Chr5:74855470	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	A/G		G			G	G		G		G			G								G					G	G			A					G	G				G		G												G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs253053281 MGI SNP Detail Alliance Variant	Chr5:74855504	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs215967697 MGI SNP Detail Alliance Variant	Chr5:74855542	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs29776410 MGI SNP Detail Alliance Variant	Chr5:74855605	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	C/T		T		T	C	T		C		T			C			T					C					C	C			C		C			T	T				T										T				T
rs50883719 MGI SNP Detail Alliance Variant	Chr5:74855613	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 within coordinates of	SNP	G/T		G			G	G		G		G			G								G					G	G			G					G	G				G		T												G
rs49001174 MGI SNP Detail Alliance Variant	Chr5:74855692	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 48 bp distal	SNP	A/G		A		A	G	A		G		A			G								G					G	G			G		G			A	A				A		A								A				A
rs229936382 MGI SNP Detail Alliance Variant	Chr5:74855722	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 78 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs46155419 MGI SNP Detail Alliance Variant	Chr5:74855731	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 87 bp distal	SNP	A/G		G		G	A	G		A		G			A								G					A	A			G		A			G	G				G		G								G				G
rs226213362 MGI SNP Detail Alliance Variant	Chr5:74855737	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 93 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs241524681 MGI SNP Detail Alliance Variant	Chr5:74855766	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 122 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs258925507 MGI SNP Detail Alliance Variant	Chr5:74855843	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 199 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs47380426 MGI SNP Detail Alliance Variant	Chr5:74855952	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 308 bp distal	SNP	G/T		T			T	T		T		T			T								T					T	T			G					T	T				T		T												T
rs49158852 MGI SNP Detail Alliance Variant	Chr5:74855992	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 348 bp distal	SNP	A/G		A			G	A		G		A			G								G					G	G			G		G			A	A				A		G								A				A
rs238209944 MGI SNP Detail Alliance Variant	Chr5:74855994	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 350 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs51775881 MGI SNP Detail Alliance Variant	Chr5:74856061	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 417 bp distal	SNP	A/G		A			G	A		G		A			G													G	G			G		G			A	A				A		G								A				A
rs49790045 MGI SNP Detail Alliance Variant	Chr5:74856062	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 418 bp distal	SNP	C/T		T			T	T		T		T			T								C					T	T			T					T	T				T		T												T
rs50436352 MGI SNP Detail Alliance Variant	Chr5:74856090	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 446 bp distal	SNP	A/G		A			A	A		A		A			A								A					A	A			A					A	A				A		G												A
rs266040517 MGI SNP Detail Alliance Variant	Chr5:74856093	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 449 bp distal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T		G	T	T	T	T	T	T	T	G	T	T	T	T
rs46278764 MGI SNP Detail Alliance Variant	Chr5:74856110	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 466 bp distal	SNP	C/T		T			T	T		T		T			T								T					T	T			C					T	T				T		C												T
rs50618054 MGI SNP Detail Alliance Variant	Chr5:74856135	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 491 bp distal	SNP	A/T		T			T	T		T		T			T								A					T	T			A					T	T				T		A												T
rs579133760 MGI SNP Detail Alliance Variant	Chr5:74856164	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 520 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs259014515 MGI SNP Detail Alliance Variant	Chr5:74856196	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 552 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A	A	G	A	A	A	A
rs226426533 MGI SNP Detail Alliance Variant	Chr5:74856223	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 579 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	G	G	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A	A	G	A	A	A	A
rs245199365 MGI SNP Detail Alliance Variant	Chr5:74856249	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 605 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs46369091 MGI SNP Detail Alliance Variant	Chr5:74856259	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 615 bp distal	SNP	C/T				C	T																					T						T																		C
rs230014804 MGI SNP Detail Alliance Variant	Chr5:74856267	Lnx1 Intron Lnx1 Noncoding-Transcript-Variant Rr613330 623 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G