Rr621989 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr621989
regulatory region 621989
MGI:8084121

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs233025708 MGI SNP Detail Alliance Variant	Chr5:134340619	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 2000 bp proximal	SNP	C/G	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C
rs252129394 MGI SNP Detail Alliance Variant	Chr5:134340663	Gtf2i Intron Gtf2i mRNA-UTR Gtf2i Splice-Site Rr621989 1956 bp proximal	SNP	A/G	A	A	A			G	G		A	A	A	A	G	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	G	G	G	G		G	A	A	G		A	A	A	A	A	A	G	A	A	A	A	A	G	A	G	G	A	G	G
rs222079503 MGI SNP Detail Alliance Variant	Chr5:134340671	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1948 bp proximal	SNP	A/C	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A
rs247363062 MGI SNP Detail Alliance Variant	Chr5:134340676	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1943 bp proximal	SNP	A/G	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs578818767 MGI SNP Detail Alliance Variant	Chr5:134340752	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1867 bp proximal	SNP	C/T	T	T	T			T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
rs266102416 MGI SNP Detail Alliance Variant	Chr5:134340755	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1864 bp proximal	SNP	C/T	C	C	C			T	T		C	C	C	C	T	C	C	C	C	C	C	C	C	C	T	C	C	T	C	C	T	T	T	C	C	T	C	C	T		C	C	C	C	C	C	T	C	C	C	C	C	T	C	C	T	C	T	T
rs220391540 MGI SNP Detail Alliance Variant	Chr5:134340779	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1840 bp proximal	SNP	C	C	C							C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C		C	C			C	C	C		C	C			C	C	C	C	C	C		C	C	C	C	C		C	C		C
rs244967718 MGI SNP Detail Alliance Variant	Chr5:134340780	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1839 bp proximal	SNP	A/C	A	A	A						A	A	A	A		A	A	A	A	A	A	A	A	A		A	A	A	A	A				A	A		A	A	A		A	A	A	A	A	A	A	A	A	A	A	A		A		C	A
rs257244233 MGI SNP Detail Alliance Variant	Chr5:134340811	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1808 bp proximal	SNP	A/C/T	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	T		C	C	C	C	C	C	T	C	C	C	C	C	C	C	A	C	C	C	C
rs13486229 MGI SNP Detail Alliance Variant	Chr5:134340825	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1794 bp proximal	SNP	A/C/G				C		G		G		G	G																														G												A
rs246141908 MGI SNP Detail Alliance Variant	Chr5:134340856	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1763 bp proximal	SNP	A/T	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	T	A	A	A	A	A	T		A	A	A	A	A	A	T	A	A	A	A	A	A	A	A	A	A	A	A
rs13486230 MGI SNP Detail Alliance Variant	Chr5:134340884	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1735 bp proximal	SNP	A/T				T	T	T	T	T		T	T																	T													T												A
rs13496588 MGI SNP Detail Alliance Variant	Chr5:134340989	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1630 bp proximal	SNP	C/G				C		G		C		C	C																	C						G							C											C	C
rs254986850 MGI SNP Detail Alliance Variant	Chr5:134341003	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1616 bp proximal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs212533607 MGI SNP Detail Alliance Variant	Chr5:134341007	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1612 bp proximal	SNP	C/T	T	T	T			T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs582429559 MGI SNP Detail Alliance Variant	Chr5:134341047	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1572 bp proximal	SNP	A/T	T	T	T			T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T
rs235814122 MGI SNP Detail Alliance Variant	Chr5:134341077	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1542 bp proximal	SNP	A/G	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A		A	A	A	G		A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A
rs244146124 MGI SNP Detail Alliance Variant	Chr5:134341158	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1461 bp proximal	SNP	A/C	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C
rs214756374 MGI SNP Detail Alliance Variant	Chr5:134341165	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1454 bp proximal	SNP	C/T	T	T	T			T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs232945219 MGI SNP Detail Alliance Variant	Chr5:134341184	Gtf2i Intron Gtf2i mRNA-UTR Rr621987 within coordinates of Rr621989 1435 bp proximal	SNP	A/T	T	T	T			T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T
rs252006338 MGI SNP Detail Alliance Variant	Chr5:134341264	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1355 bp proximal	SNP	A/G	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs226003843 MGI SNP Detail Alliance Variant	Chr5:134341310	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1309 bp proximal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs13486231 MGI SNP Detail Alliance Variant	Chr5:134341316	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1303 bp proximal	SNP	A/G				G	A	A	A	G		G	G																	G						A							G											G
rs260806148 MGI SNP Detail Alliance Variant	Chr5:134341320	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1299 bp proximal	SNP	G/T	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G
rs219905457 MGI SNP Detail Alliance Variant	Chr5:134341369	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1250 bp proximal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs237924956 MGI SNP Detail Alliance Variant	Chr5:134341370	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1249 bp proximal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs29548192 MGI SNP Detail Alliance Variant	Chr5:134341372	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1247 bp proximal	SNP	A/G				G		A																						G						A																		G
rs220258680 MGI SNP Detail Alliance Variant	Chr5:134341385	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1234 bp proximal	SNP	A/G	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs29542283 MGI SNP Detail Alliance Variant	Chr5:134341422	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1197 bp proximal	SNP	A/G				G		A																						G
rs585790396 MGI SNP Detail Alliance Variant	Chr5:134341426	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1193 bp proximal	SNP	A	A	A	A						A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A			A	A			A	A	A		A	A	A	A	A	A	A	A	A	A	A	A			A		A
rs581820822 MGI SNP Detail Alliance Variant	Chr5:134341427	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1192 bp proximal	SNP	A/G		G							G	G	G	G	A		G	G	G	G	G	G		G		G	G	A	G	G		A	G	G			G	G				G	G	G		G		G	G	G	G	G					G
rs240241146 MGI SNP Detail Alliance Variant	Chr5:134341464	Gtf2i Intron Gtf2i mRNA-UTR Rr621989 1155 bp proximal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs259555266 MGI SNP Detail Alliance Variant	Chr5:134341482	Gtf2i Intron Gtf2i mRNA-UTR Rr621988 within coordinates of Rr621989 1137 bp proximal	SNP	A/C	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A
rs232914133 MGI SNP Detail Alliance Variant	Chr5:134341597	Gtf2i Intron Gtf2i mRNA-UTR Rr621988 within coordinates of Rr621989 1022 bp proximal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G
rs259860480 MGI SNP Detail Alliance Variant	Chr5:134341628	Gtf2i Intron Gtf2i mRNA-UTR Rr621988 within coordinates of Rr621989 991 bp proximal	SNP	C/T	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C
rs261685594 MGI SNP Detail Alliance Variant	Chr5:134341895	Gtf2i Intron Gtf2i mRNA-UTR Rr621988 within coordinates of Rr621989 724 bp proximal	SNP	C/T	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs582776669 MGI SNP Detail Alliance Variant	Chr5:134342102	Gtf2i Intron Gtf2i mRNA-UTR Rr621988 within coordinates of Rr621989 517 bp proximal	SNP	A/G	A	A	A						A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A		A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	G	A		G	A		A
rs229610109 MGI SNP Detail Alliance Variant	Chr5:134342169	Gtf2i Intron Gtf2i mRNA-UTR Rr621988 within coordinates of Rr621989 450 bp proximal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs244062340 MGI SNP Detail Alliance Variant	Chr5:134342176	Gtf2i Intron Gtf2i mRNA-UTR Rr621988 within coordinates of Rr621989 443 bp proximal	SNP	A/T	T	T	T			T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T
rs227353189 MGI SNP Detail Alliance Variant	Chr5:134342275	Cpgi16718 within coordinates of Gm71761 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr621988 within coordinates of Rr621989 344 bp proximal	SNP	A/C																																		C																		A
rs248776814 MGI SNP Detail Alliance Variant	Chr5:134342358	Cpgi16718 within coordinates of Gm71761 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr399401 within coordinates of Rr621988 within coordinates of Rr621989 261 bp proximal	SNP	A/T																																		T																		A
rs246061498 MGI SNP Detail Alliance Variant	Chr5:134342384	Cpgi16718 within coordinates of Gm71761 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr399401 within coordinates of Rr621988 within coordinates of Rr621989 235 bp proximal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G
rs586466139 MGI SNP Detail Alliance Variant	Chr5:134342590	Cpgi16718 within coordinates of Gm71761 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr399401 within coordinates of Rr621988 within coordinates of Rr621989 29 bp proximal	SNP	A/C	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		C	A	A	A	A
rs218141523 MGI SNP Detail Alliance Variant	Chr5:134342629	Cpgi16718 within coordinates of Gm71761 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr621989 within coordinates of	SNP	C/G	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		G	C	C	C	C
rs240511623 MGI SNP Detail Alliance Variant	Chr5:134342630	Cpgi16718 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr621989 within coordinates of	SNP	G/T	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		T	G	G	G	G
rs13496589 MGI SNP Detail Alliance Variant	Chr5:134342758	Cpgi16718 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr621989 within coordinates of	SNP	A/C				A	A	A	A	A		A	A																	A													A												C
rs212984658 MGI SNP Detail Alliance Variant	Chr5:134342786	Cpgi16718 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr621989 within coordinates of	SNP	G/T	G	G	G				G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G		G	G	T		G	G	G	G	G	G	T	G	G	G	G	G	G		G	G	G	G	G
rs230526817 MGI SNP Detail Alliance Variant	Chr5:134342960	Cpgi16718 within coordinates of Gtf2i Intron Rr621989 within coordinates of	SNP	A/C	A	A	A			A	A		A		A	A	A	A	A	A	A	A	A	A	A	A	C	A		C	A	A	A	A	A	A		A	A		C		A		A	A	A	A	C	A		A	A	A	A		C	A	A	A	A
rs251102823 MGI SNP Detail Alliance Variant	Chr5:134343032	Cpgi16718 within coordinates of Gtf2i Intron Rr621989 within coordinates of	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G
rs220268654 MGI SNP Detail Alliance Variant	Chr5:134343113	Cpgi16718 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr621989 within coordinates of	SNP	A/G	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs240459115 MGI SNP Detail Alliance Variant	Chr5:134343209	Cpgi16718 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr621989 90 bp distal	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G			G	G	A		G	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G
rs259119819 MGI SNP Detail Alliance Variant	Chr5:134343449	Cpgi16718 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Rr621989 330 bp distal	SNP	A/G		G				G	G		G		G	G	G		G	G	G	G	G	G	G	G	A	G		A		G	G	G	G	A		G	G	G			G	G		G	G	G		G	G	G	G	G	G	G	G	G	G	G
rs216410426 MGI SNP Detail Alliance Variant	Chr5:134343470	Cpgi16718 within coordinates of Gtf2i Intron Gtf2i mRNA-UTR Gtf2i Splice-Site Rr621989 351 bp distal	SNP	A/G																																		G																		A
rs579473259 MGI SNP Detail Alliance Variant	Chr5:134343521	Cpgi16718 within coordinates of Gtf2i mRNA-UTR Rr621989 402 bp distal Tssr53637 within coordinates of	SNP	C/T	C	C				C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs224651809 MGI SNP Detail Alliance Variant	Chr5:134343552	Cpgi16718 within coordinates of Gtf2i mRNA-UTR Rr621989 433 bp distal Rr621990 within coordinates of Tssr53638 within coordinates of	SNP	C																																		C																		C
rs264560769 MGI SNP Detail Alliance Variant	Chr5:134343633	Cpgi16718 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 514 bp distal Rr621990 within coordinates of	SNP	C	C	C				C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C
rs243177803 MGI SNP Detail Alliance Variant	Chr5:134343786	Cpgi16718 within coordinates of Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 667 bp distal Rr621991 within coordinates of	SNP	A/C																																		A																		C
rs237897335 MGI SNP Detail Alliance Variant	Chr5:134343787	Cpgi16718 within coordinates of Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 668 bp distal Rr621991 within coordinates of	SNP	C/T	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C		C	C	C	C	C	C	C	C	C	T	C	C	C	C	T	C	C	C	C
rs33082291 MGI SNP Detail Alliance Variant	Chr5:134344028	Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 909 bp distal Rr621991 within coordinates of	SNP	A/G		A		A		G												A																G																		A
rs227178481 MGI SNP Detail Alliance Variant	Chr5:134344185	Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1066 bp distal Rr621991 within coordinates of	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A		G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G
rs13486232 MGI SNP Detail Alliance Variant	Chr5:134344269	Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1150 bp distal Rr621991 within coordinates of	SNP	A/C				A	A	A	A	A		A	A																	A													A												C
rs218551250 MGI SNP Detail Alliance Variant	Chr5:134344314	Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1195 bp distal Rr621991 within coordinates of	SNP	A/G	A	A	A			A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs13486233 MGI SNP Detail Alliance Variant	Chr5:134344428	Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1309 bp distal Rr621991 within coordinates of	SNP	A/T		A		A	T	T	T	A		A	A							A										A						T							A											A	T
rs249179915 MGI SNP Detail Alliance Variant	Chr5:134344467	Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1348 bp distal Rr621991 within coordinates of	SNP	C/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G
rs213515639 MGI SNP Detail Alliance Variant	Chr5:134344468	Gm71534 within coordinates of Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1349 bp distal Rr621991 within coordinates of	SNP	A/G	G	G	G			G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs231924329 MGI SNP Detail Alliance Variant	Chr5:134344524	Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1405 bp distal Rr621991 within coordinates of	SNP	C/T	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C
rs251115097 MGI SNP Detail Alliance Variant	Chr5:134344543	Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1424 bp distal Rr621991 within coordinates of	SNP	C/G	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C
rs13496590 MGI SNP Detail Alliance Variant	Chr5:134344833	Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1714 bp distal Rr621991 within coordinates of	SNP	C/G				G	G	G	G	G		G	G																	G													G												C
rs29547496 MGI SNP Detail Alliance Variant	Chr5:134344985	Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1866 bp distal Rr621991 within coordinates of	SNP	A/C				C		A												C										C						A				A														C
rs233901880 MGI SNP Detail Alliance Variant	Chr5:134345057	Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1938 bp distal Rr621991 within coordinates of	SNP	C/G	C	C	C			C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
rs13486234 MGI SNP Detail Alliance Variant	Chr5:134345070	Gtf2i mRNA-UTR Rr378666 within coordinates of Rr621989 1951 bp distal Rr621991 within coordinates of	SNP	A/G				G	G	G	G	G		G	G																	G													G												A

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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