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Mouse SNP Summary
Symbol
Name
ID
Rr626090
regulatory region 626090
MGI:8088222

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257008793
MGI SNP Detail
Alliance Variant
Chr6:5093434 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1959 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220275344
MGI SNP Detail
Alliance Variant
Chr6:5093514 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626089 within coordinates of
Rr626090 1879 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229786156
MGI SNP Detail
Alliance Variant
Chr6:5093629 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626089 within coordinates of
Rr626090 1764 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250287796
MGI SNP Detail
Alliance Variant
Chr6:5093678 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626089 within coordinates of
Rr626090 1715 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs222567023
MGI SNP Detail
Alliance Variant
Chr6:5093734 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626089 within coordinates of
Rr626090 1659 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247623229
MGI SNP Detail
Alliance Variant
Chr6:5093867 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626089 within coordinates of
Rr626090 1526 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264337565
MGI SNP Detail
Alliance Variant
Chr6:5093906 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626089 within coordinates of
Rr626090 1487 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224242189
MGI SNP Detail
Alliance Variant
Chr6:5093997 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1396 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249207312
MGI SNP Detail
Alliance Variant
Chr6:5094064 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1329 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255781484
MGI SNP Detail
Alliance Variant
Chr6:5094069 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1324 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226456017
MGI SNP Detail
Alliance Variant
Chr6:5094072 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1321 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236293081
MGI SNP Detail
Alliance Variant
Chr6:5094113 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1280 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254848126
MGI SNP Detail
Alliance Variant
Chr6:5094171 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1222 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234425265
MGI SNP Detail
Alliance Variant
Chr6:5094202 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1191 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254485718
MGI SNP Detail
Alliance Variant
Chr6:5094214 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1179 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32474304
MGI SNP Detail
Alliance Variant
Chr6:5094247 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1146 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232056535
MGI SNP Detail
Alliance Variant
Chr6:5094343 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1050 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs254853252
MGI SNP Detail
Alliance Variant
Chr6:5094357 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1036 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214118608
MGI SNP Detail
Alliance Variant
Chr6:5094406 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 987 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32474305
MGI SNP Detail
Alliance Variant
Chr6:5094459 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 934 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs32474306
MGI SNP Detail
Alliance Variant
Chr6:5094492 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 901 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs32474307
MGI SNP Detail
Alliance Variant
Chr6:5094579 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 814 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A G G
rs242907156
MGI SNP Detail
Alliance Variant
Chr6:5094595 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 798 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260989618
MGI SNP Detail
Alliance Variant
Chr6:5094602 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 791 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224438272
MGI SNP Detail
Alliance Variant
Chr6:5094604 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 789 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246473111
MGI SNP Detail
Alliance Variant
Chr6:5094610 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 783 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580984580
MGI SNP Detail
Alliance Variant
Chr6:5094657 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 736 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578941148
MGI SNP Detail
Alliance Variant
Chr6:5094659 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 734 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32474308
MGI SNP Detail
Alliance Variant
Chr6:5094677 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 716 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs32474309
MGI SNP Detail
Alliance Variant
Chr6:5094698 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 695 bp proximal
SNP C/G/T C C C C C C C C C C C C C C C C C C C G C C T C C C C T C C C C C C C C C C C C T C C C C C C C G C C C C
rs32474310
MGI SNP Detail
Alliance Variant
Chr6:5094909 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 484 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs32474311
MGI SNP Detail
Alliance Variant
Chr6:5094949 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 444 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs233325248
MGI SNP Detail
Alliance Variant
Chr6:5095021 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 372 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251763009
MGI SNP Detail
Alliance Variant
Chr6:5095029 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 364 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs32474312
MGI SNP Detail
Alliance Variant
Chr6:5095055 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 338 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232792068
MGI SNP Detail
Alliance Variant
Chr6:5095086 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 307 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32474313
MGI SNP Detail
Alliance Variant
Chr6:5095089 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 304 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs32475104
MGI SNP Detail
Alliance Variant
Chr6:5095124 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 269 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs223963544
MGI SNP Detail
Alliance Variant
Chr6:5095125 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 268 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244208471
MGI SNP Detail
Alliance Variant
Chr6:5095145 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 248 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218093608
MGI SNP Detail
Alliance Variant
Chr6:5095149 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 244 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32475105
MGI SNP Detail
Alliance Variant
Chr6:5095154 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 239 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262843834
MGI SNP Detail
Alliance Variant
Chr6:5095160 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 233 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216562919
MGI SNP Detail
Alliance Variant
Chr6:5095193 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 200 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241292419
MGI SNP Detail
Alliance Variant
Chr6:5095325 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 68 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs249912624
MGI SNP Detail
Alliance Variant
Chr6:5095339 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 54 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs220087586
MGI SNP Detail
Alliance Variant
Chr6:5095374 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 19 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32475106
MGI SNP Detail
Alliance Variant
Chr6:5095490 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs249235193
MGI SNP Detail
Alliance Variant
Chr6:5095513 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226675138
MGI SNP Detail
Alliance Variant
Chr6:5095537 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32475107
MGI SNP Detail
Alliance Variant
Chr6:5095541 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs265573022
MGI SNP Detail
Alliance Variant
Chr6:5095654 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32475108
MGI SNP Detail
Alliance Variant
Chr6:5095803 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs238622745
MGI SNP Detail
Alliance Variant
Chr6:5095805 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258126954
MGI SNP Detail
Alliance Variant
Chr6:5095813 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32475109
MGI SNP Detail
Alliance Variant
Chr6:5095829 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs243986843
MGI SNP Detail
Alliance Variant
Chr6:5095831 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263993470
MGI SNP Detail
Alliance Variant
Chr6:5095890 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 43 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs234932262
MGI SNP Detail
Alliance Variant
Chr6:5095972 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 125 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252279561
MGI SNP Detail
Alliance Variant
Chr6:5096057 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 210 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32475110
MGI SNP Detail
Alliance Variant
Chr6:5096071 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 224 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs32475111
MGI SNP Detail
Alliance Variant
Chr6:5096126 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 279 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs32475112
MGI SNP Detail
Alliance Variant
Chr6:5096150 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 303 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214584703
MGI SNP Detail
Alliance Variant
Chr6:5096172 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 325 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs32475113
MGI SNP Detail
Alliance Variant
Chr6:5096177 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 330 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs248971158
MGI SNP Detail
Alliance Variant
Chr6:5096230 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 383 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225867123
MGI SNP Detail
Alliance Variant
Chr6:5096261 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 414 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs243492356
MGI SNP Detail
Alliance Variant
Chr6:5096313 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 466 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259051970
MGI SNP Detail
Alliance Variant
Chr6:5096320 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 473 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225470351
MGI SNP Detail
Alliance Variant
Chr6:5096323 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 476 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239191316
MGI SNP Detail
Alliance Variant
Chr6:5096457 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 610 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258089090
MGI SNP Detail
Alliance Variant
Chr6:5096532 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 685 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217970518
MGI SNP Detail
Alliance Variant
Chr6:5096542 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 695 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32475834
MGI SNP Detail
Alliance Variant
Chr6:5096567 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 720 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265833785
MGI SNP Detail
Alliance Variant
Chr6:5096570 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 723 bp distal
SNP A/G A A A A A A A A A A G G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32475835
MGI SNP Detail
Alliance Variant
Chr6:5096625 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 778 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs257222519
MGI SNP Detail
Alliance Variant
Chr6:5096628 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 781 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263560447
MGI SNP Detail
Alliance Variant
Chr6:5096637 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 790 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32475836
MGI SNP Detail
Alliance Variant
Chr6:5096695 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 848 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32475837
MGI SNP Detail
Alliance Variant
Chr6:5096807 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 960 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A T A A A A A A A T A A A A
rs211972114
MGI SNP Detail
Alliance Variant
Chr6:5096868 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1021 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223633043
MGI SNP Detail
Alliance Variant
Chr6:5096876 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1029 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250114678
MGI SNP Detail
Alliance Variant
Chr6:5096887 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1040 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32475838
MGI SNP Detail
Alliance Variant
Chr6:5096955 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1108 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240395687
MGI SNP Detail
Alliance Variant
Chr6:5096973 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1126 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32475839
MGI SNP Detail
Alliance Variant
Chr6:5096983 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1136 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs32475840
MGI SNP Detail
Alliance Variant
Chr6:5096984 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1137 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232082219
MGI SNP Detail
Alliance Variant
Chr6:5097073 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1226 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252295528
MGI SNP Detail
Alliance Variant
Chr6:5097083 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1236 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs218428250
MGI SNP Detail
Alliance Variant
Chr6:5097101 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1254 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237828354
MGI SNP Detail
Alliance Variant
Chr6:5097131 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1284 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260084716
MGI SNP Detail
Alliance Variant
Chr6:5097139 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1292 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226711865
MGI SNP Detail
Alliance Variant
Chr6:5097145 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1298 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244782131
MGI SNP Detail
Alliance Variant
Chr6:5097148 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1301 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265697930
MGI SNP Detail
Alliance Variant
Chr6:5097237 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1390 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs32475841
MGI SNP Detail
Alliance Variant
Chr6:5097239 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1392 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs32475842
MGI SNP Detail
Alliance Variant
Chr6:5097297 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1450 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253784334
MGI SNP Detail
Alliance Variant
Chr6:5097326 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1479 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224274923
MGI SNP Detail
Alliance Variant
Chr6:5097329 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1482 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254363017
MGI SNP Detail
Alliance Variant
Chr6:5097336 Ppp1r9a Intron
Ppp1r9a Noncoding-Transcript-Variant
Rr626090 1489 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 122

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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