About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr626466
regulatory region 626466
MGI:8088598

<< first < prev1 next > last >>
Showing SNP(s) 1 - 70 of 70

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260365418
MGI SNP Detail
Alliance Variant
Chr6:9147902 Nxph1 Intron
Rr626466 1960 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33348556
MGI SNP Detail
Alliance Variant
Chr6:9147925 Nxph1 Intron
Rr626466 1937 bp proximal
SNP A/G G G A A G A A G A G G A G G A G A
rs230893411
MGI SNP Detail
Alliance Variant
Chr6:9147927 Nxph1 Intron
Rr626466 1935 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243564860
MGI SNP Detail
Alliance Variant
Chr6:9147963 Nxph1 Intron
Rr626466 1899 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214478490
MGI SNP Detail
Alliance Variant
Chr6:9148000 Nxph1 Intron
Rr626466 1862 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232188992
MGI SNP Detail
Alliance Variant
Chr6:9148214 Nxph1 Intron
Rr626466 1648 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253994732
MGI SNP Detail
Alliance Variant
Chr6:9148249 Nxph1 Intron
Rr626466 1613 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216501366
MGI SNP Detail
Alliance Variant
Chr6:9148281 Nxph1 Intron
Rr626466 1581 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240635429
MGI SNP Detail
Alliance Variant
Chr6:9148327 Nxph1 Intron
Rr626466 1535 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264076238
MGI SNP Detail
Alliance Variant
Chr6:9148354 Nxph1 Intron
Rr626466 1508 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225508317
MGI SNP Detail
Alliance Variant
Chr6:9148366 Nxph1 Intron
Rr626466 1496 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs236474359
MGI SNP Detail
Alliance Variant
Chr6:9148368 Nxph1 Intron
Rr626466 1494 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs247833709
MGI SNP Detail
Alliance Variant
Chr6:9148436 Nxph1 Intron
Rr626466 1426 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219827569
MGI SNP Detail
Alliance Variant
Chr6:9148437 Nxph1 Intron
Rr626466 1425 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33348557
MGI SNP Detail
Alliance Variant
Chr6:9148467 Nxph1 Intron
Rr626466 1395 bp proximal
SNP G/T T T T T T T T T T T T T T G T
rs263580017
MGI SNP Detail
Alliance Variant
Chr6:9148478 Nxph1 Intron
Rr626466 1384 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33348558
MGI SNP Detail
Alliance Variant
Chr6:9148497 Nxph1 Intron
Rr626466 1365 bp proximal
SNP A/G A A A A A A A A A A A A G A
rs248186692
MGI SNP Detail
Alliance Variant
Chr6:9148588 Nxph1 Intron
Rr626466 1274 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265895663
MGI SNP Detail
Alliance Variant
Chr6:9148657 Nxph1 Intron
Rr626466 1205 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs225104479
MGI SNP Detail
Alliance Variant
Chr6:9148683 Nxph1 Intron
Rr626466 1179 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243690909
MGI SNP Detail
Alliance Variant
Chr6:9148724 Nxph1 Intron
Rr626466 1138 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33348560
MGI SNP Detail
Alliance Variant
Chr6:9148735 Nxph1 Intron
Rr626466 1127 bp proximal
SNP C/T C C C C C C T C C C T C C C C
rs29966718
MGI SNP Detail
Alliance Variant
Chr6:9148911 Nxph1 Intron
Rr626466 951 bp proximal
SNP G/T G G G T T G T T G G T G G G G G G G T
rs33348563
MGI SNP Detail
Alliance Variant
Chr6:9148981 Nxph1 Intron
Rr626466 881 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs586209879
MGI SNP Detail
Alliance Variant
Chr6:9149054 Nxph1 Intron
Rr626466 808 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580480084
MGI SNP Detail
Alliance Variant
Chr6:9149074 Nxph1 Intron
Rr626466 788 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216202825
MGI SNP Detail
Alliance Variant
Chr6:9149168 Nxph1 Intron
Rr626466 694 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243522870
MGI SNP Detail
Alliance Variant
Chr6:9149208 Nxph1 Intron
Rr626466 654 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33349685
MGI SNP Detail
Alliance Variant
Chr6:9149209 Nxph1 Intron
Rr626466 653 bp proximal
SNP C/T T T T T T T C T T T C T T T T
rs213602576
MGI SNP Detail
Alliance Variant
Chr6:9149224 Nxph1 Intron
Rr626466 638 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30315590
MGI SNP Detail
Alliance Variant
Chr6:9149322 Nxph1 Intron
Rr626466 540 bp proximal
SNP C/T C C C T T C T T T C T C C T C C T C T
rs248005936
MGI SNP Detail
Alliance Variant
Chr6:9149340 Nxph1 Intron
Rr626466 522 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219772859
MGI SNP Detail
Alliance Variant
Chr6:9149342 Nxph1 Intron
Rr626466 520 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs29833187
MGI SNP Detail
Alliance Variant
Chr6:9149572 Nxph1 Intron
Rr626466 290 bp proximal
SNP A/G G G G A A G A A G G A G G G G G G G A
rs33349688
MGI SNP Detail
Alliance Variant
Chr6:9149631 Nxph1 Intron
Rr626466 231 bp proximal
SNP G/T G G G G G G T G G G T G G G G
rs224160520
MGI SNP Detail
Alliance Variant
Chr6:9149699 Nxph1 Intron
Rr626466 163 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251279164
MGI SNP Detail
Alliance Variant
Chr6:9149795 Nxph1 Intron
Rr626466 67 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263934682
MGI SNP Detail
Alliance Variant
Chr6:9149809 Nxph1 Intron
Rr626466 53 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33349690
MGI SNP Detail
Alliance Variant
Chr6:9149933 Nxph1 Intron
Rr626466 within coordinates of
SNP A/C C C C C C C C C C C A C C C C
rs224905966
MGI SNP Detail
Alliance Variant
Chr6:9150379 Nxph1 Intron
Rr626466 305 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237375959
MGI SNP Detail
Alliance Variant
Chr6:9150421 Nxph1 Intron
Rr626466 347 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs258536397
MGI SNP Detail
Alliance Variant
Chr6:9150537 Nxph1 Intron
Rr626466 463 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33349692
MGI SNP Detail
Alliance Variant
Chr6:9150629 Nxph1 Intron
Rr626466 555 bp distal
SNP C/G G G G G G G C G G G C G G G G
rs253208986
MGI SNP Detail
Alliance Variant
Chr6:9150690 Nxph1 Intron
Rr626466 616 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs33350764
MGI SNP Detail
Alliance Variant
Chr6:9150780 Nxph1 Intron
Rr626466 706 bp distal
SNP C/G C C C C C C G C C C G C C G C
rs583670488
MGI SNP Detail
Alliance Variant
Chr6:9150836 Nxph1 Intron
Rr626466 762 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs586197980
MGI SNP Detail
Alliance Variant
Chr6:9150857 Nxph1 Intron
Rr626466 783 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs234187207
MGI SNP Detail
Alliance Variant
Chr6:9150941 Nxph1 Intron
Rr626466 867 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A
rs33350766
MGI SNP Detail
Alliance Variant
Chr6:9151005 Nxph1 Intron
Rr626466 931 bp distal
SNP C/T T T T T T T C T T T C T T T T
rs33350768
MGI SNP Detail
Alliance Variant
Chr6:9151128 Nxph1 Intron
Rr626466 1054 bp distal
SNP C/G C C C C C C G C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33350770
MGI SNP Detail
Alliance Variant
Chr6:9151212 Nxph1 Intron
Rr626466 1138 bp distal
SNP A/T T T T T T T T T T A T T T T
rs242088529
MGI SNP Detail
Alliance Variant
Chr6:9151230 Nxph1 Intron
Rr626466 1156 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs30565066
MGI SNP Detail
Alliance Variant
Chr6:9151239 Nxph1 Intron
Rr626466 1165 bp distal
SNP A/G A G A A A
rs580266957
MGI SNP Detail
Alliance Variant
Chr6:9151242 Nxph1 Intron
Rr626466 1168 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237797778
MGI SNP Detail
Alliance Variant
Chr6:9151529 Nxph1 Intron
Rr626466 1455 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259061378
MGI SNP Detail
Alliance Variant
Chr6:9151557 Nxph1 Intron
Rr626466 1483 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33350772
MGI SNP Detail
Alliance Variant
Chr6:9151575 Nxph1 Intron
Rr626466 1501 bp distal
SNP C/T T T T T T T T T T T T C T
rs240283062
MGI SNP Detail
Alliance Variant
Chr6:9151589 Nxph1 Intron
Rr626466 1515 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs33350773
MGI SNP Detail
Alliance Variant
Chr6:9151619 Nxph1 Intron
Rr626466 1545 bp distal
SNP C/T C C C C C C T C C C T C C C C
rs218737838
MGI SNP Detail
Alliance Variant
Chr6:9151642 Nxph1 Intron
Rr626466 1568 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33351675
MGI SNP Detail
Alliance Variant
Chr6:9151666 Nxph1 Intron
Rr626466 1592 bp distal
SNP C/T T T T T T T C T T T C T T T T
rs258233103
MGI SNP Detail
Alliance Variant
Chr6:9151707 Nxph1 Intron
Rr626466 1633 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30944631
MGI SNP Detail
Alliance Variant
Chr6:9151773 Nxph1 Intron
Rr626466 1699 bp distal
SNP A/C C C C A A C A C A C C C C C A
rs249340622
MGI SNP Detail
Alliance Variant
Chr6:9151777 Nxph1 Intron
Rr626466 1703 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T
rs263191975
MGI SNP Detail
Alliance Variant
Chr6:9151869 Nxph1 Intron
Rr626466 1795 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs235095216
MGI SNP Detail
Alliance Variant
Chr6:9151912 Nxph1 Intron
Rr626466 1838 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254270970
MGI SNP Detail
Alliance Variant
Chr6:9151920 Nxph1 Intron
Rr626466 1846 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254999847
MGI SNP Detail
Alliance Variant
Chr6:9151926 Nxph1 Intron
Rr626466 1852 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223883441
MGI SNP Detail
Alliance Variant
Chr6:9151972 Nxph1 Intron
Rr626466 1898 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs244772139
MGI SNP Detail
Alliance Variant
Chr6:9152061 Nxph1 Intron
Rr626466 1987 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 70 of 70

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory