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Mouse SNP Summary
Symbol
Name
ID 		Rr626650
regulatory region 626650
MGI:8088782

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Showing SNP(s) 1 - 46 of 46

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212294434
MGI SNP Detail
Alliance Variant		 Chr6:15184559 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626647 within coordinates of
Rr626650 1997 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs237083218
MGI SNP Detail
Alliance Variant		 Chr6:15184695 Foxp2 Intron
Foxp2 mRNA-UTR
Foxp2 Noncoding-Transcript-Variant
Rr626650 1861 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255172579
MGI SNP Detail
Alliance Variant		 Chr6:15184915 Foxp2 Intron
Foxp2 mRNA-UTR
Foxp2 Noncoding-Transcript-Variant
Rr626650 1641 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs216648004
MGI SNP Detail
Alliance Variant		 Chr6:15184922 Foxp2 Intron
Foxp2 mRNA-UTR
Foxp2 Noncoding-Transcript-Variant
Rr626650 1634 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232868709
MGI SNP Detail
Alliance Variant		 Chr6:15184940 Foxp2 Intron
Foxp2 mRNA-UTR
Foxp2 Noncoding-Transcript-Variant
Rr626650 1616 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs253071655
MGI SNP Detail
Alliance Variant		 Chr6:15184958 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 1598 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221893802
MGI SNP Detail
Alliance Variant		 Chr6:15184980 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 1576 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230490357
MGI SNP Detail
Alliance Variant		 Chr6:15184993 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 1563 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs36335228
MGI SNP Detail
Alliance Variant		 Chr6:15185139 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626648 within coordinates of
Rr626650 1417 bp proximal
 SNP C/T T T T C T C C T T T C C T T T C
rs222681396
MGI SNP Detail
Alliance Variant		 Chr6:15185250 Foxp2 Intron
Foxp2 mRNA-UTR
Foxp2 Noncoding-Transcript-Variant
Rr626648 within coordinates of
Rr626650 1306 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242741891
MGI SNP Detail
Alliance Variant		 Chr6:15185593 Foxp2 Intron
Foxp2 mRNA-UTR
Foxp2 Noncoding-Transcript-Variant
Rr626649 within coordinates of
Rr626650 963 bp proximal
Tssr54982 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265639597
MGI SNP Detail
Alliance Variant		 Chr6:15185685 Foxp2 Intron
Foxp2 mRNA-UTR
Foxp2 Noncoding-Transcript-Variant
Rr626649 within coordinates of
Rr626650 871 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs225316528
MGI SNP Detail
Alliance Variant		 Chr6:15185940 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626649 within coordinates of
Rr626650 616 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240914808
MGI SNP Detail
Alliance Variant		 Chr6:15186176 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626649 within coordinates of
Rr626650 380 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37154248
MGI SNP Detail
Alliance Variant		 Chr6:15186266 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626649 within coordinates of
Rr626650 290 bp proximal
 SNP C/T C C C T C T T C C C T T C C T C T
rs228777772
MGI SNP Detail
Alliance Variant		 Chr6:15186434 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 122 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36828669
MGI SNP Detail
Alliance Variant		 Chr6:15186618 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
 SNP C/T T T T C T C C T T T C C T T T C
rs261627707
MGI SNP Detail
Alliance Variant		 Chr6:15186870 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
Tssr54988 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231439082
MGI SNP Detail
Alliance Variant		 Chr6:15186996 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs38847463
MGI SNP Detail
Alliance Variant		 Chr6:15187035 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
 SNP C/T T T T T T T C T T C T T T
rs37045449
MGI SNP Detail
Alliance Variant		 Chr6:15187069 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
 SNP C/T T T T T T T C T T T C T T T
rs39182455
MGI SNP Detail
Alliance Variant		 Chr6:15187136 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
 SNP C/G G G G G G G C G G C G G G
rs247438956
MGI SNP Detail
Alliance Variant		 Chr6:15187203 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216515297
MGI SNP Detail
Alliance Variant		 Chr6:15187213 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230608653
MGI SNP Detail
Alliance Variant		 Chr6:15187244 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260823733
MGI SNP Detail
Alliance Variant		 Chr6:15187355 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223125839
MGI SNP Detail
Alliance Variant		 Chr6:15187360 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237816722
MGI SNP Detail
Alliance Variant		 Chr6:15187367 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259084051
MGI SNP Detail
Alliance Variant		 Chr6:15187397 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 28 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223798139
MGI SNP Detail
Alliance Variant		 Chr6:15187456 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 87 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36888332
MGI SNP Detail
Alliance Variant		 Chr6:15187556 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 187 bp distal
 SNP C/T C C C C C C C C C C C C T
rs261563413
MGI SNP Detail
Alliance Variant		 Chr6:15187585 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 216 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222920324
MGI SNP Detail
Alliance Variant		 Chr6:15188371 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1002 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238334836
MGI SNP Detail
Alliance Variant		 Chr6:15188435 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1066 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586078493
MGI SNP Detail
Alliance Variant		 Chr6:15188474 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1105 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264736370
MGI SNP Detail
Alliance Variant		 Chr6:15188528 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1159 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G A
rs231051783
MGI SNP Detail
Alliance Variant		 Chr6:15188542 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1173 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36853547
MGI SNP Detail
Alliance Variant		 Chr6:15188596 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1227 bp distal
 SNP C/T C C C T C T C C C C T C C C C C
rs263593276
MGI SNP Detail
Alliance Variant		 Chr6:15188635 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1266 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579570391
MGI SNP Detail
Alliance Variant		 Chr6:15189086 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1717 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581913260
MGI SNP Detail
Alliance Variant		 Chr6:15189098 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr406279 within coordinates of
Rr626650 1729 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226912906
MGI SNP Detail
Alliance Variant		 Chr6:15189138 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 1769 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247374834
MGI SNP Detail
Alliance Variant		 Chr6:15189183 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 1814 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36439269
MGI SNP Detail
Alliance Variant		 Chr6:15189184 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 1815 bp distal
 SNP A/G A A A G A G G A A A G G A A A G
rs38990191
MGI SNP Detail
Alliance Variant		 Chr6:15189228 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 1859 bp distal
 SNP A/T A A A A T A A T A A T
rs585573060
MGI SNP Detail
Alliance Variant		 Chr6:15189244 Foxp2 Intron
Foxp2 Noncoding-Transcript-Variant
Rr626650 1875 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 46 of 46
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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