Symbol Name ID |
Rr627312
regulatory region 627312 MGI:8089444 |
Loading... |
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs49356288 MGI SNP Detail Alliance Variant |
Chr6:25773486 | Pot1a Pot1a Rr627312 |
SNP | G/T | T | T | T | T | T | G | T | T | G | G | T | T | T | G | T | G | T | |||||||||||||||||||||||||||||||||||||
rs50626392 MGI SNP Detail Alliance Variant |
Chr6:25773596 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | |||||||||||||||||||||||||||||||||||||||
rs46069898 MGI SNP Detail Alliance Variant |
Chr6:25773640 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||||||||||||||||||||||||||||||||||||||
rs245470215 MGI SNP Detail Alliance Variant |
Chr6:25773642 | Pot1a Pot1a Rr627312 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | |
rs47610039 MGI SNP Detail Alliance Variant |
Chr6:25773841 | Pot1a Pot1a Rr627312 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | ||||||||||||||||||||||||||||||||||||||||
rs46424490 MGI SNP Detail Alliance Variant |
Chr6:25773895 | Pot1a Pot1a Rr627312 |
SNP | A/C | A | A | A | A | A | A | C | A | A | A | A | A | A | A | ||||||||||||||||||||||||||||||||||||||||
rs261617077 MGI SNP Detail Alliance Variant |
Chr6:25773959 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
rs212086414 MGI SNP Detail Alliance Variant |
Chr6:25774003 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs243534483 MGI SNP Detail Alliance Variant |
Chr6:25774046 | Pot1a Pot1a Rr627312 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | |
rs254807040 MGI SNP Detail Alliance Variant |
Chr6:25774056 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs583967533 MGI SNP Detail Alliance Variant |
Chr6:25774102 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs586156018 MGI SNP Detail Alliance Variant |
Chr6:25774138 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
rs222179242 MGI SNP Detail Alliance Variant |
Chr6:25774156 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C | C | T | |||
rs240791897 MGI SNP Detail Alliance Variant |
Chr6:25774161 | Pot1a Pot1a Rr627312 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | |
rs580881471 MGI SNP Detail Alliance Variant |
Chr6:25774192 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |
rs252276414 MGI SNP Detail Alliance Variant |
Chr6:25774196 | Pot1a Pot1a Rr627312 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | A | C | C | C | C | |
rs222893765 MGI SNP Detail Alliance Variant |
Chr6:25774197 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | |
rs242822712 MGI SNP Detail Alliance Variant |
Chr6:25774204 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | |
rs264783685 MGI SNP Detail Alliance Variant |
Chr6:25774209 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |
rs227250567 MGI SNP Detail Alliance Variant |
Chr6:25774238 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |
rs241569869 MGI SNP Detail Alliance Variant |
Chr6:25774252 | Pot1a Pot1a Rr627312 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |
rs47154881 MGI SNP Detail Alliance Variant |
Chr6:25774254 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | G | |||||||||||||||||||||||||||||||||||||||||
rs48348175 MGI SNP Detail Alliance Variant |
Chr6:25774306 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | G | |||||||||||||||||||||||||||||||||||||||||
rs51196793 MGI SNP Detail Alliance Variant |
Chr6:25774319 | Pot1a Pot1a Rr627312 |
SNP | G/T | T | T | T | T | T | T | G | T | T | T | T | T | T | G | ||||||||||||||||||||||||||||||||||||||||
rs214243680 MGI SNP Detail Alliance Variant |
Chr6:25774357 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs230451175 MGI SNP Detail Alliance Variant |
Chr6:25774371 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs51596585 MGI SNP Detail Alliance Variant |
Chr6:25774372 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | A | G | G | G | G | G | A | A | ||||||||||||||||||||||||||||||||||||||||
rs212378679 MGI SNP Detail Alliance Variant |
Chr6:25774406 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | ||
rs47658241 MGI SNP Detail Alliance Variant |
Chr6:25774407 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | C | T | T | C | ||||||||||||||||||||||||||||||||||||||||
rs254439531 MGI SNP Detail Alliance Variant |
Chr6:25774449 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs584567071 MGI SNP Detail Alliance Variant |
Chr6:25774479 | Pot1a Pot1a Rr627312 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | |
rs216296173 MGI SNP Detail Alliance Variant |
Chr6:25774503 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | |
rs234325820 MGI SNP Detail Alliance Variant |
Chr6:25774571 | Pot1a Pot1a Rr627312 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |
rs49185305 MGI SNP Detail Alliance Variant |
Chr6:25774579 | Pot1a Pot1a Rr627312 |
SNP | A/C | A | A | A | A | A | A | C | A | A | A | A | A | A | C | C | |||||||||||||||||||||||||||||||||||||||
rs222814126 MGI SNP Detail Alliance Variant |
Chr6:25774661 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs237817200 MGI SNP Detail Alliance Variant |
Chr6:25774681 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs256038720 MGI SNP Detail Alliance Variant |
Chr6:25774708 | Pot1a Pot1a Rr627312 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | ||
rs219761831 MGI SNP Detail Alliance Variant |
Chr6:25774740 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
rs241260001 MGI SNP Detail Alliance Variant |
Chr6:25774770 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs258569551 MGI SNP Detail Alliance Variant |
Chr6:25774787 | Pot1a Pot1a Rr627312 |
SNP | A/C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | A | C | C | C | C | |
rs221428298 MGI SNP Detail Alliance Variant |
Chr6:25774818 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |
rs239176288 MGI SNP Detail Alliance Variant |
Chr6:25774850 | Pot1a Pot1a Rr627312 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | T | A | A | A | A | |
rs265260170 MGI SNP Detail Alliance Variant |
Chr6:25774865 | Pot1a Pot1a Rr627312 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | ||
rs229716057 MGI SNP Detail Alliance Variant |
Chr6:25774934 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | ||
rs254450382 MGI SNP Detail Alliance Variant |
Chr6:25774974 | Pot1a Pot1a Rr627312 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
rs261626849 MGI SNP Detail Alliance Variant |
Chr6:25774994 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |
rs256893811 MGI SNP Detail Alliance Variant |
Chr6:25775019 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||
rs48923021 MGI SNP Detail Alliance Variant |
Chr6:25775226 | Pot1a Pot1a Rr627312 |
SNP | A/T | A | A | A | A | A | A | T | A | A | A | A | A | A | T | T | |||||||||||||||||||||||||||||||||||||||
rs215959357 MGI SNP Detail Alliance Variant |
Chr6:25775267 | Pot1a Pot1a Rr627312 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |
rs46758271 MGI SNP Detail Alliance Variant |
Chr6:25775324 | Pot1a Pot1a Rr627312 |
SNP | A/T | A | A | A | A | A | A | T | A | A | A | T | A | A | T | ||||||||||||||||||||||||||||||||||||||||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs48125354 MGI SNP Detail Alliance Variant |
Chr6:25775414 | Pot1a Pot1a Rr627312 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |||||||||||||||||||||||||||||||||||||||
rs46438059 MGI SNP Detail Alliance Variant |
Chr6:25775426 | Pot1a Pot1a Rr627312 |
SNP | A/C | A | A | A | A | A | A | C | A | A | A | A | A | A | C | C | |||||||||||||||||||||||||||||||||||||||
rs214568190 MGI SNP Detail Alliance Variant |
Chr6:25775468 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs48304363 MGI SNP Detail Alliance Variant |
Chr6:25775476 | Pot1a Pot1a Rr627312 |
SNP | A/T | A | A | A | A | A | A | A | A | A | T | A | A | T | |||||||||||||||||||||||||||||||||||||||||
rs261077558 MGI SNP Detail Alliance Variant |
Chr6:25775507 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | G | |
rs49930140 MGI SNP Detail Alliance Variant |
Chr6:25775508 | Pot1a Pot1a Rr627312 |
SNP | A/C | C | C | C | C | C | A | C | C | A | A | C | C | C | A | C | A | C | |||||||||||||||||||||||||||||||||||||
rs49365076 MGI SNP Detail Alliance Variant |
Chr6:25775517 | Pot1a Pot1a Pot1a Rr627312 |
SNP | C/G | G | G | G | G | G | G | C | G | G | G | C | G | G | C | ||||||||||||||||||||||||||||||||||||||||
rs47242717 MGI SNP Detail Alliance Variant |
Chr6:25775545 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | G | A | A | A | G | A | A | G | ||||||||||||||||||||||||||||||||||||||||
rs46214550 MGI SNP Detail Alliance Variant |
Chr6:25775603 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||||||||||||||||||||||||||||||||||||||
rs239241084 MGI SNP Detail Alliance Variant |
Chr6:25775632 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs262761033 MGI SNP Detail Alliance Variant |
Chr6:25775701 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
rs222022549 MGI SNP Detail Alliance Variant |
Chr6:25775764 | Pot1a Pot1a Rr627312 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |
rs242054418 MGI SNP Detail Alliance Variant |
Chr6:25775770 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs264587378 MGI SNP Detail Alliance Variant |
Chr6:25775806 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs229401508 MGI SNP Detail Alliance Variant |
Chr6:25775808 | Pot1a Pot1a Rr627312 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
rs51929821 MGI SNP Detail Alliance Variant |
Chr6:25775834 | Pot1a Pot1a Rr627312 |
SNP | A/C | A | A | A | A | A | A | C | A | A | A | C | A | A | C | C | |||||||||||||||||||||||||||||||||||||||
rs260029171 MGI SNP Detail Alliance Variant |
Chr6:25775877 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||||
rs584721309 MGI SNP Detail Alliance Variant |
Chr6:25775883 | Pot1a Pot1a Rr627312 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | ||
rs227396874 MGI SNP Detail Alliance Variant |
Chr6:25775928 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | |||
rs256770449 MGI SNP Detail Alliance Variant |
Chr6:25775940 | Pot1a Pot1a Rr627312 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | G | T | T | T | T | |
rs214267298 MGI SNP Detail Alliance Variant |
Chr6:25775942 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |
rs237513739 MGI SNP Detail Alliance Variant |
Chr6:25775964 | Pot1a Pot1a Rr627312 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |||
rs48914135 MGI SNP Detail Alliance Variant |
Chr6:25775968 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||||||||||||||||||||||||||||||||||||||
rs48650034 MGI SNP Detail Alliance Variant |
Chr6:25776124 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | C | C | C | T | ||||||||||||||||||||||||||||||||||||||||
rs47210598 MGI SNP Detail Alliance Variant |
Chr6:25776135 | Pot1a Pot1a Rr627312 |
SNP | C/G | C | C | C | C | C | C | G | C | C | C | C | C | C | G | ||||||||||||||||||||||||||||||||||||||||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs234985722 MGI SNP Detail Alliance Variant |
Chr6:25776256 | Pot1a Pot1a Rr627312 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | T | G | G | G | G | |
rs252442689 MGI SNP Detail Alliance Variant |
Chr6:25776279 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | ||
rs215657425 MGI SNP Detail Alliance Variant |
Chr6:25776280 | Pot1a Pot1a Rr627312 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | G | C | C | C | C | ||
rs232562158 MGI SNP Detail Alliance Variant |
Chr6:25776303 | Pot1a Pot1a Rr627312 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | ||
rs46800516 MGI SNP Detail Alliance Variant |
Chr6:25776325 | Pot1a Pot1a Rr627312 |
SNP | A/C | A | A | A | A | A | A | C | A | A | A | A | A | A | C | ||||||||||||||||||||||||||||||||||||||||
rs222565414 MGI SNP Detail Alliance Variant |
Chr6:25776362 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | ||||
rs50944146 MGI SNP Detail Alliance Variant |
Chr6:25776386 | Pot1a Pot1a Rr627312 |
SNP | A/G | A | A | A | A | A | A | G | A | A | A | A | A | A | G | ||||||||||||||||||||||||||||||||||||||||
rs255409271 MGI SNP Detail Alliance Variant |
Chr6:25776419 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||
rs51710465 MGI SNP Detail Alliance Variant |
Chr6:25776458 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | T | T | T | C | C | |||||||||||||||||||||||||||||||||||||||
rs49185212 MGI SNP Detail Alliance Variant |
Chr6:25776497 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | |||||||||||||||||||||||||||||||||||||||
rs48195178 MGI SNP Detail Alliance Variant |
Chr6:25776538 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | T | C | C | T | T | |||||||||||||||||||||||||||||||||||||||
rs227475338 MGI SNP Detail Alliance Variant |
Chr6:25776582 | Pot1a Pot1a Rr627312 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |
rs244227200 MGI SNP Detail Alliance Variant |
Chr6:25776586 | Pot1a Pot1a Rr627312 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |
rs52039307 MGI SNP Detail Alliance Variant |
Chr6:25776599 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | ||||||||||||||||||||||||||||||||||||||||
rs51206950 MGI SNP Detail Alliance Variant |
Chr6:25776601 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | ||||||||||||||||||||||||||||||||||||||||
rs253338919 MGI SNP Detail Alliance Variant |
Chr6:25776643 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs48642152 MGI SNP Detail Alliance Variant |
Chr6:25776666 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | |||||||||||||||||||||||||||||||||||||||
rs47792634 MGI SNP Detail Alliance Variant |
Chr6:25776676 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | ||||||||||||||||||||||||||||||||||||||||
rs246538812 MGI SNP Detail Alliance Variant |
Chr6:25776700 | Pot1a Pot1a Rr627312 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs215719518 MGI SNP Detail Alliance Variant |
Chr6:25776705 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs232622408 MGI SNP Detail Alliance Variant |
Chr6:25776742 | Pot1a Pot1a Rr627312 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs51711776 MGI SNP Detail Alliance Variant |
Chr6:25776755 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | |||||||||||||||||||||||||||||||||||||||
rs213791903 MGI SNP Detail Alliance Variant |
Chr6:25776761 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs235458640 MGI SNP Detail Alliance Variant |
Chr6:25776765 | Pot1a Pot1a Rr627312 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs260859816 MGI SNP Detail Alliance Variant |
Chr6:25776773 | Pot1a Pot1a Rr627312 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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