Symbol Name ID |
Rr627313
regulatory region 627313 MGI:8089445 |
Loading... |
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs228826732 MGI SNP Detail Alliance Variant |
Chr6:25806653 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | |||||
rs46274659 MGI SNP Detail Alliance Variant |
Chr6:25806684 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | C | C | C | T | C | |||||||||||||||||||||||||||||||||||||||||
rs47795807 MGI SNP Detail Alliance Variant |
Chr6:25806688 | Pot1a Pot1a Rr627313 |
SNP | A/G | A | A | A | A | A | A | A | A | A | G | A | A | A | |||||||||||||||||||||||||||||||||||||||||||
rs215789066 MGI SNP Detail Alliance Variant |
Chr6:25806697 | Pot1a Pot1a Rr627313 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | ||||||
rs239088262 MGI SNP Detail Alliance Variant |
Chr6:25806768 | Pot1a Pot1a Rr627313 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | ||||||||
rs257209470 MGI SNP Detail Alliance Variant |
Chr6:25806796 | Pot1a Pot1a Rr627313 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | G | C | C | C | C | |||||||||
rs213462624 MGI SNP Detail Alliance Variant |
Chr6:25806818 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | |||||||||
rs50039198 MGI SNP Detail Alliance Variant |
Chr6:25806825 | Pot1a Pot1a Rr627313 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | |||||||||||||||||||||||||||||||||||||||||
rs249473360 MGI SNP Detail Alliance Variant |
Chr6:25806869 | Pot1a Pot1a Rr627313 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | |||||||||
rs223385780 MGI SNP Detail Alliance Variant |
Chr6:25806903 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | |||||||||||
rs241951060 MGI SNP Detail Alliance Variant |
Chr6:25806938 | Pot1a Pot1a Rr627313 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||||||||
rs253599687 MGI SNP Detail Alliance Variant |
Chr6:25806950 | Pot1a Pot1a Rr627313 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | |||||||
rs223869486 MGI SNP Detail Alliance Variant |
Chr6:25806954 | Pot1a Pot1a Rr627313 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | ||||||||
rs246502126 MGI SNP Detail Alliance Variant |
Chr6:25806994 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | ||||||
rs262227807 MGI SNP Detail Alliance Variant |
Chr6:25807059 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | ||||||
rs45997175 MGI SNP Detail Alliance Variant |
Chr6:25807087 | Pot1a Pot1a Rr627313 |
SNP | G/T | T | T | T | T | T | G | T | T | G | G | T | T | T | G | T | G | T | |||||||||||||||||||||||||||||||||||||||
rs46531820 MGI SNP Detail Alliance Variant |
Chr6:25807114 | Pot1a Pot1a Rr627313 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |||||||||||||||||||||||||||||||||||||||||
rs48344961 MGI SNP Detail Alliance Variant |
Chr6:25807131 | Pot1a Pot1a Rr627313 |
SNP | A | A | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs235723078 MGI SNP Detail Alliance Variant |
Chr6:25807137 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
rs260125704 MGI SNP Detail Alliance Variant |
Chr6:25807144 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs228769814 MGI SNP Detail Alliance Variant |
Chr6:25807148 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs246285131 MGI SNP Detail Alliance Variant |
Chr6:25807158 | Pot1a Pot1a Rr627313 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | |||
rs216650507 MGI SNP Detail Alliance Variant |
Chr6:25807190 | Pot1a Pot1a Rr627313 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | |||
rs230921294 MGI SNP Detail Alliance Variant |
Chr6:25807204 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs255332219 MGI SNP Detail Alliance Variant |
Chr6:25807211 | Pot1a Pot1a Rr627313 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | |||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs212943499 MGI SNP Detail Alliance Variant |
Chr6:25807216 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |||
rs46141772 MGI SNP Detail Alliance Variant |
Chr6:25807289 | Pot1a Pot1a Rr627313 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | |||||||||||||||||||||||||||||||||||||||||
rs248996270 MGI SNP Detail Alliance Variant |
Chr6:25807295 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
rs217265714 MGI SNP Detail Alliance Variant |
Chr6:25807309 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs50115677 MGI SNP Detail Alliance Variant |
Chr6:25807355 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | |||||||||||||||||||||||||||||||||||||||||
rs50378491 MGI SNP Detail Alliance Variant |
Chr6:25807356 | Pot1a Pot1a Rr627313 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |||||||||||||||||||||||||||||||||||||||||
rs259396279 MGI SNP Detail Alliance Variant |
Chr6:25807371 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs224164001 MGI SNP Detail Alliance Variant |
Chr6:25807386 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs237013323 MGI SNP Detail Alliance Variant |
Chr6:25807398 | Pot1a Pot1a Rr627313 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |||
rs579527322 MGI SNP Detail Alliance Variant |
Chr6:25807416 | Pot1a Pot1a Rr627313 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |||
rs261822354 MGI SNP Detail Alliance Variant |
Chr6:25807470 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs221096576 MGI SNP Detail Alliance Variant |
Chr6:25807591 | Pot1a Pot1a Rr627313 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | C | A | A | A | A | C | A | A | A | A | A | C | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A | A | ||||
rs235659013 MGI SNP Detail Alliance Variant |
Chr6:25807624 | Pot1a Pot1a Rr627313 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |||
rs49462226 MGI SNP Detail Alliance Variant |
Chr6:25807670 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | |||||||||||||||||||||||||||||||||||||||||
rs222153417 MGI SNP Detail Alliance Variant |
Chr6:25807687 | Pot1a Pot1a Rr627313 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |||
rs240311515 MGI SNP Detail Alliance Variant |
Chr6:25807727 | Pot1a Pot1a Rr627313 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |||
rs263334457 MGI SNP Detail Alliance Variant |
Chr6:25807835 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |||
rs231600813 MGI SNP Detail Alliance Variant |
Chr6:25807851 | Pot1a Pot1a Rr627313 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | |||
rs251104632 MGI SNP Detail Alliance Variant |
Chr6:25807922 | Pot1a Pot1a Rr627313 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |||
rs216485859 MGI SNP Detail Alliance Variant |
Chr6:25807979 | Pot1a Pot1a Rr627313 |
SNP | A/C | A | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs229445421 MGI SNP Detail Alliance Variant |
Chr6:25807989 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs50845169 MGI SNP Detail Alliance Variant |
Chr6:25808089 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | C | C | T | C | C | T | T | T | C | T | C | C | |||||||||||||||||||||||||||||||||||||||
rs49092437 MGI SNP Detail Alliance Variant |
Chr6:25808139 | Pot1a Pot1a Rr627313 |
SNP | A/T | A | A | A | A | A | T | A | A | T | T | A | A | A | T | A | T | T | |||||||||||||||||||||||||||||||||||||||
rs258078072 MGI SNP Detail Alliance Variant |
Chr6:25808143 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
rs215603971 MGI SNP Detail Alliance Variant |
Chr6:25808181 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs238964723 MGI SNP Detail Alliance Variant |
Chr6:25808204 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||||
rs257076917 MGI SNP Detail Alliance Variant |
Chr6:25808224 | Pot1a Pot1a Rr627313 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||
rs49625635 MGI SNP Detail Alliance Variant |
Chr6:25808236 | Pot1a Pot1a Rr627313 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | |||||||||||||||||||||||||||||||||||||||||
rs229659249 MGI SNP Detail Alliance Variant |
Chr6:25808249 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||
rs252980929 MGI SNP Detail Alliance Variant |
Chr6:25808251 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
rs45887167 MGI SNP Detail Alliance Variant |
Chr6:25808288 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | |||||||||||||||||||||||||||||||||||||||||
rs49223151 MGI SNP Detail Alliance Variant |
Chr6:25808404 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | T | C | T | T | |||||||||||||||||||||||||||||||||||||||||||||
rs256753584 MGI SNP Detail Alliance Variant |
Chr6:25808410 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs223777343 MGI SNP Detail Alliance Variant |
Chr6:25808421 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||||
rs215804520 MGI SNP Detail Alliance Variant |
Chr6:25808430 | Pot1a Pot1a Rr627313 |
SNP | A/G | A | G | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs50399713 MGI SNP Detail Alliance Variant |
Chr6:25808453 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | T | T | C | C | C | C | T | T | |||||||||||||||||||||||||||||||||||||||||
rs252731674 MGI SNP Detail Alliance Variant |
Chr6:25808456 | Pot1a Pot1a Rr627313 |
SNP | A/T | T | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs242836130 MGI SNP Detail Alliance Variant |
Chr6:25808460 | Pot1a Pot1a Rr627313 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | ||||
rs260728882 MGI SNP Detail Alliance Variant |
Chr6:25808471 | Pot1a Pot1a Rr627313 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
rs228183552 MGI SNP Detail Alliance Variant |
Chr6:25808475 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs252482438 MGI SNP Detail Alliance Variant |
Chr6:25808497 | Pot1a Pot1a Rr627313 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||
rs47913275 MGI SNP Detail Alliance Variant |
Chr6:25808505 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | T | C | T | C | C | ||||||||||||||||||||||||||||||||||||||||||||||
rs230796672 MGI SNP Detail Alliance Variant |
Chr6:25808570 | Pot1a Pot1a Rr627313 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
rs50202324 MGI SNP Detail Alliance Variant |
Chr6:25808599 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | T | C | C | T | T | C | C | C | T | C | T | T | |||||||||||||||||||||||||||||||||||||||
rs47268147 MGI SNP Detail Alliance Variant |
Chr6:25808611 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | T | T | T | T | C | T | T | C | C | T | T | T | C | T | C | C | |||||||||||||||||||||||||||||||||||||||
rs230010248 MGI SNP Detail Alliance Variant |
Chr6:25808631 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
rs248060239 MGI SNP Detail Alliance Variant |
Chr6:25808678 | Pot1a Pot1a Rr627313 |
SNP | C/T | T | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs216398368 MGI SNP Detail Alliance Variant |
Chr6:25808741 | Pot1a Pot1a Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |||
rs220973620 MGI SNP Detail Alliance Variant |
Chr6:25808742 | Pot1a Pot1a Rr627313 |
SNP | A/G | A | G | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs243082401 MGI SNP Detail Alliance Variant |
Chr6:25808749 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs223408273 MGI SNP Detail Alliance Variant |
Chr6:25808768 | Pot1a Pot1a Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
rs243481571 MGI SNP Detail Alliance Variant |
Chr6:25808776 | Pot1a Pot1a Rr627313 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | |||
rs250777178 MGI SNP Detail Alliance Variant |
Chr6:25808781 | Pot1a Pot1a Rr627313 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |||
rs218479040 MGI SNP Detail Alliance Variant |
Chr6:25808857 | Pot1a Pot1a Rr379092 Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
rs243151137 MGI SNP Detail Alliance Variant |
Chr6:25808882 | Pot1a Pot1a Rr379092 Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
rs48921481 MGI SNP Detail Alliance Variant |
Chr6:25808888 | Pot1a Pot1a Rr379092 Rr627313 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | T | G | G | T | G | |||||||||||||||||||||||||||||||||||||||||
rs232475219 MGI SNP Detail Alliance Variant |
Chr6:25808892 | Pot1a Pot1a Rr379092 Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs262866107 MGI SNP Detail Alliance Variant |
Chr6:25808965 | Pot1a Pot1a Rr379092 Rr627313 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | C | C | A | A | A | A | C | C | A | C | C | C | C | A | A | C | C | C | C | A | A | A | C | C | A | A | C | A | C | A | C | A | C | A | C | A | C | C | A | C | C | C | ||||
rs230972225 MGI SNP Detail Alliance Variant |
Chr6:25808984 | Pot1a Pot1a Rr379092 Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||||
rs265288099 MGI SNP Detail Alliance Variant |
Chr6:25809000 | Pot1a Pot1a Rr379092 Rr627313 |
SNP | A/G | A | G | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
rs47124875 MGI SNP Detail Alliance Variant |
Chr6:25809023 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | |||||||||||||||||||||||||||||||||||||||||
rs223470510 MGI SNP Detail Alliance Variant |
Chr6:25809032 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs247440894 MGI SNP Detail Alliance Variant |
Chr6:25809046 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
rs48812307 MGI SNP Detail Alliance Variant |
Chr6:25809074 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 |
SNP | A/G | A | A | A | A | A | G | G | A | G | G | A | A | A | G | A | G | G | |||||||||||||||||||||||||||||||||||||||
rs238366538 MGI SNP Detail Alliance Variant |
Chr6:25809143 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
rs48065924 MGI SNP Detail Alliance Variant |
Chr6:25809150 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 |
SNP | C/T | C | C | C | C | C | T | T | C | T | T | C | C | C | T | C | T | T | |||||||||||||||||||||||||||||||||||||||
rs214502415 MGI SNP Detail Alliance Variant |
Chr6:25809207 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 Rr627314 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
rs49081609 MGI SNP Detail Alliance Variant |
Chr6:25809209 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 Rr627314 Tssr60012 |
SNP | A/G | G | G | G | G | G | A | A | G | A | A | G | G | A | G | A | |||||||||||||||||||||||||||||||||||||||||
rs47169131 MGI SNP Detail Alliance Variant |
Chr6:25809220 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 Rr627314 Tssr60012 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||||||||||||||||||||||||||||||||||||||||
rs46852802 MGI SNP Detail Alliance Variant |
Chr6:25809253 | Cpgi17207 Pot1a Pot1a Rr379092 Rr627313 Rr627314 Tssr60013 |
SNP | C/T | T | T | T | T | T | C | C | T | C | C | T | C | T | C | C | C | C | |||||||||||||||||||||||||||||||||||||||
rs46335761 MGI SNP Detail |
Chr6:25809283 | Cpgi17207 Rr379092 Rr627313 Rr627314 |
SNP | C/G | G | G | G | G | G | C | C | G | C | C | G | C | C | G | C | C | C | C | ||||||||||||||||||||||||||||||||||||||
rs218425077 MGI SNP Detail |
Chr6:25809295 | Cpgi17207 Rr379092 Rr627313 Rr627314 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | |||
rs48642173 MGI SNP Detail |
Chr6:25809305 | Cpgi17207 Rr379092 Rr627313 Rr627314 |
SNP | G/T | G | G | G | G | G | T | G | T | T | G | T | T | ||||||||||||||||||||||||||||||||||||||||||||
rs254840742 MGI SNP Detail |
Chr6:25809339 | Cpgi17207 Rr379092 Rr627313 Rr627314 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
rs225249164 MGI SNP Detail |
Chr6:25809340 | Cpgi17207 Rr379092 Rr627313 Rr627314 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 07/22/2025 MGI 6.24 |
![]() |
|
|