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Mouse SNP Summary
Symbol
Name
ID
Rr627447
regulatory region 627447
MGI:8089579

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Showing SNP(s) 1 - 84 of 84

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33837391
MGI SNP Detail
Alliance Variant
Chr6:28862564 Rr627447 1956 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T C C
rs261834478
MGI SNP Detail
Alliance Variant
Chr6:28862674 Rr627447 1846 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221391383
MGI SNP Detail
Alliance Variant
Chr6:28862694 Rr627447 1826 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243967334
MGI SNP Detail
Alliance Variant
Chr6:28862908 Rr627447 1612 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33837393
MGI SNP Detail
Alliance Variant
Chr6:28862934 Rr627447 1586 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T C T
rs228217937
MGI SNP Detail
Alliance Variant
Chr6:28863369 Rr627447 1151 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs239923153
MGI SNP Detail
Alliance Variant
Chr6:28863387 Rr627447 1133 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258258061
MGI SNP Detail
Alliance Variant
Chr6:28863390 Rr627447 1130 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33838365
MGI SNP Detail
Alliance Variant
Chr6:28863418 Rr627447 1102 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP G/T T T T T T T G T T T G T T T T
rs227002814
MGI SNP Detail
Alliance Variant
Chr6:28863433 Rr627447 1087 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251545016
MGI SNP Detail
Alliance Variant
Chr6:28863438 Rr627447 1082 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45850269
MGI SNP Detail
Alliance Variant
Chr6:28863477 Rr627447 1043 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G A
rs228919616
MGI SNP Detail
Alliance Variant
Chr6:28863495 Rr627447 1025 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253345558
MGI SNP Detail
Alliance Variant
Chr6:28863613 Rr627447 907 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217802661
MGI SNP Detail
Alliance Variant
Chr6:28863660 Rr627447 860 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs235785012
MGI SNP Detail
Alliance Variant
Chr6:28863788 Rr627447 732 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253874500
MGI SNP Detail
Alliance Variant
Chr6:28863808 Rr627447 712 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214922463
MGI SNP Detail
Alliance Variant
Chr6:28863846 Rr627447 674 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238825228
MGI SNP Detail
Alliance Variant
Chr6:28863847 Rr627447 673 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs256903826
MGI SNP Detail
Alliance Variant
Chr6:28863910 Rr627447 610 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33838367
MGI SNP Detail
Alliance Variant
Chr6:28863929 Rr627447 591 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G A G G A G
rs240835070
MGI SNP Detail
Alliance Variant
Chr6:28863960 Rr627447 560 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33838369
MGI SNP Detail
Alliance Variant
Chr6:28864010 Rr627447 510 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T C T T C T
rs108919498
MGI SNP Detail
Alliance Variant
Chr6:28864193 Rr627447 327 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/C A A A C
rs239861291
MGI SNP Detail
Alliance Variant
Chr6:28864211 Rr627447 309 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33838371
MGI SNP Detail
Alliance Variant
Chr6:28864228 Rr627447 292 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T C T T C C
rs33838373
MGI SNP Detail
Alliance Variant
Chr6:28864291 Rr627447 229 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T C
rs584557703
MGI SNP Detail
Alliance Variant
Chr6:28864333 Rr627447 187 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33839225
MGI SNP Detail
Alliance Variant
Chr6:28864376 Rr627447 144 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T A T
rs33839227
MGI SNP Detail
Alliance Variant
Chr6:28864415 Rr627447 105 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C T C C C C
rs33839229
MGI SNP Detail
Alliance Variant
Chr6:28864477 Rr627447 43 bp proximal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C T C C T C
rs33839231
MGI SNP Detail
Alliance Variant
Chr6:28864549 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/C C C C C C C A C C C A C C A C
rs217746299
MGI SNP Detail
Alliance Variant
Chr6:28864976 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs33839233
MGI SNP Detail
Alliance Variant
Chr6:28865071 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP G/T T T T T T T G T T T G T T G T
rs33839925
MGI SNP Detail
Alliance Variant
Chr6:28865219 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A G A A G G
rs33839927
MGI SNP Detail
Alliance Variant
Chr6:28865226 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C T C C C C
rs33839929
MGI SNP Detail
Alliance Variant
Chr6:28865249 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G A G G A A
rs254936709
MGI SNP Detail
Alliance Variant
Chr6:28865278 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs212624069
MGI SNP Detail
Alliance Variant
Chr6:28865508 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235820536
MGI SNP Detail
Alliance Variant
Chr6:28865517 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252955033
MGI SNP Detail
Alliance Variant
Chr6:28865531 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221907163
MGI SNP Detail
Alliance Variant
Chr6:28865613 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs233550675
MGI SNP Detail
Alliance Variant
Chr6:28865622 Rr627447 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251242544
MGI SNP Detail
Alliance Variant
Chr6:28865628 Rr627447 5 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222979136
MGI SNP Detail
Alliance Variant
Chr6:28865665 Rr627447 42 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs243024581
MGI SNP Detail
Alliance Variant
Chr6:28865682 Rr627447 59 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs265110079
MGI SNP Detail
Alliance Variant
Chr6:28865817 Rr627447 194 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33839931
MGI SNP Detail
Alliance Variant
Chr6:28865889 Rr627447 266 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G A G G G G
rs237229784
MGI SNP Detail
Alliance Variant
Chr6:28865968 Rr627447 345 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs261329305
MGI SNP Detail
Alliance Variant
Chr6:28865976 Rr627447 353 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579086152
MGI SNP Detail
Alliance Variant
Chr6:28866076 Rr627447 453 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580851827
MGI SNP Detail
Alliance Variant
Chr6:28866100 Rr627447 477 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs584686350
MGI SNP Detail
Alliance Variant
Chr6:28866121 Rr627447 498 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33839933
MGI SNP Detail
Alliance Variant
Chr6:28866199 Rr627447 576 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C A C
rs247604573
MGI SNP Detail
Alliance Variant
Chr6:28866267 Rr627447 644 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263372291
MGI SNP Detail
Alliance Variant
Chr6:28866275 Rr627447 652 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231466840
MGI SNP Detail
Alliance Variant
Chr6:28866324 Rr627447 701 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250997024
MGI SNP Detail
Alliance Variant
Chr6:28866377 Rr627447 754 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs212936941
MGI SNP Detail
Alliance Variant
Chr6:28866414 Rr627447 791 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234451705
MGI SNP Detail
Alliance Variant
Chr6:28866417 Rr627447 794 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs247268958
MGI SNP Detail
Alliance Variant
Chr6:28866421 Rr627447 798 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216359813
MGI SNP Detail
Alliance Variant
Chr6:28866486 Rr627447 863 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233312237
MGI SNP Detail
Alliance Variant
Chr6:28866497 Rr627447 874 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251181879
MGI SNP Detail
Alliance Variant
Chr6:28866522 Rr627447 899 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223404611
MGI SNP Detail
Alliance Variant
Chr6:28866607 Rr627447 984 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33840625
MGI SNP Detail
Alliance Variant
Chr6:28866661 Rr627447 1038 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T C
rs33840627
MGI SNP Detail
Alliance Variant
Chr6:28866685 Rr627447 1062 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T C T
rs33840629
MGI SNP Detail
Alliance Variant
Chr6:28866709 Rr627447 1086 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T C T
rs237384032
MGI SNP Detail
Alliance Variant
Chr6:28866740 Rr627447 1117 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261436524
MGI SNP Detail
Alliance Variant
Chr6:28866834 Rr627447 1211 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33840631
MGI SNP Detail
Alliance Variant
Chr6:28866845 Rr627447 1222 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP G/T T T T T T T G T T T G T T T
rs241357239
MGI SNP Detail
Alliance Variant
Chr6:28866910 Rr627447 1287 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A G G A G A A G A A A A G A A A A G G A A G A A A G A A A A A A A G A A A A
rs33840633
MGI SNP Detail
Alliance Variant
Chr6:28866924 Rr627447 1301 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T A
rs33841295
MGI SNP Detail
Alliance Variant
Chr6:28866949 Rr627447 1326 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G A G G G G
rs33841297
MGI SNP Detail
Alliance Variant
Chr6:28866981 Rr627447 1358 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C T T T C C T C T C T T T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255555093
MGI SNP Detail
Alliance Variant
Chr6:28867016 Rr627447 1393 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262085582
MGI SNP Detail
Alliance Variant
Chr6:28867087 Rr627447 1464 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33841299
MGI SNP Detail
Alliance Variant
Chr6:28867106 Rr627447 1483 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G A G G A G
rs33841301
MGI SNP Detail
Alliance Variant
Chr6:28867172 Rr627447 1549 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A A G A A G A
rs216486363
MGI SNP Detail
Alliance Variant
Chr6:28867191 Rr627447 1568 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33841303
MGI SNP Detail
Alliance Variant
Chr6:28867377 Rr627447 1754 bp distal
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A A G A A A A
rs33841945
MGI SNP Detail
Alliance Variant
Chr6:28867432 Rr627447 1809 bp distal
Rr627448 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C T C C C C
rs578283791
MGI SNP Detail
Alliance Variant
Chr6:28867492 Rr627447 1869 bp distal
Rr627448 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs581971648
MGI SNP Detail
Alliance Variant
Chr6:28867508 Rr627447 1885 bp distal
Rr627448 within coordinates of
Snd1 Intron
Snd1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 84 of 84

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory