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Mouse SNP Summary
Symbol
Name
ID
Rr627478
regulatory region 627478
MGI:8089610

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Showing SNP(s) 1 - 100 of 148

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265349649
MGI SNP Detail
Alliance Variant
Chr6:29021104 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 1992 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29603779
MGI SNP Detail
Alliance Variant
Chr6:29021159 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 1937 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs578472458
MGI SNP Detail
Alliance Variant
Chr6:29021164 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 1932 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230372947
MGI SNP Detail
Alliance Variant
Chr6:29021252 Gm3294 Coding-Synonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1844 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253685763
MGI SNP Detail
Alliance Variant
Chr6:29021278 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1818 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29603781
MGI SNP Detail
Alliance Variant
Chr6:29021332 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1764 bp proximal
SNP G/T T T T T T T G T T G G T G T
rs229051918
MGI SNP Detail
Alliance Variant
Chr6:29021356 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1740 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T G G T T T G G G T T T T G T T T T G T G T T T T T G T G T T T T
rs247695728
MGI SNP Detail
Alliance Variant
Chr6:29021367 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1729 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G A A A G G G G A G G G G A G G G G G G G A G A G G G G
rs215639792
MGI SNP Detail
Alliance Variant
Chr6:29021369 Gm3294 Coding-Synonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1727 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T C C C T T T T C T T T T C T T T T T T T C T C T T T T
rs233824883
MGI SNP Detail
Alliance Variant
Chr6:29021389 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1707 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G A A A G G G G A G G G G A G G G G G G G A G A G G G G
rs251513185
MGI SNP Detail
Alliance Variant
Chr6:29021392 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1704 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A G G G A A A A G A A A A G A A A A A A A G A G A A A A
rs214006433
MGI SNP Detail
Alliance Variant
Chr6:29021394 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1702 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G T T G G G T T T G G G G T G G G G T G G G G G G G T G G G G G G
rs29603783
MGI SNP Detail
Alliance Variant
Chr6:29021508 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627477 within coordinates of
Rr627478 1588 bp proximal
SNP C/T T T T T T T T T C T C T
rs260809861
MGI SNP Detail
Alliance Variant
Chr6:29021509 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627477 within coordinates of
Rr627478 1587 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G
rs218108057
MGI SNP Detail
Alliance Variant
Chr6:29021584 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1512 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29604715
MGI SNP Detail
Alliance Variant
Chr6:29021605 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1491 bp proximal
SNP A/G G G G G G G A G G A G G A G G
rs252654713
MGI SNP Detail
Alliance Variant
Chr6:29021613 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1483 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221489560
MGI SNP Detail
Alliance Variant
Chr6:29021625 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1471 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29604717
MGI SNP Detail
Alliance Variant
Chr6:29021635 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1461 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs581514082
MGI SNP Detail
Alliance Variant
Chr6:29021705 Gm3294 Coding-Synonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1391 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262971259
MGI SNP Detail
Alliance Variant
Chr6:29021766 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1330 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs222667117
MGI SNP Detail
Alliance Variant
Chr6:29021855 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1241 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs242478004
MGI SNP Detail
Alliance Variant
Chr6:29021890 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 1206 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29595134
MGI SNP Detail
Alliance Variant
Chr6:29021973 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Gm3294 Splice-Site
Rr627478 1123 bp proximal
SNP C/T T T T T T T T T T C T T C T
rs229017852
MGI SNP Detail
Alliance Variant
Chr6:29021978 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Gm3294 Splice-Site
Rr627478 1118 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247796298
MGI SNP Detail
Alliance Variant
Chr6:29022146 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 950 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259563582
MGI SNP Detail
Alliance Variant
Chr6:29022254 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 842 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227056481
MGI SNP Detail
Alliance Variant
Chr6:29022272 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 824 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255919454
MGI SNP Detail
Alliance Variant
Chr6:29022325 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 771 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213705279
MGI SNP Detail
Alliance Variant
Chr6:29022385 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 711 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237304125
MGI SNP Detail
Alliance Variant
Chr6:29022406 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 690 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29595136
MGI SNP Detail
Alliance Variant
Chr6:29022430 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 666 bp proximal
SNP C/G G G G G G G C G G G C G G C G
rs217239133
MGI SNP Detail
Alliance Variant
Chr6:29022528 Gm3294 Coding-NonSynonymous
Gm3294 Noncoding-Transcript-Variant
Rr627478 568 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235309509
MGI SNP Detail
Alliance Variant
Chr6:29022742 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 354 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252765891
MGI SNP Detail
Alliance Variant
Chr6:29022748 Gm3294 Coding-Synonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 348 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs29595138
MGI SNP Detail
Alliance Variant
Chr6:29022799 Gm3294 Coding-Synonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 297 bp proximal
SNP G/T G G G G G G G G G G T G G T G
rs221464227
MGI SNP Detail
Alliance Variant
Chr6:29022908 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 188 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs237944210
MGI SNP Detail
Alliance Variant
Chr6:29022991 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 105 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A G G G A A A A G A A A A G A G A A A A A G A G A A A A
rs262507851
MGI SNP Detail
Alliance Variant
Chr6:29022995 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 101 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222924850
MGI SNP Detail
Alliance Variant
Chr6:29023027 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 69 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29595140
MGI SNP Detail
Alliance Variant
Chr6:29023037 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 59 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs245515608
MGI SNP Detail
Alliance Variant
Chr6:29023054 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 42 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249851939
MGI SNP Detail
Alliance Variant
Chr6:29023088 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 8 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29595142
MGI SNP Detail
Alliance Variant
Chr6:29023099 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T C C C C C C C C C C T C T C
rs223725121
MGI SNP Detail
Alliance Variant
Chr6:29023102 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29596244
MGI SNP Detail
Alliance Variant
Chr6:29023103 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G A G G A G G
rs241765174
MGI SNP Detail
Alliance Variant
Chr6:29023143 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259667991
MGI SNP Detail
Alliance Variant
Chr6:29023182 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29596246
MGI SNP Detail
Alliance Variant
Chr6:29023282 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs243726726
MGI SNP Detail
Alliance Variant
Chr6:29023315 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264995567
MGI SNP Detail
Alliance Variant
Chr6:29023329 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228672007
MGI SNP Detail
Alliance Variant
Chr6:29023467 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627479 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242289647
MGI SNP Detail
Alliance Variant
Chr6:29023471 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217213823
MGI SNP Detail
Alliance Variant
Chr6:29023519 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228271315
MGI SNP Detail
Alliance Variant
Chr6:29023568 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29596248
MGI SNP Detail
Alliance Variant
Chr6:29023585 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G A G G A G G
rs245899183
MGI SNP Detail
Alliance Variant
Chr6:29023715 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216072307
MGI SNP Detail
Alliance Variant
Chr6:29023718 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585275882
MGI SNP Detail
Alliance Variant
Chr6:29023791 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240249653
MGI SNP Detail
Alliance Variant
Chr6:29023797 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257928674
MGI SNP Detail
Alliance Variant
Chr6:29023798 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214304286
MGI SNP Detail
Alliance Variant
Chr6:29023872 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235730446
MGI SNP Detail
Alliance Variant
Chr6:29023892 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29596250
MGI SNP Detail
Alliance Variant
Chr6:29024053 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G A A A A A A G A A A A A A
rs29596252
MGI SNP Detail
Alliance Variant
Chr6:29024059 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G A G A G
rs223852710
MGI SNP Detail
Alliance Variant
Chr6:29024076 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242243303
MGI SNP Detail
Alliance Variant
Chr6:29024144 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs253900243
MGI SNP Detail
Alliance Variant
Chr6:29024257 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29597224
MGI SNP Detail
Alliance Variant
Chr6:29024289 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/T A A A A A A T A A A A A A
rs246616447
MGI SNP Detail
Alliance Variant
Chr6:29024309 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs262180274
MGI SNP Detail
Alliance Variant
Chr6:29024325 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29597226
MGI SNP Detail
Alliance Variant
Chr6:29024332 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G A A A A A A G A A A G A G A
rs235799630
MGI SNP Detail
Alliance Variant
Chr6:29024335 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259827883
MGI SNP Detail
Alliance Variant
Chr6:29024408 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228425447
MGI SNP Detail
Alliance Variant
Chr6:29024424 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245865327
MGI SNP Detail
Alliance Variant
Chr6:29024444 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216071178
MGI SNP Detail
Alliance Variant
Chr6:29024498 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231777549
MGI SNP Detail
Alliance Variant
Chr6:29024500 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256506584
MGI SNP Detail
Alliance Variant
Chr6:29024514 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29597228
MGI SNP Detail
Alliance Variant
Chr6:29024566 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T C C C C C C C C C C T C T C
rs213814650
MGI SNP Detail
Alliance Variant
Chr6:29024621 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237330363
MGI SNP Detail
Alliance Variant
Chr6:29024650 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249713533
MGI SNP Detail
Alliance Variant
Chr6:29024652 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217776092
MGI SNP Detail
Alliance Variant
Chr6:29024655 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235985637
MGI SNP Detail
Alliance Variant
Chr6:29024679 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 23 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253821873
MGI SNP Detail
Alliance Variant
Chr6:29024689 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 33 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs224539901
MGI SNP Detail
Alliance Variant
Chr6:29024749 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 93 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236736715
MGI SNP Detail
Alliance Variant
Chr6:29024800 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 144 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261896364
MGI SNP Detail
Alliance Variant
Chr6:29024835 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 179 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221245519
MGI SNP Detail
Alliance Variant
Chr6:29024853 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 197 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235574927
MGI SNP Detail
Alliance Variant
Chr6:29024877 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 221 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259582531
MGI SNP Detail
Alliance Variant
Chr6:29024884 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 228 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221931015
MGI SNP Detail
Alliance Variant
Chr6:29024928 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 272 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240014045
MGI SNP Detail
Alliance Variant
Chr6:29025066 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627478 410 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263093070
MGI SNP Detail
Alliance Variant
Chr6:29025090 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627478 434 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs231051103
MGI SNP Detail
Alliance Variant
Chr6:29025102 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627478 446 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250615392
MGI SNP Detail
Alliance Variant
Chr6:29025124 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627478 468 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265111943
MGI SNP Detail
Alliance Variant
Chr6:29025126 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627478 470 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs225181435
MGI SNP Detail
Alliance Variant
Chr6:29025171 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627478 515 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582059546
MGI SNP Detail
Alliance Variant
Chr6:29025178 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627478 522 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
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Showing SNP(s) 1 - 100 of 148

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory