About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr627480
regulatory region 627480
MGI:8089612

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 103

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259563582
MGI SNP Detail
Alliance Variant
Chr6:29022254 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1895 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227056481
MGI SNP Detail
Alliance Variant
Chr6:29022272 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1877 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255919454
MGI SNP Detail
Alliance Variant
Chr6:29022325 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1824 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213705279
MGI SNP Detail
Alliance Variant
Chr6:29022385 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1764 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237304125
MGI SNP Detail
Alliance Variant
Chr6:29022406 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1743 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29595136
MGI SNP Detail
Alliance Variant
Chr6:29022430 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1719 bp proximal
SNP C/G G G G G G G C G G G C G G C G
rs217239133
MGI SNP Detail
Alliance Variant
Chr6:29022528 Gm3294 Coding-NonSynonymous
Gm3294 Noncoding-Transcript-Variant
Rr627480 1621 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235309509
MGI SNP Detail
Alliance Variant
Chr6:29022742 Gm3294 Coding-NonSynonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1407 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252765891
MGI SNP Detail
Alliance Variant
Chr6:29022748 Gm3294 Coding-Synonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1401 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs29595138
MGI SNP Detail
Alliance Variant
Chr6:29022799 Gm3294 Coding-Synonymous
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 1350 bp proximal
SNP G/T G G G G G G G G G G T G G T G
rs221464227
MGI SNP Detail
Alliance Variant
Chr6:29022908 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627480 1241 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs237944210
MGI SNP Detail
Alliance Variant
Chr6:29022991 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627480 1158 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A G G G A A A A G A A A A G A G A A A A A G A G A A A A
rs262507851
MGI SNP Detail
Alliance Variant
Chr6:29022995 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627480 1154 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222924850
MGI SNP Detail
Alliance Variant
Chr6:29023027 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627480 1122 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29595140
MGI SNP Detail
Alliance Variant
Chr6:29023037 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627480 1112 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs245515608
MGI SNP Detail
Alliance Variant
Chr6:29023054 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627480 1095 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249851939
MGI SNP Detail
Alliance Variant
Chr6:29023088 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627480 1061 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29595142
MGI SNP Detail
Alliance Variant
Chr6:29023099 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 1050 bp proximal
SNP C/T C C C C C C C C C C T C T C
rs223725121
MGI SNP Detail
Alliance Variant
Chr6:29023102 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 1047 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29596244
MGI SNP Detail
Alliance Variant
Chr6:29023103 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 1046 bp proximal
SNP A/G G G G G G G G G G A G G A G G
rs241765174
MGI SNP Detail
Alliance Variant
Chr6:29023143 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 1006 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259667991
MGI SNP Detail
Alliance Variant
Chr6:29023182 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 967 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29596246
MGI SNP Detail
Alliance Variant
Chr6:29023282 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 867 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs243726726
MGI SNP Detail
Alliance Variant
Chr6:29023315 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 834 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264995567
MGI SNP Detail
Alliance Variant
Chr6:29023329 Gm3294 Intron
Gm3294 mRNA-UTR
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 820 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228672007
MGI SNP Detail
Alliance Variant
Chr6:29023467 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627479 within coordinates of
Rr627480 682 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242289647
MGI SNP Detail
Alliance Variant
Chr6:29023471 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 678 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217213823
MGI SNP Detail
Alliance Variant
Chr6:29023519 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 630 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228271315
MGI SNP Detail
Alliance Variant
Chr6:29023568 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 581 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29596248
MGI SNP Detail
Alliance Variant
Chr6:29023585 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 564 bp proximal
SNP A/G G G G G G G G G A G G A G G
rs245899183
MGI SNP Detail
Alliance Variant
Chr6:29023715 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 434 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216072307
MGI SNP Detail
Alliance Variant
Chr6:29023718 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 431 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585275882
MGI SNP Detail
Alliance Variant
Chr6:29023791 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 358 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240249653
MGI SNP Detail
Alliance Variant
Chr6:29023797 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 352 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257928674
MGI SNP Detail
Alliance Variant
Chr6:29023798 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 351 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214304286
MGI SNP Detail
Alliance Variant
Chr6:29023872 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 277 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235730446
MGI SNP Detail
Alliance Variant
Chr6:29023892 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 257 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29596250
MGI SNP Detail
Alliance Variant
Chr6:29024053 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 96 bp proximal
SNP A/G A A A A A A G A A A A A A
rs29596252
MGI SNP Detail
Alliance Variant
Chr6:29024059 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 90 bp proximal
SNP A/G G G G G G G G G G G A G A G
rs223852710
MGI SNP Detail
Alliance Variant
Chr6:29024076 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 73 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242243303
MGI SNP Detail
Alliance Variant
Chr6:29024144 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 5 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs253900243
MGI SNP Detail
Alliance Variant
Chr6:29024257 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 87 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29597224
MGI SNP Detail
Alliance Variant
Chr6:29024289 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 119 bp distal
SNP A/T A A A A A A T A A A A A A
rs246616447
MGI SNP Detail
Alliance Variant
Chr6:29024309 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 139 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs262180274
MGI SNP Detail
Alliance Variant
Chr6:29024325 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 155 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29597226
MGI SNP Detail
Alliance Variant
Chr6:29024332 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 162 bp distal
SNP A/G A A A A A A G A A A G A G A
rs235799630
MGI SNP Detail
Alliance Variant
Chr6:29024335 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 165 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259827883
MGI SNP Detail
Alliance Variant
Chr6:29024408 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 238 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228425447
MGI SNP Detail
Alliance Variant
Chr6:29024424 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 254 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245865327
MGI SNP Detail
Alliance Variant
Chr6:29024444 Cpgi17221 within coordinates of
Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 274 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216071178
MGI SNP Detail
Alliance Variant
Chr6:29024498 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 328 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231777549
MGI SNP Detail
Alliance Variant
Chr6:29024500 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 330 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256506584
MGI SNP Detail
Alliance Variant
Chr6:29024514 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 344 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29597228
MGI SNP Detail
Alliance Variant
Chr6:29024566 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 396 bp distal
SNP C/T C C C C C C C C C C T C T C
rs213814650
MGI SNP Detail
Alliance Variant
Chr6:29024621 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 451 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237330363
MGI SNP Detail
Alliance Variant
Chr6:29024650 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 480 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249713533
MGI SNP Detail
Alliance Variant
Chr6:29024652 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 482 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217776092
MGI SNP Detail
Alliance Variant
Chr6:29024655 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627478 within coordinates of
Rr627480 485 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235985637
MGI SNP Detail
Alliance Variant
Chr6:29024679 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 509 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253821873
MGI SNP Detail
Alliance Variant
Chr6:29024689 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 519 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs224539901
MGI SNP Detail
Alliance Variant
Chr6:29024749 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 579 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236736715
MGI SNP Detail
Alliance Variant
Chr6:29024800 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 630 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261896364
MGI SNP Detail
Alliance Variant
Chr6:29024835 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 665 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221245519
MGI SNP Detail
Alliance Variant
Chr6:29024853 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 683 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235574927
MGI SNP Detail
Alliance Variant
Chr6:29024877 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 707 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259582531
MGI SNP Detail
Alliance Variant
Chr6:29024884 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 714 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221931015
MGI SNP Detail
Alliance Variant
Chr6:29024928 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr627480 758 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240014045
MGI SNP Detail
Alliance Variant
Chr6:29025066 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 896 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263093070
MGI SNP Detail
Alliance Variant
Chr6:29025090 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 920 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs231051103
MGI SNP Detail
Alliance Variant
Chr6:29025102 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 932 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250615392
MGI SNP Detail
Alliance Variant
Chr6:29025124 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 954 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265111943
MGI SNP Detail
Alliance Variant
Chr6:29025126 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 956 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs225181435
MGI SNP Detail
Alliance Variant
Chr6:29025171 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1001 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582059546
MGI SNP Detail
Alliance Variant
Chr6:29025178 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1008 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs582332121
MGI SNP Detail
Alliance Variant
Chr6:29025181 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1011 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586112565
MGI SNP Detail
Alliance Variant
Chr6:29025203 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1033 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29597230
MGI SNP Detail
Alliance Variant
Chr6:29025256 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1086 bp distal
SNP C/T T T T T T T T T T C T C T
rs217496424
MGI SNP Detail
Alliance Variant
Chr6:29025362 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1192 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29597232
MGI SNP Detail
Alliance Variant
Chr6:29025391 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1221 bp distal
SNP A/G A A A A A A A A A A G A G A
rs258755080
MGI SNP Detail
Alliance Variant
Chr6:29025408 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1238 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216001578
MGI SNP Detail
Alliance Variant
Chr6:29025409 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1239 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29598154
MGI SNP Detail
Alliance Variant
Chr6:29025496 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1326 bp distal
SNP C/T C C C C C C T C C T C T C
rs29598156
MGI SNP Detail
Alliance Variant
Chr6:29025543 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1373 bp distal
SNP C/T C C C C C C C C C C T C T C
rs257377955
MGI SNP Detail
Alliance Variant
Chr6:29025574 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1404 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29598158
MGI SNP Detail
Alliance Variant
Chr6:29025592 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1422 bp distal
SNP C/T C C C C C C C C C T C T C
rs220795157
MGI SNP Detail
Alliance Variant
Chr6:29025701 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1531 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29598160
MGI SNP Detail
Alliance Variant
Chr6:29025734 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1564 bp distal
SNP C/T T T T T T T T T T C T C T
rs229794549
MGI SNP Detail
Alliance Variant
Chr6:29025745 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1575 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29598162
MGI SNP Detail
Alliance Variant
Chr6:29025790 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1620 bp distal
SNP A/G A A A A A A G A A A G A G A
rs29598964
MGI SNP Detail
Alliance Variant
Chr6:29025805 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1635 bp distal
SNP C/T C C C C C C T C C C C C C C
rs239975843
MGI SNP Detail
Alliance Variant
Chr6:29025812 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1642 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265492515
MGI SNP Detail
Alliance Variant
Chr6:29025920 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1750 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223413217
MGI SNP Detail
Alliance Variant
Chr6:29025942 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1772 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29598966
MGI SNP Detail
Alliance Variant
Chr6:29025946 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1776 bp distal
SNP A/C C C C C C C C C C A C A C
rs261900007
MGI SNP Detail
Alliance Variant
Chr6:29025947 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1777 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29598968
MGI SNP Detail
Alliance Variant
Chr6:29025995 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1825 bp distal
SNP C/T C C C C C C T C C C C C C C
rs243691167
MGI SNP Detail
Alliance Variant
Chr6:29026011 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1841 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29598970
MGI SNP Detail
Alliance Variant
Chr6:29026032 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1862 bp distal
SNP G/T G G G G G G T G G G G G G G
rs228595362
MGI SNP Detail
Alliance Variant
Chr6:29026038 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1868 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29598972
MGI SNP Detail
Alliance Variant
Chr6:29026050 Gm3294 Intron
Gm3294 Noncoding-Transcript-Variant
Rr379121 within coordinates of
Rr627480 1880 bp distal
SNP C/T T T T T T T C T T T C T C T
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 103

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
07/22/2025
MGI 6.24
The Jackson Laboratory