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Mouse SNP Summary
Symbol
Name
ID
Rr627592
regulatory region 627592
MGI:8089724

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Showing SNP(s) 1 - 54 of 54

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262514704
MGI SNP Detail
Alliance Variant
Chr6:29535009 Irf5 Intron
Rr627592 1958 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs213675985
MGI SNP Detail
Alliance Variant
Chr6:29535020 Irf5 Intron
Rr627592 1947 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231046648
MGI SNP Detail
Alliance Variant
Chr6:29535084 Irf5 Intron
Rr627592 1883 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248497166
MGI SNP Detail
Alliance Variant
Chr6:29535391 Irf5 Coding-Synonymous
Rr627592 1576 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs222993950
MGI SNP Detail
Alliance Variant
Chr6:29535536 Irf5 Intron
Rr627592 1431 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250544895
MGI SNP Detail
Alliance Variant
Chr6:29535539 Irf5 Intron
Rr627592 1428 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29612676
MGI SNP Detail
Alliance Variant
Chr6:29535588 Irf5 Intron
Rr627592 1379 bp proximal
SNP C/T C C C C C C C C C C T C C C C
rs259714691
MGI SNP Detail
Alliance Variant
Chr6:29535769 Irf5 Coding-NonSynonymous
Rr627592 1198 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223972367
MGI SNP Detail
Alliance Variant
Chr6:29535926 Irf5 Coding-Synonymous
Rr627592 1041 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243845710
MGI SNP Detail
Alliance Variant
Chr6:29536098 Irf5 Coding-Synonymous
Rr627592 869 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257232857
MGI SNP Detail
Alliance Variant
Chr6:29536336 Irf5 Intron
Rr627592 631 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218553821
MGI SNP Detail
Alliance Variant
Chr6:29536342 Irf5 Intron
Rr627592 625 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237185531
MGI SNP Detail
Alliance Variant
Chr6:29536366 Irf5 Intron
Rr627592 601 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs584812035
MGI SNP Detail
Alliance Variant
Chr6:29536398 Irf5 Intron
Rr627592 569 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261278762
MGI SNP Detail
Alliance Variant
Chr6:29536408 Irf5 Intron
Rr627592 559 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs29612678
MGI SNP Detail
Alliance Variant
Chr6:29536547 Irf5 Coding-Synonymous
Rr627592 420 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs258156314
MGI SNP Detail
Alliance Variant
Chr6:29536773 Irf5 Coding-NonSynonymous
Irf5 Intron
Rr627592 194 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263112549
MGI SNP Detail
Alliance Variant
Chr6:29536806 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 161 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232362854
MGI SNP Detail
Alliance Variant
Chr6:29536876 Irf5 Intron
Irf5 mRNA-UTR
Rr627591 within coordinates of
Rr627592 91 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs244667987
MGI SNP Detail
Alliance Variant
Chr6:29536893 Irf5 Intron
Irf5 mRNA-UTR
Rr627591 within coordinates of
Rr627592 74 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs50072964
MGI SNP Detail
Alliance Variant
Chr6:29536913 Irf5 Intron
Irf5 mRNA-UTR
Rr627591 within coordinates of
Rr627592 54 bp proximal
SNP A A A A
rs213740626
MGI SNP Detail
Alliance Variant
Chr6:29537045 Irf5 Intron
Irf5 mRNA-UTR
Rr627591 within coordinates of
Rr627592 57 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230758032
MGI SNP Detail
Alliance Variant
Chr6:29537168 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 180 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242370212
MGI SNP Detail
Alliance Variant
Chr6:29537171 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 183 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217613798
MGI SNP Detail
Alliance Variant
Chr6:29537205 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 217 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29612680
MGI SNP Detail
Alliance Variant
Chr6:29537257 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 269 bp distal
SNP C/T C C C C C T C C C T C C C C
rs29612682
MGI SNP Detail
Alliance Variant
Chr6:29537375 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 387 bp distal
SNP A/G A A A A A A G A A A G A A G A
rs29613484
MGI SNP Detail
Alliance Variant
Chr6:29537409 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 421 bp distal
SNP C/T T T T T T T T T T C T T T
rs238845740
MGI SNP Detail
Alliance Variant
Chr6:29537445 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 457 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs250979896
MGI SNP Detail
Alliance Variant
Chr6:29537690 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 702 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C
rs218649363
MGI SNP Detail
Alliance Variant
Chr6:29537716 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 728 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T C
rs236899567
MGI SNP Detail
Alliance Variant
Chr6:29537844 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 856 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs261013571
MGI SNP Detail
Alliance Variant
Chr6:29537986 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 998 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226214847
MGI SNP Detail
Alliance Variant
Chr6:29538025 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1037 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246337784
MGI SNP Detail
Alliance Variant
Chr6:29538089 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1101 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs579111823
MGI SNP Detail
Alliance Variant
Chr6:29538155 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1167 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582136945
MGI SNP Detail
Alliance Variant
Chr6:29538158 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1170 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584427907
MGI SNP Detail
Alliance Variant
Chr6:29538159 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1171 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578319111
MGI SNP Detail
Alliance Variant
Chr6:29538170 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1182 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230754071
MGI SNP Detail
Alliance Variant
Chr6:29538275 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1287 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244724696
MGI SNP Detail
Alliance Variant
Chr6:29538321 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1333 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255631308
MGI SNP Detail
Alliance Variant
Chr6:29538325 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1337 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224554195
MGI SNP Detail
Alliance Variant
Chr6:29538425 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1437 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29613486
MGI SNP Detail
Alliance Variant
Chr6:29538428 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1440 bp distal
SNP A/G G G G G G G G G G G G G G A G
rs219271712
MGI SNP Detail
Alliance Variant
Chr6:29538449 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1461 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs242554226
MGI SNP Detail
Alliance Variant
Chr6:29538526 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1538 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G T G G G G G G G G G G G G G G G G G G G
rs253497766
MGI SNP Detail
Alliance Variant
Chr6:29538527 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1539 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A C A A A A A A A A A A A A A A A A A A A
rs29613488
MGI SNP Detail
Alliance Variant
Chr6:29538598 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1610 bp distal
SNP C/T C C C C C C C C C C C C C T C
rs233246969
MGI SNP Detail
Alliance Variant
Chr6:29538782 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1794 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs251450327
MGI SNP Detail
Alliance Variant
Chr6:29538863 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1875 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218705459
MGI SNP Detail
Alliance Variant
Chr6:29538864 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1876 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs229742082
MGI SNP Detail
Alliance Variant
Chr6:29538871 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1883 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs254942485
MGI SNP Detail
Alliance Variant
Chr6:29538891 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1903 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs225386372
MGI SNP Detail
Alliance Variant
Chr6:29538975 Irf5 Intron
Irf5 mRNA-UTR
Rr627592 1987 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 54 of 54

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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory