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Mouse SNP Summary
Symbol
Name
ID
Rr627593
regulatory region 627593
MGI:8089725

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Showing SNP(s) 1 - 81 of 81

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248947823
MGI SNP Detail
Alliance Variant
Chr6:29539017 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1982 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs258585199
MGI SNP Detail
Alliance Variant
Chr6:29539021 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1978 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs223091605
MGI SNP Detail
Alliance Variant
Chr6:29539058 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1941 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237452177
MGI SNP Detail
Alliance Variant
Chr6:29539101 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1898 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254509687
MGI SNP Detail
Alliance Variant
Chr6:29539112 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1887 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224631182
MGI SNP Detail
Alliance Variant
Chr6:29539127 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1872 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs236007876
MGI SNP Detail
Alliance Variant
Chr6:29539134 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1865 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs266165856
MGI SNP Detail
Alliance Variant
Chr6:29539154 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1845 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs233154835
MGI SNP Detail
Alliance Variant
Chr6:29539312 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1687 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258328166
MGI SNP Detail
Alliance Variant
Chr6:29539313 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1686 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs216208643
MGI SNP Detail
Alliance Variant
Chr6:29539341 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1658 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226946627
MGI SNP Detail
Alliance Variant
Chr6:29539371 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1628 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs245296824
MGI SNP Detail
Alliance Variant
Chr6:29539382 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1617 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs213114188
MGI SNP Detail
Alliance Variant
Chr6:29539428 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1571 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs29613490
MGI SNP Detail
Alliance Variant
Chr6:29539495 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1504 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs229751812
MGI SNP Detail
Alliance Variant
Chr6:29539524 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1475 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs260688350
MGI SNP Detail
Alliance Variant
Chr6:29539525 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1474 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29613492
MGI SNP Detail
Alliance Variant
Chr6:29539572 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1427 bp proximal
SNP C/G G G G G G G C G G G C G G C G
rs238388000
MGI SNP Detail
Alliance Variant
Chr6:29539580 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1419 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29614434
MGI SNP Detail
Alliance Variant
Chr6:29539631 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1368 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs29614436
MGI SNP Detail
Alliance Variant
Chr6:29539642 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1357 bp proximal
SNP A/C A A A A A A C A A A C A A C A
rs29614438
MGI SNP Detail
Alliance Variant
Chr6:29539684 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1315 bp proximal
SNP C/T C C C C C C T C C T C C T C
rs580438730
MGI SNP Detail
Alliance Variant
Chr6:29539718 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1281 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29614440
MGI SNP Detail
Alliance Variant
Chr6:29539752 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1247 bp proximal
SNP C/T C C C C C C T C C C T C C C
rs217811437
MGI SNP Detail
Alliance Variant
Chr6:29539766 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1233 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29614442
MGI SNP Detail
Alliance Variant
Chr6:29539835 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1164 bp proximal
SNP A/G A A A A A A G A A A G A A G A
rs29615334
MGI SNP Detail
Alliance Variant
Chr6:29539868 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1131 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs234266062
MGI SNP Detail
Alliance Variant
Chr6:29539902 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1097 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs246570450
MGI SNP Detail
Alliance Variant
Chr6:29539906 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1093 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs265521666
MGI SNP Detail
Alliance Variant
Chr6:29539907 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1092 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs226959161
MGI SNP Detail
Alliance Variant
Chr6:29539940 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1059 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245306847
MGI SNP Detail
Alliance Variant
Chr6:29539976 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 1023 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs213184176
MGI SNP Detail
Alliance Variant
Chr6:29540109 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 890 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224441302
MGI SNP Detail
Alliance Variant
Chr6:29540126 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 873 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260449595
MGI SNP Detail
Alliance Variant
Chr6:29540207 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 792 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29615336
MGI SNP Detail
Alliance Variant
Chr6:29540240 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 759 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs240711050
MGI SNP Detail
Alliance Variant
Chr6:29540252 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 747 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585966326
MGI SNP Detail
Alliance Variant
Chr6:29540353 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 646 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258365091
MGI SNP Detail
Alliance Variant
Chr6:29540405 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 594 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214046188
MGI SNP Detail
Alliance Variant
Chr6:29540407 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 592 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231400632
MGI SNP Detail
Alliance Variant
Chr6:29540421 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 578 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248868476
MGI SNP Detail
Alliance Variant
Chr6:29540423 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 576 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217929070
MGI SNP Detail
Alliance Variant
Chr6:29540436 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 563 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240214815
MGI SNP Detail
Alliance Variant
Chr6:29540438 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 561 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs263688855
MGI SNP Detail
Alliance Variant
Chr6:29540439 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 560 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226006952
MGI SNP Detail
Alliance Variant
Chr6:29540483 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 516 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs249285216
MGI SNP Detail
Alliance Variant
Chr6:29540496 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 503 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263220264
MGI SNP Detail
Alliance Variant
Chr6:29540513 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 486 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29615338
MGI SNP Detail
Alliance Variant
Chr6:29540678 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 321 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs239295333
MGI SNP Detail
Alliance Variant
Chr6:29540708 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 291 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29615340
MGI SNP Detail
Alliance Variant
Chr6:29540729 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 270 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs224550875
MGI SNP Detail
Alliance Variant
Chr6:29540759 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 240 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255018881
MGI SNP Detail
Alliance Variant
Chr6:29540772 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 227 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265994634
MGI SNP Detail
Alliance Variant
Chr6:29541017 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 within coordinates of
Tnpo3 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232179781
MGI SNP Detail
Alliance Variant
Chr6:29541041 Irf5 Intron
Irf5 mRNA-UTR
Rr627593 within coordinates of
Tnpo3 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs29615342
MGI SNP Detail
Alliance Variant
Chr6:29541164 Irf5 Intron
Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 within coordinates of
Tnpo3 mRNA-UTR
SNP A/G A A A A A A G A A A G A A G A
rs214108593
MGI SNP Detail
Alliance Variant
Chr6:29541254 Irf5 Intron
Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 within coordinates of
Tnpo3 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586999185
MGI SNP Detail
Alliance Variant
Chr6:29541371 Irf5 Intron
Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 74 bp distal
Tnpo3 mRNA-UTR
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs231161582
MGI SNP Detail
Alliance Variant
Chr6:29541378 Irf5 Intron
Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 81 bp distal
Tnpo3 mRNA-UTR
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242741204
MGI SNP Detail
Alliance Variant
Chr6:29541410 Irf5 Intron
Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 113 bp distal
Tnpo3 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212094341
MGI SNP Detail
Alliance Variant
Chr6:29541416 Irf5 Intron
Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 119 bp distal
Tnpo3 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243007348
MGI SNP Detail
Alliance Variant
Chr6:29541426 Irf5 Intron
Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 129 bp distal
Tnpo3 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260151775
MGI SNP Detail
Alliance Variant
Chr6:29541685 Irf5 Coding-NonSynonymous
Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 388 bp distal
Tnpo3 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224986176
MGI SNP Detail
Alliance Variant
Chr6:29541759 Irf5 mRNA-UTR
Irf5 Noncoding-Transcript-Variant
Rr627593 462 bp distal
Tnpo3 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs238864162
MGI SNP Detail
Alliance Variant
Chr6:29541927 Rr627593 630 bp distal
Tnpo3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252992110
MGI SNP Detail
Alliance Variant
Chr6:29541940 Rr627593 643 bp distal
Tnpo3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs220425790
MGI SNP Detail
Alliance Variant
Chr6:29541945 Rr627593 648 bp distal
Tnpo3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs238995943
MGI SNP Detail
Alliance Variant
Chr6:29541965 Rr627593 668 bp distal
Tnpo3 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256845753
MGI SNP Detail
Alliance Variant
Chr6:29541977 Rr627593 680 bp distal
Tnpo3 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29616224
MGI SNP Detail
Alliance Variant
Chr6:29542015 Rr627593 718 bp distal
Tnpo3 Intron
SNP C/G G G G G G G C G G G C G G C G
rs29616226
MGI SNP Detail
Alliance Variant
Chr6:29542169 Rr627593 872 bp distal
Tnpo3 Intron
SNP A/T A A A A A A T A A A T A A T A
rs29616228
MGI SNP Detail
Alliance Variant
Chr6:29542253 Rr627593 956 bp distal
Tnpo3 Intron
SNP A/T T T T T T A T T T A T T T
rs233405626
MGI SNP Detail
Alliance Variant
Chr6:29542520 Rr627593 1223 bp distal
Tnpo3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A
rs252067441
MGI SNP Detail
Alliance Variant
Chr6:29542584 Rr627593 1287 bp distal
Tnpo3 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs256070550
MGI SNP Detail
Alliance Variant
Chr6:29542589 Rr627593 1292 bp distal
Tnpo3 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29616230
MGI SNP Detail
Alliance Variant
Chr6:29542651 Rr627593 1354 bp distal
Tnpo3 Intron
SNP G/T T T T T T T G T T T G T T G T
rs29616232
MGI SNP Detail
Alliance Variant
Chr6:29542755 Rr627593 1458 bp distal
Tnpo3 Intron
SNP A/G A A A A A A A A A G A A A
rs29617264
MGI SNP Detail
Alliance Variant
Chr6:29542769 Rr627593 1472 bp distal
Tnpo3 Intron
SNP C/T T T T T T T C T T T C T T T
rs29617266
MGI SNP Detail
Alliance Variant
Chr6:29542952 Rr627593 1655 bp distal
Tnpo3 Intron
SNP A/T T T T T T T A T T T A T T A T
rs29617267
MGI SNP Detail
Alliance Variant
Chr6:29543200 Rr627593 1903 bp distal
Tnpo3 Intron
SNP C/T C C C C C C T C C C T C C T C
rs216553935
MGI SNP Detail
Alliance Variant
Chr6:29543246 Rr627593 1949 bp distal
Tnpo3 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 81 of 81

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory