Symbol Name ID |
Rr627593
regulatory region 627593 MGI:8089725 |
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SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs248947823 MGI SNP Detail Alliance Variant |
Chr6:29539017 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | |
rs258585199 MGI SNP Detail Alliance Variant |
Chr6:29539021 | Irf5 Irf5 Rr627593 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | |
rs223091605 MGI SNP Detail Alliance Variant |
Chr6:29539058 | Irf5 Irf5 Rr627593 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |
rs237452177 MGI SNP Detail Alliance Variant |
Chr6:29539101 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs254509687 MGI SNP Detail Alliance Variant |
Chr6:29539112 | Irf5 Irf5 Rr627593 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs224631182 MGI SNP Detail Alliance Variant |
Chr6:29539127 | Irf5 Irf5 Rr627593 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | T | A | A | A | A | T | A | A | A | A | A | T | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | |
rs236007876 MGI SNP Detail Alliance Variant |
Chr6:29539134 | Irf5 Irf5 Rr627593 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | G | C | C | C | C | G | C | C | C | C | C | G | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | |
rs266165856 MGI SNP Detail Alliance Variant |
Chr6:29539154 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |
rs233154835 MGI SNP Detail Alliance Variant |
Chr6:29539312 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs258328166 MGI SNP Detail Alliance Variant |
Chr6:29539313 | Irf5 Irf5 Rr627593 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |
rs216208643 MGI SNP Detail Alliance Variant |
Chr6:29539341 | Irf5 Irf5 Rr627593 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |
rs226946627 MGI SNP Detail Alliance Variant |
Chr6:29539371 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | |
rs245296824 MGI SNP Detail Alliance Variant |
Chr6:29539382 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | |
rs213114188 MGI SNP Detail Alliance Variant |
Chr6:29539428 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |
rs29613490 MGI SNP Detail Alliance Variant |
Chr6:29539495 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | T | C | C | T | C | |||||||||||||||||||||||||||||||||||||||
rs229751812 MGI SNP Detail Alliance Variant |
Chr6:29539524 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |
rs260688350 MGI SNP Detail Alliance Variant |
Chr6:29539525 | Irf5 Irf5 Rr627593 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs29613492 MGI SNP Detail Alliance Variant |
Chr6:29539572 | Irf5 Irf5 Rr627593 |
SNP | C/G | G | G | G | G | G | G | C | G | G | G | C | G | G | C | G | |||||||||||||||||||||||||||||||||||||||
rs238388000 MGI SNP Detail Alliance Variant |
Chr6:29539580 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs29614434 MGI SNP Detail Alliance Variant |
Chr6:29539631 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | C | T | T | C | T | |||||||||||||||||||||||||||||||||||||||
rs29614436 MGI SNP Detail Alliance Variant |
Chr6:29539642 | Irf5 Irf5 Rr627593 |
SNP | A/C | A | A | A | A | A | A | C | A | A | A | C | A | A | C | A | |||||||||||||||||||||||||||||||||||||||
rs29614438 MGI SNP Detail Alliance Variant |
Chr6:29539684 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | T | C | C | T | C | C | T | C | ||||||||||||||||||||||||||||||||||||||||
rs580438730 MGI SNP Detail Alliance Variant |
Chr6:29539718 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs29614440 MGI SNP Detail Alliance Variant |
Chr6:29539752 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | T | C | C | C | ||||||||||||||||||||||||||||||||||||||||
rs217811437 MGI SNP Detail Alliance Variant |
Chr6:29539766 | Irf5 Irf5 Rr627593 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs29614442 MGI SNP Detail Alliance Variant |
Chr6:29539835 | Irf5 Irf5 Rr627593 |
SNP | A/G | A | A | A | A | A | A | G | A | A | A | G | A | A | G | A | |||||||||||||||||||||||||||||||||||||||
rs29615334 MGI SNP Detail Alliance Variant |
Chr6:29539868 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | C | T | T | C | T | |||||||||||||||||||||||||||||||||||||||
rs234266062 MGI SNP Detail Alliance Variant |
Chr6:29539902 | Irf5 Irf5 Rr627593 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | |
rs246570450 MGI SNP Detail Alliance Variant |
Chr6:29539906 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |
rs265521666 MGI SNP Detail Alliance Variant |
Chr6:29539907 | Irf5 Irf5 Rr627593 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | |
rs226959161 MGI SNP Detail Alliance Variant |
Chr6:29539940 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs245306847 MGI SNP Detail Alliance Variant |
Chr6:29539976 | Irf5 Irf5 Rr627593 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | G | T | T | T | T | G | T | T | T | T | T | G | T | T | T | T | T | T | G | T | T | T | T | T | T | T | G | T | T | T | T | |
rs213184176 MGI SNP Detail Alliance Variant |
Chr6:29540109 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs224441302 MGI SNP Detail Alliance Variant |
Chr6:29540126 | Irf5 Irf5 Rr627593 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |
rs260449595 MGI SNP Detail Alliance Variant |
Chr6:29540207 | Irf5 Irf5 Rr627593 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |
rs29615336 MGI SNP Detail Alliance Variant |
Chr6:29540240 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | T | C | C | T | C | |||||||||||||||||||||||||||||||||||||||
rs240711050 MGI SNP Detail Alliance Variant |
Chr6:29540252 | Irf5 Irf5 Rr627593 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
rs585966326 MGI SNP Detail Alliance Variant |
Chr6:29540353 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs258365091 MGI SNP Detail Alliance Variant |
Chr6:29540405 | Irf5 Irf5 Rr627593 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
rs214046188 MGI SNP Detail Alliance Variant |
Chr6:29540407 | Irf5 Irf5 Rr627593 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |
rs231400632 MGI SNP Detail Alliance Variant |
Chr6:29540421 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs248868476 MGI SNP Detail Alliance Variant |
Chr6:29540423 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs217929070 MGI SNP Detail Alliance Variant |
Chr6:29540436 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs240214815 MGI SNP Detail Alliance Variant |
Chr6:29540438 | Irf5 Irf5 Rr627593 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | G | |
rs263688855 MGI SNP Detail Alliance Variant |
Chr6:29540439 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs226006952 MGI SNP Detail Alliance Variant |
Chr6:29540483 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | |
rs249285216 MGI SNP Detail Alliance Variant |
Chr6:29540496 | Irf5 Irf5 Rr627593 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs263220264 MGI SNP Detail Alliance Variant |
Chr6:29540513 | Irf5 Irf5 Rr627593 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
rs29615338 MGI SNP Detail Alliance Variant |
Chr6:29540678 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | T | C | C | T | C | |||||||||||||||||||||||||||||||||||||||
rs239295333 MGI SNP Detail Alliance Variant |
Chr6:29540708 | Irf5 Irf5 Rr627593 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs29615340 MGI SNP Detail Alliance Variant |
Chr6:29540729 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | C | T | T | C | T | |||||||||||||||||||||||||||||||||||||||
rs224550875 MGI SNP Detail Alliance Variant |
Chr6:29540759 | Irf5 Irf5 Rr627593 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs255018881 MGI SNP Detail Alliance Variant |
Chr6:29540772 | Irf5 Irf5 Rr627593 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |
rs265994634 MGI SNP Detail Alliance Variant |
Chr6:29541017 | Irf5 Irf5 Rr627593 Tnpo3 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | ||
rs232179781 MGI SNP Detail Alliance Variant |
Chr6:29541041 | Irf5 Irf5 Rr627593 Tnpo3 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |
rs29615342 MGI SNP Detail Alliance Variant |
Chr6:29541164 | Irf5 Irf5 Irf5 Rr627593 Tnpo3 |
SNP | A/G | A | A | A | A | A | A | G | A | A | A | G | A | A | G | A | |||||||||||||||||||||||||||||||||||||||
rs214108593 MGI SNP Detail Alliance Variant |
Chr6:29541254 | Irf5 Irf5 Irf5 Rr627593 Tnpo3 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs586999185 MGI SNP Detail Alliance Variant |
Chr6:29541371 | Irf5 Irf5 Irf5 Rr627593 Tnpo3 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | |
rs231161582 MGI SNP Detail Alliance Variant |
Chr6:29541378 | Irf5 Irf5 Irf5 Rr627593 Tnpo3 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | ||
rs242741204 MGI SNP Detail Alliance Variant |
Chr6:29541410 | Irf5 Irf5 Irf5 Rr627593 Tnpo3 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs212094341 MGI SNP Detail Alliance Variant |
Chr6:29541416 | Irf5 Irf5 Irf5 Rr627593 Tnpo3 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs243007348 MGI SNP Detail Alliance Variant |
Chr6:29541426 | Irf5 Irf5 Irf5 Rr627593 Tnpo3 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
rs260151775 MGI SNP Detail Alliance Variant |
Chr6:29541685 | Irf5 Irf5 Irf5 Rr627593 Tnpo3 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
rs224986176 MGI SNP Detail Alliance Variant |
Chr6:29541759 | Irf5 Irf5 Rr627593 Tnpo3 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | |
rs238864162 MGI SNP Detail Alliance Variant |
Chr6:29541927 | Rr627593 Tnpo3 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
rs252992110 MGI SNP Detail Alliance Variant |
Chr6:29541940 | Rr627593 Tnpo3 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | |
rs220425790 MGI SNP Detail Alliance Variant |
Chr6:29541945 | Rr627593 Tnpo3 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |
rs238995943 MGI SNP Detail Alliance Variant |
Chr6:29541965 | Rr627593 Tnpo3 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |
rs256845753 MGI SNP Detail Alliance Variant |
Chr6:29541977 | Rr627593 Tnpo3 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
rs29616224 MGI SNP Detail Alliance Variant |
Chr6:29542015 | Rr627593 Tnpo3 |
SNP | C/G | G | G | G | G | G | G | C | G | G | G | C | G | G | C | G | |||||||||||||||||||||||||||||||||||||||
rs29616226 MGI SNP Detail Alliance Variant |
Chr6:29542169 | Rr627593 Tnpo3 |
SNP | A/T | A | A | A | A | A | A | T | A | A | A | T | A | A | T | A | |||||||||||||||||||||||||||||||||||||||
rs29616228 MGI SNP Detail Alliance Variant |
Chr6:29542253 | Rr627593 Tnpo3 |
SNP | A/T | T | T | T | T | T | A | T | T | T | A | T | T | T | |||||||||||||||||||||||||||||||||||||||||
rs233405626 MGI SNP Detail Alliance Variant |
Chr6:29542520 | Rr627593 Tnpo3 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | C | A | A | A | A | C | A | A | A | A | A | C | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A | A | ||
rs252067441 MGI SNP Detail Alliance Variant |
Chr6:29542584 | Rr627593 Tnpo3 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | ||
rs256070550 MGI SNP Detail Alliance Variant |
Chr6:29542589 | Rr627593 Tnpo3 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | ||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
rs29616230 MGI SNP Detail Alliance Variant |
Chr6:29542651 | Rr627593 Tnpo3 |
SNP | G/T | T | T | T | T | T | T | G | T | T | T | G | T | T | G | T | |||||||||||||||||||||||||||||||||||||||
rs29616232 MGI SNP Detail Alliance Variant |
Chr6:29542755 | Rr627593 Tnpo3 |
SNP | A/G | A | A | A | A | A | A | A | A | A | G | A | A | A | |||||||||||||||||||||||||||||||||||||||||
rs29617264 MGI SNP Detail Alliance Variant |
Chr6:29542769 | Rr627593 Tnpo3 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | C | T | T | T | ||||||||||||||||||||||||||||||||||||||||
rs29617266 MGI SNP Detail Alliance Variant |
Chr6:29542952 | Rr627593 Tnpo3 |
SNP | A/T | T | T | T | T | T | T | A | T | T | T | A | T | T | A | T | |||||||||||||||||||||||||||||||||||||||
rs29617267 MGI SNP Detail Alliance Variant |
Chr6:29543200 | Rr627593 Tnpo3 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | T | C | C | T | C | |||||||||||||||||||||||||||||||||||||||
rs216553935 MGI SNP Detail Alliance Variant |
Chr6:29543246 | Rr627593 Tnpo3 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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