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Mouse SNP Summary
Symbol
Name
ID 		Rr627648
regulatory region 627648
MGI:8089780

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Showing SNP(s) 1 - 54 of 54

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29643929
MGI SNP Detail
Alliance Variant		 Chr6:29825540 Ahcyl2 Intron
Rr627648 1792 bp proximal
 SNP A/G A A A A A A G A A A G A A G A
rs29643931
MGI SNP Detail
Alliance Variant		 Chr6:29825604 Ahcyl2 Intron
Rr627648 1728 bp proximal
 SNP A/G G G G G G G A G G G G G G G G
rs29643933
MGI SNP Detail
Alliance Variant		 Chr6:29825609 Ahcyl2 Intron
Rr627648 1723 bp proximal
 SNP C/T T T T T T T T T T T C T T T T
rs232378403
MGI SNP Detail
Alliance Variant		 Chr6:29825717 Ahcyl2 Intron
Rr627648 1615 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs249928548
MGI SNP Detail
Alliance Variant		 Chr6:29825845 Ahcyl2 Intron
Rr627648 1487 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29644755
MGI SNP Detail
Alliance Variant		 Chr6:29825880 Ahcyl2 Intron
Rr627648 1452 bp proximal
 SNP A/G A A A A A A A A A G A A G A
rs235684097
MGI SNP Detail
Alliance Variant		 Chr6:29825887 Ahcyl2 Intron
Rr627648 1445 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260656306
MGI SNP Detail
Alliance Variant		 Chr6:29825888 Ahcyl2 Intron
Rr627648 1444 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29644757
MGI SNP Detail
Alliance Variant		 Chr6:29825950 Ahcyl2 Intron
Rr627648 1382 bp proximal
 SNP A/G G G G G G G G G G G A G G G G
rs225760868
MGI SNP Detail
Alliance Variant		 Chr6:29825959 Ahcyl2 Intron
Rr627648 1373 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245914806
MGI SNP Detail
Alliance Variant		 Chr6:29826042 Ahcyl2 Intron
Rr627648 1290 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265503176
MGI SNP Detail
Alliance Variant		 Chr6:29826220 Ahcyl2 Intron
Rr627648 1112 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226491032
MGI SNP Detail
Alliance Variant		 Chr6:29826306 Ahcyl2 Intron
Rr627648 1026 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238742673
MGI SNP Detail
Alliance Variant		 Chr6:29826399 Ahcyl2 Intron
Rr627648 933 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256654499
MGI SNP Detail
Alliance Variant		 Chr6:29826407 Ahcyl2 Intron
Rr627648 925 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs225185796
MGI SNP Detail
Alliance Variant		 Chr6:29826444 Ahcyl2 Intron
Rr627648 888 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243670352
MGI SNP Detail
Alliance Variant		 Chr6:29826536 Ahcyl2 Intron
Rr627648 796 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs219403306
MGI SNP Detail
Alliance Variant		 Chr6:29826548 Ahcyl2 Intron
Rr627648 784 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29644759
MGI SNP Detail
Alliance Variant		 Chr6:29826575 Ahcyl2 Intron
Rr627648 757 bp proximal
 SNP G/T G G G G G G G G G G G G G T G
rs253194912
MGI SNP Detail
Alliance Variant		 Chr6:29826829 Ahcyl2 Intron
Rr627648 503 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216646278
MGI SNP Detail
Alliance Variant		 Chr6:29826883 Ahcyl2 Intron
Rr627648 449 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29644761
MGI SNP Detail
Alliance Variant		 Chr6:29826928 Ahcyl2 Intron
Rr627648 404 bp proximal
 SNP A/G A A A A A A A A A A G A A A A
rs29644763
MGI SNP Detail
Alliance Variant		 Chr6:29827429 Ahcyl2 Intron
Rr627648 within coordinates of
 SNP C/T T T T T T T C T T T C T T C T
rs250024942
MGI SNP Detail
Alliance Variant		 Chr6:29827484 Ahcyl2 Intron
Rr627648 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213149249
MGI SNP Detail
Alliance Variant		 Chr6:29827512 Ahcyl2 Intron
Rr627648 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29645715
MGI SNP Detail
Alliance Variant		 Chr6:29827538 Ahcyl2 Intron
Rr627648 within coordinates of
 SNP G/T G G G G G G T G G G G G G G G
rs264100154
MGI SNP Detail
Alliance Variant		 Chr6:29827607 Ahcyl2 Intron
Rr627648 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225509710
MGI SNP Detail
Alliance Variant		 Chr6:29827669 Ahcyl2 Intron
Rr627648 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs240587167
MGI SNP Detail
Alliance Variant		 Chr6:29827868 Ahcyl2 Intron
Rr627648 127 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs258283122
MGI SNP Detail
Alliance Variant		 Chr6:29827977 Ahcyl2 Intron
Rr627648 236 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220296644
MGI SNP Detail
Alliance Variant		 Chr6:29828210 Ahcyl2 Intron
Rr627648 469 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29645717
MGI SNP Detail
Alliance Variant		 Chr6:29828229 Ahcyl2 Intron
Rr627648 488 bp distal
 SNP A/G G G G G G G G G G G A G G G G
rs29645719
MGI SNP Detail
Alliance Variant		 Chr6:29828241 Ahcyl2 Intron
Rr627648 500 bp distal
 SNP A/G G G G G G G G G G G A G G G G
rs238835274
MGI SNP Detail
Alliance Variant		 Chr6:29828321 Ahcyl2 Intron
Rr627648 580 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256691953
MGI SNP Detail
Alliance Variant		 Chr6:29828351 Ahcyl2 Intron
Rr627648 610 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218027605
MGI SNP Detail
Alliance Variant		 Chr6:29828355 Ahcyl2 Intron
Rr627648 614 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248185610
MGI SNP Detail
Alliance Variant		 Chr6:29828481 Ahcyl2 Intron
Rr627648 740 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs266187712
MGI SNP Detail
Alliance Variant		 Chr6:29828496 Ahcyl2 Intron
Rr627648 755 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233237628
MGI SNP Detail
Alliance Variant		 Chr6:29828543 Ahcyl2 Intron
Rr627648 802 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258397713
MGI SNP Detail
Alliance Variant		 Chr6:29828618 Ahcyl2 Intron
Rr627648 877 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29645721
MGI SNP Detail
Alliance Variant		 Chr6:29828656 Ahcyl2 Intron
Rr627648 915 bp distal
 SNP C/T C C C C C C C C C C C C C T C
rs29645723
MGI SNP Detail
Alliance Variant		 Chr6:29828670 Ahcyl2 Intron
Rr627648 929 bp distal
 SNP C/T C C C C C C C C C C C C C T C
rs29646635
MGI SNP Detail
Alliance Variant		 Chr6:29828772 Ahcyl2 Intron
Rr627648 1031 bp distal
Rr627649 within coordinates of
 SNP C/T C C C C C C T C C C T C C T C
rs213224679
MGI SNP Detail
Alliance Variant		 Chr6:29828824 Ahcyl2 Intron
Rr627648 1083 bp distal
Rr627649 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230269078
MGI SNP Detail
Alliance Variant		 Chr6:29828875 Ahcyl2 Intron
Rr627648 1134 bp distal
Rr627649 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254925921
MGI SNP Detail
Alliance Variant		 Chr6:29828934 Ahcyl2 Intron
Rr627648 1193 bp distal
Rr627649 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217838471
MGI SNP Detail
Alliance Variant		 Chr6:29829107 Ahcyl2 Intron
Rr627648 1366 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238448330
MGI SNP Detail
Alliance Variant		 Chr6:29829238 Ahcyl2 Intron
Rr627648 1497 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262745681
MGI SNP Detail
Alliance Variant		 Chr6:29829247 Ahcyl2 Intron
Rr627648 1506 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs219954032
MGI SNP Detail
Alliance Variant		 Chr6:29829282 Ahcyl2 Intron
Rr627648 1541 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231742157
MGI SNP Detail
Alliance Variant		 Chr6:29829356 Ahcyl2 Intron
Rr627648 1615 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250433165
MGI SNP Detail
Alliance Variant		 Chr6:29829374 Ahcyl2 Intron
Rr627648 1633 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218092453
MGI SNP Detail
Alliance Variant		 Chr6:29829470 Ahcyl2 Intron
Rr627648 1729 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251116094
MGI SNP Detail
Alliance Variant		 Chr6:29829507 Ahcyl2 Intron
Rr627648 1766 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 54 of 54
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory