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Mouse SNP Summary
Symbol
Name
ID
Rr627649
regulatory region 627649
MGI:8089781

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253194912
MGI SNP Detail
Alliance Variant
Chr6:29826829 Ahcyl2 Intron
Rr627649 1850 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216646278
MGI SNP Detail
Alliance Variant
Chr6:29826883 Ahcyl2 Intron
Rr627649 1796 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29644761
MGI SNP Detail
Alliance Variant
Chr6:29826928 Ahcyl2 Intron
Rr627649 1751 bp proximal
SNP A/G A A A A A A A A A A G A A A A
rs29644763
MGI SNP Detail
Alliance Variant
Chr6:29827429 Ahcyl2 Intron
Rr627648 within coordinates of
Rr627649 1250 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs250024942
MGI SNP Detail
Alliance Variant
Chr6:29827484 Ahcyl2 Intron
Rr627648 within coordinates of
Rr627649 1195 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213149249
MGI SNP Detail
Alliance Variant
Chr6:29827512 Ahcyl2 Intron
Rr627648 within coordinates of
Rr627649 1167 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29645715
MGI SNP Detail
Alliance Variant
Chr6:29827538 Ahcyl2 Intron
Rr627648 within coordinates of
Rr627649 1141 bp proximal
SNP G/T G G G G G G T G G G G G G G G
rs264100154
MGI SNP Detail
Alliance Variant
Chr6:29827607 Ahcyl2 Intron
Rr627648 within coordinates of
Rr627649 1072 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225509710
MGI SNP Detail
Alliance Variant
Chr6:29827669 Ahcyl2 Intron
Rr627648 within coordinates of
Rr627649 1010 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs240587167
MGI SNP Detail
Alliance Variant
Chr6:29827868 Ahcyl2 Intron
Rr627649 811 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs258283122
MGI SNP Detail
Alliance Variant
Chr6:29827977 Ahcyl2 Intron
Rr627649 702 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220296644
MGI SNP Detail
Alliance Variant
Chr6:29828210 Ahcyl2 Intron
Rr627649 469 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29645717
MGI SNP Detail
Alliance Variant
Chr6:29828229 Ahcyl2 Intron
Rr627649 450 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs29645719
MGI SNP Detail
Alliance Variant
Chr6:29828241 Ahcyl2 Intron
Rr627649 438 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs238835274
MGI SNP Detail
Alliance Variant
Chr6:29828321 Ahcyl2 Intron
Rr627649 358 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256691953
MGI SNP Detail
Alliance Variant
Chr6:29828351 Ahcyl2 Intron
Rr627649 328 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218027605
MGI SNP Detail
Alliance Variant
Chr6:29828355 Ahcyl2 Intron
Rr627649 324 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248185610
MGI SNP Detail
Alliance Variant
Chr6:29828481 Ahcyl2 Intron
Rr627649 198 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs266187712
MGI SNP Detail
Alliance Variant
Chr6:29828496 Ahcyl2 Intron
Rr627649 183 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233237628
MGI SNP Detail
Alliance Variant
Chr6:29828543 Ahcyl2 Intron
Rr627649 136 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258397713
MGI SNP Detail
Alliance Variant
Chr6:29828618 Ahcyl2 Intron
Rr627649 61 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29645721
MGI SNP Detail
Alliance Variant
Chr6:29828656 Ahcyl2 Intron
Rr627649 23 bp proximal
SNP C/T C C C C C C C C C C C C C T C
rs29645723
MGI SNP Detail
Alliance Variant
Chr6:29828670 Ahcyl2 Intron
Rr627649 9 bp proximal
SNP C/T C C C C C C C C C C C C C T C
rs29646635
MGI SNP Detail
Alliance Variant
Chr6:29828772 Ahcyl2 Intron
Rr627649 within coordinates of
SNP C/T C C C C C C T C C C T C C T C
rs213224679
MGI SNP Detail
Alliance Variant
Chr6:29828824 Ahcyl2 Intron
Rr627649 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230269078
MGI SNP Detail
Alliance Variant
Chr6:29828875 Ahcyl2 Intron
Rr627649 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254925921
MGI SNP Detail
Alliance Variant
Chr6:29828934 Ahcyl2 Intron
Rr627649 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217838471
MGI SNP Detail
Alliance Variant
Chr6:29829107 Ahcyl2 Intron
Rr627649 29 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238448330
MGI SNP Detail
Alliance Variant
Chr6:29829238 Ahcyl2 Intron
Rr627649 160 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262745681
MGI SNP Detail
Alliance Variant
Chr6:29829247 Ahcyl2 Intron
Rr627649 169 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs219954032
MGI SNP Detail
Alliance Variant
Chr6:29829282 Ahcyl2 Intron
Rr627649 204 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231742157
MGI SNP Detail
Alliance Variant
Chr6:29829356 Ahcyl2 Intron
Rr627649 278 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250433165
MGI SNP Detail
Alliance Variant
Chr6:29829374 Ahcyl2 Intron
Rr627649 296 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218092453
MGI SNP Detail
Alliance Variant
Chr6:29829470 Ahcyl2 Intron
Rr627649 392 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251116094
MGI SNP Detail
Alliance Variant
Chr6:29829507 Ahcyl2 Intron
Rr627649 429 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29646637
MGI SNP Detail
Alliance Variant
Chr6:29829757 Ahcyl2 Intron
Rr627649 679 bp distal
SNP C/G C C C C C C C C C C G C C C C
rs263952934
MGI SNP Detail
Alliance Variant
Chr6:29829922 Ahcyl2 Intron
Rr627649 844 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226454505
MGI SNP Detail
Alliance Variant
Chr6:29829984 Ahcyl2 Intron
Rr627649 906 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246602061
MGI SNP Detail
Alliance Variant
Chr6:29829987 Ahcyl2 Intron
Rr627649 909 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs257352546
MGI SNP Detail
Alliance Variant
Chr6:29830009 Ahcyl2 Intron
Rr627649 931 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226169769
MGI SNP Detail
Alliance Variant
Chr6:29830045 Ahcyl2 Intron
Rr627649 967 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243875650
MGI SNP Detail
Alliance Variant
Chr6:29830266 Ahcyl2 Intron
Rr627649 1188 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254972385
MGI SNP Detail
Alliance Variant
Chr6:29830270 Ahcyl2 Intron
Rr627649 1192 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578693026
MGI SNP Detail
Alliance Variant
Chr6:29830290 Ahcyl2 Intron
Rr627649 1212 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs582316091
MGI SNP Detail
Alliance Variant
Chr6:29830302 Ahcyl2 Intron
Rr627649 1224 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585378864
MGI SNP Detail
Alliance Variant
Chr6:29830322 Ahcyl2 Intron
Rr627649 1244 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs578470468
MGI SNP Detail
Alliance Variant
Chr6:29830416 Ahcyl2 Intron
Rr627649 1338 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580460631
MGI SNP Detail
Alliance Variant
Chr6:29830513 Ahcyl2 Intron
Rr627649 1435 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583639347
MGI SNP Detail
Alliance Variant
Chr6:29830555 Ahcyl2 Intron
Rr627649 1477 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585721367
MGI SNP Detail
Alliance Variant
Chr6:29830639 Ahcyl2 Intron
Rr627649 1561 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579717430
MGI SNP Detail
Alliance Variant
Chr6:29830670 Ahcyl2 Intron
Rr627649 1592 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C
rs583524798
MGI SNP Detail
Alliance Variant
Chr6:29830821 Ahcyl2 Intron
Rr627649 1743 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs586646070
MGI SNP Detail
Alliance Variant
Chr6:29830829 Ahcyl2 Intron
Rr627649 1751 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G G C
rs580718725
MGI SNP Detail
Alliance Variant
Chr6:29830862 Ahcyl2 Intron
Rr627649 1784 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582987750
MGI SNP Detail
Alliance Variant
Chr6:29830866 Ahcyl2 Intron
Rr627649 1788 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228085114
MGI SNP Detail
Alliance Variant
Chr6:29830891 Ahcyl2 Intron
Rr627649 1813 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 56 of 56

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory

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