About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr627660
regulatory region 627660
MGI:8089792

<< first < prev1 next > last >>
Showing SNP(s) 1 - 62 of 62

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238038825
MGI SNP Detail
Alliance Variant
Chr6:29856499 Ahcyl2 Intron
Rr627660 1954 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29642702
MGI SNP Detail
Alliance Variant
Chr6:29856502 Ahcyl2 Intron
Rr627660 1951 bp proximal
SNP A/G G G G G G G A G G G A G G A G
rs212071337
MGI SNP Detail
Alliance Variant
Chr6:29856527 Ahcyl2 Intron
Rr627660 1926 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs235017382
MGI SNP Detail
Alliance Variant
Chr6:29856543 Ahcyl2 Intron
Rr627660 1910 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253365035
MGI SNP Detail
Alliance Variant
Chr6:29856545 Ahcyl2 Intron
Rr627660 1908 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222068545
MGI SNP Detail
Alliance Variant
Chr6:29856618 Ahcyl2 Intron
Rr627660 1835 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583709621
MGI SNP Detail
Alliance Variant
Chr6:29856773 Ahcyl2 Intron
Rr627660 1680 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233670716
MGI SNP Detail
Alliance Variant
Chr6:29856914 Ahcyl2 Intron
Rr627660 1539 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262930881
MGI SNP Detail
Alliance Variant
Chr6:29856915 Ahcyl2 Intron
Rr627660 1538 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29643624
MGI SNP Detail
Alliance Variant
Chr6:29856981 Ahcyl2 Intron
Rr627660 1472 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs223856649
MGI SNP Detail
Alliance Variant
Chr6:29857014 Ahcyl2 Intron
Rr627660 1439 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29643626
MGI SNP Detail
Alliance Variant
Chr6:29857038 Ahcyl2 Intron
Rr627660 1415 bp proximal
SNP C/T C C C C C C C C C T C C C C
rs246382076
MGI SNP Detail
Alliance Variant
Chr6:29857058 Ahcyl2 Intron
Rr627660 1395 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29643628
MGI SNP Detail
Alliance Variant
Chr6:29857067 Ahcyl2 Intron
Rr627660 1386 bp proximal
SNP A/G G G G G G G A G G G A G G A A
rs218400480
MGI SNP Detail
Alliance Variant
Chr6:29857167 Ahcyl2 Intron
Rr627660 1286 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242998592
MGI SNP Detail
Alliance Variant
Chr6:29857193 Ahcyl2 Intron
Rr627660 1260 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260457976
MGI SNP Detail
Alliance Variant
Chr6:29857215 Ahcyl2 Intron
Rr627660 1238 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs227892519
MGI SNP Detail
Alliance Variant
Chr6:29857348 Ahcyl2 Intron
Rr627660 1105 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs244816253
MGI SNP Detail
Alliance Variant
Chr6:29857496 Ahcyl2 Intron
Rr627660 957 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs29643630
MGI SNP Detail
Alliance Variant
Chr6:29857778 Ahcyl2 Intron
Rr627660 675 bp proximal
SNP C/G G G G G G G C G G G C G G C G
rs229390806
MGI SNP Detail
Alliance Variant
Chr6:29857818 Ahcyl2 Intron
Rr627660 635 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254178771
MGI SNP Detail
Alliance Variant
Chr6:29857891 Ahcyl2 Intron
Rr627660 562 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212013156
MGI SNP Detail
Alliance Variant
Chr6:29857895 Ahcyl2 Intron
Rr627660 558 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229138018
MGI SNP Detail
Alliance Variant
Chr6:29857902 Ahcyl2 Intron
Rr627660 551 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246571076
MGI SNP Detail
Alliance Variant
Chr6:29858102 Ahcyl2 Intron
Rr627660 351 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216857612
MGI SNP Detail
Alliance Variant
Chr6:29858111 Ahcyl2 Intron
Rr627660 342 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233725956
MGI SNP Detail
Alliance Variant
Chr6:29858138 Ahcyl2 Intron
Rr627660 315 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587222169
MGI SNP Detail
Alliance Variant
Chr6:29858191 Ahcyl2 Intron
Rr627660 262 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258755931
MGI SNP Detail
Alliance Variant
Chr6:29858400 Ahcyl2 Intron
Rr627660 53 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29643632
MGI SNP Detail
Alliance Variant
Chr6:29858439 Ahcyl2 Intron
Rr627660 14 bp proximal
SNP A/G A A A A A A G A A A G A A A
rs580927678
MGI SNP Detail
Alliance Variant
Chr6:29858441 Ahcyl2 Intron
Rr627660 12 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261781402
MGI SNP Detail
Alliance Variant
Chr6:29858464 Ahcyl2 Intron
Rr627660 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs218455190
MGI SNP Detail
Alliance Variant
Chr6:29858485 Ahcyl2 Intron
Rr627660 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs243053519
MGI SNP Detail
Alliance Variant
Chr6:29858491 Ahcyl2 Intron
Rr627660 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G A
rs254683686
MGI SNP Detail
Alliance Variant
Chr6:29858494 Ahcyl2 Intron
Rr627660 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584363644
MGI SNP Detail
Alliance Variant
Chr6:29858532 Ahcyl2 Intron
Rr627660 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs587039141
MGI SNP Detail
Alliance Variant
Chr6:29858548 Ahcyl2 Intron
Rr627660 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247545502
MGI SNP Detail
Alliance Variant
Chr6:29858939 Ahcyl2 Intron
Rr627660 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262642445
MGI SNP Detail
Alliance Variant
Chr6:29859160 Ahcyl2 Intron
Rr627660 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229836876
MGI SNP Detail
Alliance Variant
Chr6:29859214 Ahcyl2 Intron
Rr627660 53 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241731795
MGI SNP Detail
Alliance Variant
Chr6:29859354 Ahcyl2 Intron
Rr627660 193 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253908312
MGI SNP Detail
Alliance Variant
Chr6:29859424 Ahcyl2 Intron
Ahcyl2 mRNA-UTR
Rr627660 263 bp distal
Rr627661 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229196463
MGI SNP Detail
Alliance Variant
Chr6:29859483 Ahcyl2 Intron
Ahcyl2 mRNA-UTR
Rr627660 322 bp distal
Rr627661 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246631649
MGI SNP Detail
Alliance Variant
Chr6:29859522 Ahcyl2 Intron
Ahcyl2 mRNA-UTR
Rr627660 361 bp distal
Rr627661 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215798458
MGI SNP Detail
Alliance Variant
Chr6:29859702 Ahcyl2 Intron
Ahcyl2 mRNA-UTR
Rr627660 541 bp distal
Rr627661 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231501313
MGI SNP Detail
Alliance Variant
Chr6:29859980 Ahcyl2 Intron
Rr627660 819 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257480527
MGI SNP Detail
Alliance Variant
Chr6:29860240 Ahcyl2 Intron
Rr627660 1079 bp distal
Rr627662 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214917063
MGI SNP Detail
Alliance Variant
Chr6:29860350 Ahcyl2 Intron
Rr627660 1189 bp distal
Rr627662 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238180783
MGI SNP Detail
Alliance Variant
Chr6:29860356 Ahcyl2 Intron
Rr627660 1195 bp distal
Rr627662 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250498817
MGI SNP Detail
Alliance Variant
Chr6:29860383 Ahcyl2 Intron
Rr627660 1222 bp distal
Rr627662 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212470317
MGI SNP Detail
Alliance Variant
Chr6:29860430 Ahcyl2 Intron
Rr627660 1269 bp distal
Rr627662 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236760918
MGI SNP Detail
Alliance Variant
Chr6:29860582 Ahcyl2 Intron
Rr627660 1421 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs254776713
MGI SNP Detail
Alliance Variant
Chr6:29860683 Ahcyl2 Intron
Rr627660 1522 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222145579
MGI SNP Detail
Alliance Variant
Chr6:29860717 Ahcyl2 Intron
Rr627660 1556 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6302339
MGI SNP Detail
Alliance Variant
Chr6:29860747 Ahcyl2 Intron
Rr627660 1586 bp distal
SNP C/T C T
rs6302781
MGI SNP Detail
Alliance Variant
Chr6:29860811 Ahcyl2 Intron
Rr627660 1650 bp distal
SNP C/T C C C C C C C T T C C C T C C T C
rs222329701
MGI SNP Detail
Alliance Variant
Chr6:29860881 Ahcyl2 Intron
Rr627660 1720 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs244674512
MGI SNP Detail
Alliance Variant
Chr6:29860914 Ahcyl2 Intron
Rr627660 1753 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29644595
MGI SNP Detail
Alliance Variant
Chr6:29860924 Ahcyl2 Intron
Rr627660 1763 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs222706591
MGI SNP Detail
Alliance Variant
Chr6:29861094 Ahcyl2 Intron
Rr627660 1933 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240821756
MGI SNP Detail
Alliance Variant
Chr6:29861108 Ahcyl2 Intron
Rr627660 1947 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29644597
MGI SNP Detail
Alliance Variant
Chr6:29861150 Ahcyl2 Intron
Rr627660 1989 bp distal
SNP C/T T T T T T T T T T T C T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 62 of 62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory