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Mouse SNP Summary
Symbol
Name
ID 		Rr627836
regulatory region 627836
MGI:8089968

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227043392
MGI SNP Detail
Alliance Variant		 Chr6:30737192 Cpgi17260 within coordinates of
Mest Intron
Rr627836 1985 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs250442649
MGI SNP Detail
Alliance Variant		 Chr6:30737194 Cpgi17260 within coordinates of
Mest Intron
Rr627836 1983 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs253971708
MGI SNP Detail
Alliance Variant		 Chr6:30737197 Cpgi17260 within coordinates of
Mest Intron
Rr627836 1980 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A T A A A A A A A T A A A A
rs221333533
MGI SNP Detail
Alliance Variant		 Chr6:30737200 Cpgi17260 within coordinates of
Mest Intron
Rr627836 1977 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240077249
MGI SNP Detail
Alliance Variant		 Chr6:30737280 Cpgi17260 within coordinates of
Mest Intron
Rr627836 1897 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs257640897
MGI SNP Detail
Alliance Variant		 Chr6:30737281 Cpgi17260 within coordinates of
Mest Intron
Rr627836 1896 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs229312593
MGI SNP Detail
Alliance Variant		 Chr6:30737466 Mest Intron
Rr627836 1711 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241438114
MGI SNP Detail
Alliance Variant		 Chr6:30737539 Mest Intron
Rr627836 1638 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs36261334
MGI SNP Detail
Alliance Variant		 Chr6:30737692 Mest Intron
Rr627834 within coordinates of
Rr627836 1485 bp proximal
 SNP C/T C C C C C T C C
rs233026167
MGI SNP Detail
Alliance Variant		 Chr6:30737706 Mest Intron
Rr627834 within coordinates of
Rr627836 1471 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245841095
MGI SNP Detail
Alliance Variant		 Chr6:30737736 Mest Intron
Rr627834 within coordinates of
Rr627836 1441 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T G T T T T T T G T T T T T T T G T T T T
rs257070257
MGI SNP Detail
Alliance Variant		 Chr6:30737800 Cpgi17261 within coordinates of
Mest Intron
Rr627834 within coordinates of
Rr627836 1377 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226085572
MGI SNP Detail
Alliance Variant		 Chr6:30737839 Cpgi17261 within coordinates of
Mest Intron
Rr627834 within coordinates of
Rr627836 1338 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243804796
MGI SNP Detail
Alliance Variant		 Chr6:30737868 Cpgi17261 within coordinates of
Mest Intron
Rr627834 within coordinates of
Rr627836 1309 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212540404
MGI SNP Detail
Alliance Variant		 Chr6:30737928 Cpgi17261 within coordinates of
Mest Intron
Rr627834 within coordinates of
Rr627836 1249 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235811173
MGI SNP Detail
Alliance Variant		 Chr6:30737999 Cpgi17261 within coordinates of
Mest Intron
Mest mRNA-UTR
Rr627834 within coordinates of
Rr627836 1178 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs254495253
MGI SNP Detail
Alliance Variant		 Chr6:30738041 Cpgi17261 within coordinates of
Mest Intron
Mest mRNA-UTR
Rr627834 within coordinates of
Rr627836 1136 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217791963
MGI SNP Detail
Alliance Variant		 Chr6:30738091 Cpgi17261 within coordinates of
Mest Intron
Mest mRNA-UTR
Mest Noncoding-Transcript-Variant
Rr627835 within coordinates of
Rr627836 1086 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs235840252
MGI SNP Detail
Alliance Variant		 Chr6:30738126 Cpgi17261 within coordinates of
Mest Intron
Mest mRNA-UTR
Mest Noncoding-Transcript-Variant
Rr627835 within coordinates of
Rr627836 1051 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs253887974
MGI SNP Detail
Alliance Variant		 Chr6:30738137 Cpgi17261 within coordinates of
Mest Intron
Mest mRNA-UTR
Mest Noncoding-Transcript-Variant
Rr627835 within coordinates of
Rr627836 1040 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs221234319
MGI SNP Detail
Alliance Variant		 Chr6:30738341 Cpgi17261 within coordinates of
Mest Intron
Mest Noncoding-Transcript-Variant
Mest Splice-Site
Rr627835 within coordinates of
Rr627836 836 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233386729
MGI SNP Detail
Alliance Variant		 Chr6:30738351 Cpgi17261 within coordinates of
Mest Intron
Mest Noncoding-Transcript-Variant
Rr627835 within coordinates of
Rr627836 826 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251550927
MGI SNP Detail
Alliance Variant		 Chr6:30738358 Cpgi17261 within coordinates of
Mest Intron
Mest Noncoding-Transcript-Variant
Rr627835 within coordinates of
Rr627836 819 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs38046205
MGI SNP Detail
Alliance Variant		 Chr6:30738428 Cpgi17261 within coordinates of
Mest Intron
Mest Noncoding-Transcript-Variant
Rr379135 within coordinates of
Rr627835 within coordinates of
Rr627836 749 bp proximal
 SNP A/C C C C C C A C C C A
rs244080897
MGI SNP Detail
Alliance Variant		 Chr6:30738472 Cpgi17261 within coordinates of
Mest Intron
Mest Noncoding-Transcript-Variant
Rr379135 within coordinates of
Rr627835 within coordinates of
Rr627836 705 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264518880
MGI SNP Detail
Alliance Variant		 Chr6:30738683 Mest Intron
Mest Noncoding-Transcript-Variant
Rr379135 within coordinates of
Rr627835 within coordinates of
Rr627836 494 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs38645150
MGI SNP Detail
Alliance Variant		 Chr6:30738709 Mest Intron
Mest Noncoding-Transcript-Variant
Rr379135 within coordinates of
Rr627835 within coordinates of
Rr627836 468 bp proximal
 SNP C/T T T T T C T C C
rs579059924
MGI SNP Detail
Alliance Variant		 Chr6:30738848 Mest Intron
Mest Noncoding-Transcript-Variant
Rr379135 within coordinates of
Rr627835 within coordinates of
Rr627836 329 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240187479
MGI SNP Detail
Alliance Variant		 Chr6:30739095 Mest Intron
Rr379135 within coordinates of
Rr627836 82 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257135471
MGI SNP Detail
Alliance Variant		 Chr6:30739096 Mest Intron
Rr379135 within coordinates of
Rr627836 81 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225950143
MGI SNP Detail
Alliance Variant		 Chr6:30739112 Mest Intron
Rr379135 within coordinates of
Rr627836 65 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs580937876
MGI SNP Detail
Alliance Variant		 Chr6:30739211 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs243813038
MGI SNP Detail
Alliance Variant		 Chr6:30739291 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs39519970
MGI SNP Detail
Alliance Variant		 Chr6:30739424 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP C/T T T T T T C T T
rs227300655
MGI SNP Detail
Alliance Variant		 Chr6:30739427 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs259735264
MGI SNP Detail
Alliance Variant		 Chr6:30739439 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217515846
MGI SNP Detail
Alliance Variant		 Chr6:30739445 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234580069
MGI SNP Detail
Alliance Variant		 Chr6:30739468 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584240131
MGI SNP Detail
Alliance Variant		 Chr6:30739473 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs37511830
MGI SNP Detail
Alliance Variant		 Chr6:30739498 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP A/G A A A A G A G A G
rs36857888
MGI SNP Detail
Alliance Variant		 Chr6:30739521 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP C/T T T T T C T T T T
rs233140026
MGI SNP Detail
Alliance Variant		 Chr6:30739736 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257468073
MGI SNP Detail
Alliance Variant		 Chr6:30739738 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs221516881
MGI SNP Detail
Alliance Variant		 Chr6:30739749 Mest Intron
Rr379135 within coordinates of
Rr627836 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs235033518
MGI SNP Detail
Alliance Variant		 Chr6:30739793 Mest Intron
Rr379135 within coordinates of
Rr627836 38 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs37144098
MGI SNP Detail
Alliance Variant		 Chr6:30739859 Mest Intron
Rr379135 within coordinates of
Rr627836 104 bp distal
 SNP C/T T T T T T C T T T
rs222009117
MGI SNP Detail
Alliance Variant		 Chr6:30739931 Mest Intron
Rr379135 within coordinates of
Rr627836 176 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs240249228
MGI SNP Detail
Alliance Variant		 Chr6:30739945 Mest Intron
Rr379135 within coordinates of
Rr627836 190 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257381298
MGI SNP Detail
Alliance Variant		 Chr6:30739950 Mest Intron
Rr379135 within coordinates of
Rr627836 195 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219954566
MGI SNP Detail
Alliance Variant		 Chr6:30739951 Mest Intron
Rr379135 within coordinates of
Rr627836 196 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237375501
MGI SNP Detail
Alliance Variant		 Chr6:30739964 Mest Intron
Rr379135 within coordinates of
Rr627836 209 bp distal
Rr627837 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581880369
MGI SNP Detail
Alliance Variant		 Chr6:30740047 Mest Intron
Rr379135 within coordinates of
Rr627836 292 bp distal
Rr627837 within coordinates of
 SNP C/T T T T T T T C T C T T T T T C T T T T C T T T T T T T T
rs261937908
MGI SNP Detail
Alliance Variant		 Chr6:30740215 Mest Intron
Rr379135 within coordinates of
Rr627836 460 bp distal
Rr627837 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs228190506
MGI SNP Detail
Alliance Variant		 Chr6:30740266 Mest Intron
Mest mRNA-UTR
Rr379135 within coordinates of
Rr627836 511 bp distal
Rr627837 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36318375
MGI SNP Detail
Alliance Variant		 Chr6:30740302 Mest Coding-NonSynonymous
Mest Intron
Rr379135 within coordinates of
Rr627836 547 bp distal
Rr627837 within coordinates of
 SNP A/G G G G G G A G G G G
rs265849918
MGI SNP Detail
Alliance Variant		 Chr6:30740304 Mest Coding-Synonymous
Mest Intron
Rr379135 within coordinates of
Rr627836 549 bp distal
Rr627837 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227811943
MGI SNP Detail
Alliance Variant		 Chr6:30740347 Mest Intron
Mest Splice-Site
Rr379135 within coordinates of
Rr627836 592 bp distal
Rr627837 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246254764
MGI SNP Detail
Alliance Variant		 Chr6:30740374 Mest Intron
Rr379135 within coordinates of
Rr627836 619 bp distal
Rr627837 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585507416
MGI SNP Detail
Alliance Variant		 Chr6:30740535 Mest Intron
Rr627836 780 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C
rs214157253
MGI SNP Detail
Alliance Variant		 Chr6:30740639 Mest Intron
Rr627836 884 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs226851128
MGI SNP Detail
Alliance Variant		 Chr6:30740640 Mest Intron
Rr627836 885 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs255655606
MGI SNP Detail
Alliance Variant		 Chr6:30740857 Mest Intron
Rr627836 1102 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213089702
MGI SNP Detail
Alliance Variant		 Chr6:30740860 Mest Intron
Rr627836 1105 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38492053
MGI SNP Detail
Alliance Variant		 Chr6:30740881 Mest Intron
Rr627836 1126 bp distal
 SNP A/G A A A A G A G
rs261170377
MGI SNP Detail
Alliance Variant		 Chr6:30740893 Mest Intron
Rr627836 1138 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216747205
MGI SNP Detail
Alliance Variant		 Chr6:30741000 Mest Intron
Rr627836 1245 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233597585
MGI SNP Detail
Alliance Variant		 Chr6:30741028 Mest Intron
Rr627836 1273 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs251412396
MGI SNP Detail
Alliance Variant		 Chr6:30741031 Mest Intron
Rr627836 1276 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220155974
MGI SNP Detail
Alliance Variant		 Chr6:30741041 Mest Intron
Rr627836 1286 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs39003248
MGI SNP Detail
Alliance Variant		 Chr6:30741107 Mest Intron
Rr627836 1352 bp distal
 SNP C/T C C C C T C C C
rs261468740
MGI SNP Detail
Alliance Variant		 Chr6:30741118 Mest Intron
Rr627836 1363 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220216409
MGI SNP Detail
Alliance Variant		 Chr6:30741454 Mest Intron
Rr627836 1699 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251322657
MGI SNP Detail
Alliance Variant		 Chr6:30741482 Mest Intron
Rr627836 1727 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G A G G G G
rs263985672
MGI SNP Detail
Alliance Variant		 Chr6:30741552 Mest Intron
Rr627836 1797 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227843884
MGI SNP Detail
Alliance Variant		 Chr6:30741584 Mest Intron
Rr627836 1829 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240166125
MGI SNP Detail
Alliance Variant		 Chr6:30741594 Mest Intron
Rr627836 1839 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258014056
MGI SNP Detail
Alliance Variant		 Chr6:30741597 Mest Intron
Rr627836 1842 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579262939
MGI SNP Detail
Alliance Variant		 Chr6:30741685 Mest Intron
Rr627836 1930 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 78 of 78
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/22/2025
MGI 6.24 		The Jackson Laboratory
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