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Mouse SNP Summary
Symbol
Name
ID
Rr628362
regulatory region 628362
MGI:8090494

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212019818
MGI SNP Detail
Alliance Variant
Chr6:34663957 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1981 bp proximal
SNP A/G A G
rs249696094
MGI SNP Detail
Alliance Variant
Chr6:34663982 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1956 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs222726658
MGI SNP Detail
Alliance Variant
Chr6:34663983 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1955 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240771250
MGI SNP Detail
Alliance Variant
Chr6:34663988 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1950 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs230321962
MGI SNP Detail
Alliance Variant
Chr6:34663998 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1940 bp proximal
SNP C/T C T
rs225493591
MGI SNP Detail
Alliance Variant
Chr6:34664042 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1896 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242561703
MGI SNP Detail
Alliance Variant
Chr6:34664068 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1870 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259382640
MGI SNP Detail
Alliance Variant
Chr6:34664069 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1869 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs250882330
MGI SNP Detail
Alliance Variant
Chr6:34664092 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1846 bp proximal
SNP A/T T A
rs220070246
MGI SNP Detail
Alliance Variant
Chr6:34664099 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1839 bp proximal
SNP A/T T A
rs262979227
MGI SNP Detail
Alliance Variant
Chr6:34664110 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1828 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228763285
MGI SNP Detail
Alliance Variant
Chr6:34664111 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1827 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249929317
MGI SNP Detail
Alliance Variant
Chr6:34664136 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1802 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C
rs218206125
MGI SNP Detail
Alliance Variant
Chr6:34664176 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1762 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs229380123
MGI SNP Detail
Alliance Variant
Chr6:34664190 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1748 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240347567
MGI SNP Detail
Alliance Variant
Chr6:34664194 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1744 bp proximal
SNP A/G A G
rs215050674
MGI SNP Detail
Alliance Variant
Chr6:34664206 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1732 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233496783
MGI SNP Detail
Alliance Variant
Chr6:34664243 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1695 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249582317
MGI SNP Detail
Alliance Variant
Chr6:34664280 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1658 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214700970
MGI SNP Detail
Alliance Variant
Chr6:34664369 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1569 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs236195787
MGI SNP Detail
Alliance Variant
Chr6:34664375 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1563 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs581748271
MGI SNP Detail
Alliance Variant
Chr6:34664451 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1487 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs586098772
MGI SNP Detail
Alliance Variant
Chr6:34664452 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1486 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs580390549
MGI SNP Detail
Alliance Variant
Chr6:34664454 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1484 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs255908962
MGI SNP Detail
Alliance Variant
Chr6:34664466 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1472 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225835635
MGI SNP Detail
Alliance Variant
Chr6:34664518 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1420 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs236151458
MGI SNP Detail
Alliance Variant
Chr6:34664671 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1267 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs252610830
MGI SNP Detail
Alliance Variant
Chr6:34664694 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1244 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs222124487
MGI SNP Detail
Alliance Variant
Chr6:34664714 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1224 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239152962
MGI SNP Detail
Alliance Variant
Chr6:34664718 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1220 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265363379
MGI SNP Detail
Alliance Variant
Chr6:34664875 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1063 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220860740
MGI SNP Detail
Alliance Variant
Chr6:34664877 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1061 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs245513364
MGI SNP Detail
Alliance Variant
Chr6:34664889 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1049 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs264058687
MGI SNP Detail
Alliance Variant
Chr6:34664895 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1043 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs229326164
MGI SNP Detail
Alliance Variant
Chr6:34664972 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 966 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A A
rs245413548
MGI SNP Detail
Alliance Variant
Chr6:34665038 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 900 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30326449
MGI SNP Detail
Alliance Variant
Chr6:34665046 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 892 bp proximal
SNP A/G A A G G G G A
rs49800888
MGI SNP Detail
Alliance Variant
Chr6:34665066 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 872 bp proximal
SNP A/G G G A
rs250533410
MGI SNP Detail
Alliance Variant
Chr6:34665075 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 863 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs49306497
MGI SNP Detail
Alliance Variant
Chr6:34665126 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 812 bp proximal
SNP C/G C C G
rs234638926
MGI SNP Detail
Alliance Variant
Chr6:34665137 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 801 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs254226515
MGI SNP Detail
Alliance Variant
Chr6:34665142 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 796 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217510764
MGI SNP Detail
Alliance Variant
Chr6:34665151 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 787 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236094783
MGI SNP Detail
Alliance Variant
Chr6:34665153 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 785 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs582438249
MGI SNP Detail
Alliance Variant
Chr6:34665194 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 744 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252518064
MGI SNP Detail
Alliance Variant
Chr6:34665259 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 679 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs221538560
MGI SNP Detail
Alliance Variant
Chr6:34665317 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 621 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs580090603
MGI SNP Detail
Alliance Variant
Chr6:34665329 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 609 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264757171
MGI SNP Detail
Alliance Variant
Chr6:34665342 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 596 bp proximal
SNP A/G A G
rs30959631
MGI SNP Detail
Alliance Variant
Chr6:34665513 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 425 bp proximal
SNP A/G A G G G G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30213750
MGI SNP Detail
Alliance Variant
Chr6:34665515 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 423 bp proximal
SNP C/T C T T T T C
rs242593604
MGI SNP Detail
Alliance Variant
Chr6:34665557 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 381 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30567992
MGI SNP Detail
Alliance Variant
Chr6:34665605 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 333 bp proximal
SNP A/G A G G G G A
rs223105758
MGI SNP Detail
Alliance Variant
Chr6:34665645 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 293 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs239276156
MGI SNP Detail
Alliance Variant
Chr6:34665669 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 269 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs258184100
MGI SNP Detail
Alliance Variant
Chr6:34665686 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 252 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs225444496
MGI SNP Detail
Alliance Variant
Chr6:34665727 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 211 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs256534918
MGI SNP Detail
Alliance Variant
Chr6:34665730 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 208 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262714345
MGI SNP Detail
Alliance Variant
Chr6:34665766 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 172 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228027317
MGI SNP Detail
Alliance Variant
Chr6:34665803 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 135 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs249853612
MGI SNP Detail
Alliance Variant
Chr6:34665818 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 120 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs216633433
MGI SNP Detail
Alliance Variant
Chr6:34665824 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 114 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs236362840
MGI SNP Detail
Alliance Variant
Chr6:34665833 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 105 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs246126263
MGI SNP Detail
Alliance Variant
Chr6:34665842 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 96 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215639466
MGI SNP Detail
Alliance Variant
Chr6:34665898 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 40 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235959971
MGI SNP Detail
Alliance Variant
Chr6:34665915 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 23 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262343990
MGI SNP Detail
Alliance Variant
Chr6:34665929 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 9 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212279367
MGI SNP Detail
Alliance Variant
Chr6:34665973 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237450260
MGI SNP Detail
Alliance Variant
Chr6:34666059 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs260501781
MGI SNP Detail
Alliance Variant
Chr6:34666100 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs223036213
MGI SNP Detail
Alliance Variant
Chr6:34666301 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 36 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239607564
MGI SNP Detail
Alliance Variant
Chr6:34666348 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 83 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252000181
MGI SNP Detail
Alliance Variant
Chr6:34666402 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 137 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs219476112
MGI SNP Detail
Alliance Variant
Chr6:34666441 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 176 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A G A
rs244306326
MGI SNP Detail
Alliance Variant
Chr6:34666456 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 191 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264706761
MGI SNP Detail
Alliance Variant
Chr6:34666460 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 195 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229032343
MGI SNP Detail
Alliance Variant
Chr6:34666481 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 216 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs244841579
MGI SNP Detail
Alliance Variant
Chr6:34666505 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 240 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs260544002
MGI SNP Detail
Alliance Variant
Chr6:34666517 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 252 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs229195985
MGI SNP Detail
Alliance Variant
Chr6:34666599 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 334 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246499950
MGI SNP Detail
Alliance Variant
Chr6:34666603 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 338 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215591227
MGI SNP Detail
Alliance Variant
Chr6:34666605 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 340 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229858093
MGI SNP Detail
Alliance Variant
Chr6:34666617 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 352 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251207255
MGI SNP Detail
Alliance Variant
Chr6:34666752 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 487 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs211875820
MGI SNP Detail
Alliance Variant
Chr6:34666753 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 488 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs583507903
MGI SNP Detail
Alliance Variant
Chr6:34666787 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 522 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235268296
MGI SNP Detail
Alliance Variant
Chr6:34666824 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 559 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs252789291
MGI SNP Detail
Alliance Variant
Chr6:34666875 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 610 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217539723
MGI SNP Detail
Alliance Variant
Chr6:34666944 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 679 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233184851
MGI SNP Detail
Alliance Variant
Chr6:34666948 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 683 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252308488
MGI SNP Detail
Alliance Variant
Chr6:34666976 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 711 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226894716
MGI SNP Detail
Alliance Variant
Chr6:34666997 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 732 bp distal
SNP C/T T C
rs258522932
MGI SNP Detail
Alliance Variant
Chr6:34667120 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 855 bp distal
SNP C/T C T
rs246919993
MGI SNP Detail
Alliance Variant
Chr6:34667448 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1183 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G A G G G G G G A G G G G G G G G G
rs586922272
MGI SNP Detail
Alliance Variant
Chr6:34667515 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1250 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs579657450
MGI SNP Detail
Alliance Variant
Chr6:34667528 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1263 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255585101
MGI SNP Detail
Alliance Variant
Chr6:34667543 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1278 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs221255071
MGI SNP Detail
Alliance Variant
Chr6:34667551 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1286 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247709151
MGI SNP Detail
Alliance Variant
Chr6:34667584 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1319 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260518979
MGI SNP Detail
Alliance Variant
Chr6:34667611 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628362 1346 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 100 of 117

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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